Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 4.1e-66 254.6 130 100.0
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 6.6e-56 220.7 130 86.9
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 1.3e-35 153.3 134 66.4
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 3.7e-35 151.8 134 63.4
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 1.1e-34 150.2 130 64.6
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 4.1e-34 148.3 129 62.0
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 5.4e-34 147.9 132 64.4
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 5.4e-34 147.9 133 60.2
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 7.0e-34 147.5 134 61.9
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 7.0e-34 147.5 131 64.1
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 1.6e-33 146.4 136 62.5
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 2.1e-33 146.0 119 62.2
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 3.5e-33 145.2 98 75.5
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 4.6e-33 144.8 125 60.8
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 4.6e-33 144.8 95 74.7
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 4.6e-33 144.8 129 60.5
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 6.0e-33 144.4 132 57.6
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 6.0e-33 144.4 133 59.4
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 7.8e-33 144.1 132 60.6
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 7.8e-33 144.1 133 60.2
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 1.0e-32 143.7 130 60.0
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 1.0e-32 143.7 130 60.8
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 1.3e-32 143.3 136 61.0
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 1.3e-32 143.3 132 64.4
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 2.3e-32 142.5 129 62.0
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 2.3e-32 142.5 117 63.2
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 3.0e-32 142.1 133 58.6
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 3.0e-32 142.1 135 60.7
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 3.0e-32 142.1 132 60.6
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 3.0e-32 142.1 129 58.9
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 5.1e-32 141.4 134 61.9
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 6.6e-32 141.0 132 59.1
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 8.6e-32 140.6 109 68.8
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 8.6e-32 140.6 109 68.8
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 8.6e-32 140.6 130 60.0
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.1e-31 140.2 133 60.9
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 1.9e-31 139.4 135 57.8
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 3.3e-31 138.7 131 61.8
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 4.3e-31 138.3 130 57.7
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 4.3e-31 138.3 130 56.9
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 1.2e-30 136.7 75 85.3
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 2.8e-30 135.6 96 69.8
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 2.8e-30 135.6 133 54.9
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 3.6e-30 135.2 130 57.7
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 3.6e-30 135.2 130 56.9
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 3.6e-30 135.2 132 58.3
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 4.7e-30 134.8 130 56.9
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 4.7e-30 134.8 132 55.3
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 6.2e-30 134.4 130 56.9
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 8.1e-30 134.0 132 55.3
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 8.1e-30 134.0 131 58.0
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 1.1e-29 133.7 77 75.3
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 1.1e-29 133.7 118 59.3
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 1.1e-29 133.7 130 54.6
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 1.1e-29 133.7 130 54.6
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 1.1e-29 133.7 81 74.1
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 1.4e-29 133.3 77 79.2
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 1.4e-29 133.3 142 52.8
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 1.8e-29 132.9 128 54.7
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 2.3e-29 132.5 81 72.8
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 2.3e-29 132.5 81 72.8
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 3.1e-29 132.1 132 58.3
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 5.2e-29 131.3 80 73.8
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 8.9e-29 130.6 104 64.4
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 8.9e-29 130.6 139 51.8
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 8.9e-29 130.6 160 52.5
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 1.2e-28 130.2 73 78.1
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 1.2e-28 130.2 130 55.4
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 1.2e-28 130.2 98 65.3
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 1.2e-28 130.2 130 55.4
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 1.5e-28 129.8 133 57.9
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 2.0e-28 129.4 82 72.0
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 2.6e-28 129.0 130 53.1
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 2.6e-28 129.0 130 53.8
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 2.6e-28 129.0 130 53.1
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 3.4e-28 128.6 130 53.1
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 3.4e-28 128.6 130 53.8
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 3.4e-28 128.6 130 53.1
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 3.4e-28 128.6 130 53.1
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 4.4e-28 128.3 130 53.1
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 5.8e-28 127.9 120 57.5
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 5.8e-28 127.9 132 56.8
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 5.8e-28 127.9 98 64.3
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 5.8e-28 127.9 79 77.2
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 7.5e-28 127.5 74 78.4
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 7.5e-28 127.5 126 55.6
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 1.3e-27 126.7 74 75.7
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 2.2e-27 125.9 100 64.0
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 2.2e-27 125.9 92 66.3
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 3.7e-27 125.2 127 55.9
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 1.9e-26 122.9 96 65.6
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 1.2e-25 120.2 111 55.0
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 1.0e-24 117.1 118 55.1
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 8.6e-24 114.0 109 51.4
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 3.3e-23 112.1 124 56.5
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 7.3e-23 110.9 101 53.5
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 3.1e-21 105.5 56 83.9
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 6.8e-21 104.4 68 63.2
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 1.5e-20 103.2 96 54.2
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 4.4e-20 101.7 112 47.3
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 4.4e-20 101.7 93 59.1
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 4.4e-20 101.7 112 46.4
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 6.4e-19 97.8 64 68.8
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 8.4e-19 97.4 108 50.0
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 7.1e-18 94.4 71 56.3
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 2.4e-13 79.3 99 46.5
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 5.8e-12 74.7 98 44.9
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 1.9e-10 69.7 39 76.9
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 7.1e-10 67.8 37 83.8
Lsat_1_v5_gn_6_53880 Lactuca sativa HOM05D007267 ORTHO05D009053 1.1e-07 60.5 59 50.8
arahy.Tifrunner.gnm1.ann1.RKVJ8T Arachis hypogaea HOM05D007267 ORTHO05D009053 5.6e-07 58.2 32 78.1
Lsat_1_v5_gn_5_53160 Lactuca sativa HOM05D007267 ORTHO05D009053 1.3e-06 57.0 58 48.3
Os07g0164200 Oryza sativa ssp. japonica HOM05D007267 ORTHO05D009053 2.8e-06 55.8 82 39.0


User provided reference genes

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