Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 8.9e-81 303.5 150 100.0
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 5.2e-73 277.7 149 89.9
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 8.9e-73 276.9 149 89.9
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 8.9e-73 276.9 150 90.0
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 2.0e-64 249.2 150 80.7
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 5.8e-64 247.7 149 79.2
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 5.8e-64 247.7 151 80.1
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 9.9e-64 246.9 152 80.3
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 2.2e-63 245.7 150 80.7
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 3.7e-63 245.0 150 80.0
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 1.1e-62 243.4 148 81.1
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 1.4e-62 243.0 150 77.3
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 2.1e-61 239.2 151 78.1
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 1.3e-60 236.5 150 76.0
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 2.5e-59 232.3 149 75.2
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.3e-59 231.9 149 77.2
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 7.3e-59 230.7 150 76.7
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 1.2e-58 229.9 146 76.0
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.2e-58 229.9 149 76.5
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.6e-58 229.6 151 76.2
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.6e-58 229.6 150 76.0
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 3.6e-58 228.4 150 75.3
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 4.7e-58 228.0 150 75.3
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 1.4e-57 226.5 149 75.8
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 2.4e-57 225.7 144 77.1
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 4.0e-57 224.9 149 73.2
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 4.0e-57 224.9 150 75.3
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 4.0e-57 224.9 150 74.7
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 5.2e-57 224.6 150 74.0
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 6.8e-57 224.2 149 72.5
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 6.8e-57 224.2 149 72.5
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 8.9e-57 223.8 149 72.5
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 1.5e-56 223.0 149 74.5
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 2.0e-56 222.6 149 72.5
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 2.6e-56 222.2 149 73.2
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 3.4e-56 221.9 149 72.5
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 3.4e-56 221.9 149 72.5
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 3.4e-56 221.9 149 72.5
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 5.8e-56 221.1 151 74.8
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 7.6e-56 220.7 145 74.5
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 9.9e-56 220.3 150 70.7
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 9.9e-56 220.3 144 73.6
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 1.7e-55 219.5 149 71.1
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 1.7e-55 219.5 149 71.1
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 2.2e-55 219.2 150 71.3
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 2.2e-55 219.2 151 72.8
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 2.2e-55 219.2 150 70.0
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 2.9e-55 218.8 150 72.7
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 2.9e-55 218.8 150 70.0
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 6.4e-55 217.6 149 72.5
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 6.4e-55 217.6 149 72.5
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 6.4e-55 217.6 149 69.8
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 8.4e-55 217.2 149 70.5
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 1.1e-54 216.9 144 72.9
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 1.1e-54 216.9 144 72.9
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 1.1e-54 216.9 144 72.9
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 1.4e-54 216.5 150 73.3
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 1.9e-54 216.1 150 70.7
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 1.9e-54 216.1 149 70.5
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 4.1e-54 214.9 144 72.2
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 4.6e-53 211.5 151 70.9
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 4.6e-53 211.5 145 73.1
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 6.0e-53 211.1 175 63.4
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 7.8e-53 210.7 151 72.2
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 1.0e-52 210.3 137 72.3
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 3.9e-52 208.4 152 71.1
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 3.9e-52 208.4 150 68.0
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 6.6e-52 207.6 114 78.9
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 6.6e-52 207.6 116 79.3
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 6.6e-52 207.6 115 81.7
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.1e-51 206.8 152 70.4
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 1.1e-51 206.8 146 69.9
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 1.5e-51 206.5 150 67.3
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.9e-51 206.1 152 69.7
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 2.5e-51 205.7 145 69.0
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 2.5e-51 205.7 153 70.6
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 4.3e-51 204.9 147 70.7
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 5.6e-51 204.5 152 69.1
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 7.3e-51 204.1 152 69.1
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 7.3e-51 204.1 150 67.3
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 9.6e-51 203.8 151 69.5
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 9.6e-51 203.8 152 69.7
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 1.2e-50 203.4 147 70.7
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 1.6e-50 203.0 150 67.3
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 3.6e-50 201.8 151 70.2
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 6.2e-50 201.1 149 65.1
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 8.1e-50 200.7 137 70.8
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 1.4e-49 199.9 146 67.8
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 2.4e-49 199.1 152 69.1
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 2.4e-49 199.1 144 68.8
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 3.1e-49 198.7 120 77.5
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 4.0e-49 198.4 116 79.3
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 5.2e-49 198.0 149 63.1
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 2.0e-48 196.1 119 75.6
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 4.4e-48 194.9 150 66.0
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 4.4e-48 194.9 152 64.5
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 9.9e-48 193.7 121 76.9
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 3.8e-47 191.8 120 75.0
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 2.4e-46 189.1 144 66.7
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 7.1e-46 187.6 146 64.4
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 1.6e-45 186.4 113 73.5
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 7.8e-45 184.1 148 64.9
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 5.1e-44 181.4 146 64.4
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 3.1e-41 172.2 91 81.3
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 4.0e-41 171.8 149 59.7
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 4.0e-41 171.8 151 59.6
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 5.3e-41 171.4 150 63.3
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 2.6e-40 169.1 151 61.6
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 3.4e-40 168.7 120 71.7
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 9.9e-40 167.2 140 58.6
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 1.7e-39 166.4 86 83.7
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 2.9e-39 165.6 115 73.9
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 1.1e-38 163.7 121 69.4
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.9e-38 162.9 84 85.7
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 9.3e-38 160.6 130 60.8
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 6.0e-37 157.9 118 70.3
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 4.3e-35 151.8 90 76.7
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 7.4e-35 151.0 117 61.5
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.5e-32 141.7 119 65.5
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 9.9e-32 140.6 120 63.3
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 6.4e-31 137.9 123 63.4
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 2.3e-28 129.4 119 59.7
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 5.1e-28 128.3 89 67.4
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 2.5e-27 125.9 91 71.4
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 9.6e-27 124.0 149 48.3
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 6.2e-26 121.3 115 62.6
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 3.1e-25 119.0 93 67.7
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 4.6e-21 105.1 135 43.7
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 3.7e-18 95.5 139 38.1
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 5.0e-15 85.1 73 64.4
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 1.4e-14 83.6 158 38.6
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 9.3e-14 80.9 87 56.3
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 5.7e-11 71.6 79 58.2
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 2.4e-09 66.2 79 51.9


User provided reference genes

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