Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G153500 Populus trichocarpa HOM05D013056 ORTHO05D015181 1.4e-75 286.2 143 100.0
Potri.009G153700 Populus trichocarpa HOM05D013056 ORTHO05D015181 5.0e-73 277.7 142 96.5
Sabra01G0128400 Salix brachista HOM05D013056 ORTHO05D015181 1.2e-50 203.4 124 79.0
Sabra16G0266600 Salix brachista HOM05D013056 ORTHO05D015181 7.2e-48 194.1 124 78.2
Sabra16G0266500 Salix brachista HOM05D013056 ORTHO05D015181 9.4e-48 193.7 124 78.2
Sabra16G0266700 Salix brachista HOM05D013056 ORTHO05D015181 1.2e-47 193.4 122 78.7
Sabra16G0266800 Salix brachista HOM05D013056 ORTHO05D015181 4.7e-47 191.4 124 77.4
Sabra16G0266300 Salix brachista HOM05D013056 ORTHO05D015181 4.0e-46 188.3 123 76.4
Sabra16G0266400 Salix brachista HOM05D013056 ORTHO05D015181 4.0e-46 188.3 124 76.6
Sabra16G0276100 Salix brachista HOM05D013056 ORTHO05D015181 2.2e-44 182.6 125 75.2
Sabra16G0276200 Salix brachista HOM05D013056 ORTHO05D015181 2.8e-44 182.2 124 75.0
Sabra16G0280500 Salix brachista HOM05D013056 ORTHO05D015181 3.7e-44 181.8 125 73.6
Sabra16G0280600 Salix brachista HOM05D013056 ORTHO05D015181 1.1e-43 180.3 123 74.8
Atru.chr7.1960 Acer truncatum HOM05D001603 ORTHO05D001393 7.8e-18 94.4 126 42.9
Atru.chr7.1961 Acer truncatum HOM05D001603 ORTHO05D001393 1.0e-17 94.0 125 43.2
Atru.chr7.2004 Acer truncatum HOM05D001603 ORTHO05D001393 6.6e-17 91.3 126 42.1
Atru.chr11.1514 Acer truncatum HOM05D001603 ORTHO05D001393 3.3e-16 89.0 131 40.5
Thecc.09G137000 Theobroma cacao HOM05D001603 ORTHO05D001393 7.8e-10 67.8 125 33.6
Carub.0008s1404 Capsella rubella HOM05D001603 ORTHO05D001393 3.0e-09 65.9 89 36.0
Carub.0008s1450 Capsella rubella HOM05D001603 ORTHO05D001393 3.0e-09 65.9 89 37.1
Aqoxy6G02757 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 1.1e-08 63.9 75 41.3
Aqoxy6G02756 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 4.3e-08 62.0 67 41.8
Aqoxy6G02760 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 5.6e-08 61.6 79 41.8
Carub.0008s1421 Capsella rubella HOM05D001603 ORTHO05D001393 9.5e-08 60.8 91 34.1
Nn2g12175 Nelumbo nucifera HOM05D001603 ORTHO05D001393 2.8e-07 59.3 117 32.5
Thecc.09G136900 Theobroma cacao HOM05D001603 ORTHO05D001393 4.7e-07 58.5 86 34.9
CAN.G184.54 Capsicum annuum HOM05D001603 ORTHO05D001393 1.4e-06 57.0 85 37.6
Migut.K00395 Erythranthe guttata HOM05D001603 ORTHO05D001393 3.1e-06 55.8 83 39.8
AT5G54062 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.0e-06 55.5 97 33.0
CAN.G184.52 Capsicum annuum HOM05D001603 ORTHO05D001393 4.0e-06 55.5 84 36.9
CARHR267040 Cardamine hirsuta HOM05D001603 ORTHO05D001393 4.0e-06 55.5 76 34.2
BcaB01g04253 Brassica carinata HOM05D001603 ORTHO05D001393 5.2e-06 55.1 104 32.7
Aqoxy1G00790 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 6.8e-06 54.7 86 36.0


User provided reference genes

Program Settings