Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 1.0e-82 310.1 163 100.0
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 3.1e-79 298.5 163 96.3
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 4.7e-43 178.3 171 64.9
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 3.4e-41 172.2 156 67.3
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 4.4e-41 171.8 156 67.3
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 1.3e-40 170.2 156 66.7
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 1.3e-40 170.2 156 66.7
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 7.0e-39 164.5 168 64.9
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 1.6e-38 163.3 158 65.2
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 1.3e-37 160.2 162 63.6
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 1.7e-37 159.8 159 61.0
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 2.2e-37 159.5 173 61.8
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 1.6e-35 153.3 159 59.1
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 3.6e-35 152.1 163 55.8
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 4.7e-35 151.8 162 62.3
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 4.0e-34 148.7 157 57.3
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 4.0e-34 148.7 157 57.3
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 4.0e-34 148.7 163 57.7
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 1.2e-33 147.1 119 65.5
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 2.0e-33 146.4 179 57.0
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 2.0e-33 146.4 169 58.6
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 2.6e-33 146.0 167 58.7
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 5.7e-33 144.8 109 70.6
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 9.8e-33 144.1 145 60.0
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 1.3e-32 143.7 173 54.9
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 1.3e-32 143.7 180 51.1
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 1.3e-32 143.7 180 51.1
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 1.7e-32 143.3 164 57.3
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 2.2e-32 142.9 168 57.1
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.8e-32 142.5 167 58.7
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 4.8e-32 141.7 149 60.4
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 4.8e-32 141.7 121 64.5
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 6.3e-32 141.4 159 57.9
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 6.3e-32 141.4 164 57.9
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 1.1e-31 140.6 176 56.8
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 2.4e-31 139.4 167 58.1
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 3.1e-31 139.0 101 74.3
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 7.0e-31 137.9 166 54.8
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 2.0e-30 136.3 157 53.5
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 2.0e-30 136.3 146 58.9
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 4.5e-30 135.2 164 57.3
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 5.9e-30 134.8 145 55.2
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 5.9e-30 134.8 166 56.0
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 7.7e-30 134.4 147 55.1
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 1.3e-29 133.7 164 53.7
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 2.3e-29 132.9 85 80.0
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.3e-29 132.9 151 56.3
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 3.8e-29 132.1 160 51.2
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 5.0e-29 131.7 166 56.0
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 5.0e-29 131.7 106 68.9
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 6.6e-29 131.3 83 75.9
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 6.6e-29 131.3 148 52.7
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 8.6e-29 131.0 170 57.1
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 1.1e-28 130.6 176 53.4
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 2.5e-28 129.4 160 55.6
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 2.5e-28 129.4 84 71.4
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 3.3e-28 129.0 145 54.5
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 4.2e-28 128.6 164 51.8
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 4.2e-28 128.6 97 68.0
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 4.2e-28 128.6 140 52.9
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 5.5e-28 128.3 140 55.7
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 1.6e-27 126.7 156 53.8
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 2.8e-27 125.9 168 54.2
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 2.8e-27 125.9 126 53.2
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 1.0e-26 124.0 90 74.4
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 1.4e-26 123.6 133 56.4
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 2.3e-26 122.9 158 53.2
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 3.0e-26 122.5 162 51.9
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 6.8e-26 121.3 163 53.4
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 8.9e-26 120.9 160 51.2
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 1.2e-25 120.6 173 50.3
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 2.0e-25 119.8 172 49.4
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 3.4e-25 119.0 221 37.6
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 9.8e-25 117.5 119 58.0
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 1.3e-24 117.1 163 52.8
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 2.2e-24 116.3 155 53.5
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 2.8e-24 115.9 91 65.9
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 3.7e-24 115.5 155 53.5
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 3.7e-24 115.5 155 53.5
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 3.7e-24 115.5 155 53.5
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 3.7e-24 115.5 161 48.4
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 3.2e-23 112.5 155 46.5
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 5.4e-23 111.7 156 51.3
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 1.2e-22 110.5 168 49.4
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 2.7e-22 109.4 168 50.0
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 6.6e-21 104.8 91 64.8
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 8.0e-19 97.8 93 59.1
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 1.4e-18 97.1 93 59.1
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 2.6e-17 92.8 136 48.5
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 7.5e-17 91.3 44 79.5
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 7.5e-17 91.3 171 44.4
Haze_23611 Corylus avellana HOM05D007375 ORTHO05D009293 1.6e-14 83.6 119 50.4
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 2.7e-14 82.8 78 57.7
Prupe.6G149200 Prunus persica HOM05D007375 ORTHO05D009293 9.5e-12 74.3 101 52.5
Aa31LG4G13610 Aethionema arabicum HOM05D007375 ORTHO05D009293 1.6e-11 73.6 119 45.4
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 2.0e-09 66.6 114 47.4
Glyma.14G019800 Glycine max HOM05D007375 ORTHO05D009293 3.4e-09 65.9 53 62.3
COL.COLO4_25390 Corchorus olitorius HOM05D007375 ORTHO05D009293 1.7e-08 63.5 31 83.9
Dinv18872 Davidia involucrata HOM05D007375 ORTHO05D009293 8.3e-08 61.2 36 83.3


User provided reference genes

Program Settings