Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 1.9e-286 988.4 488 100.0
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 1.7e-226 789.3 492 81.1
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 3.3e-225 785.0 488 80.9
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 6.0e-219 764.2 489 78.9
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 1.3e-218 763.1 487 78.9
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 1.2e-216 756.5 489 78.5
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.6e-216 756.1 487 78.0
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 1.1e-215 753.4 475 77.5
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.3e-215 752.3 487 77.6
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 3.1e-215 751.9 483 78.5
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 2.0e-214 749.2 483 78.1
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 4.4e-214 748.0 485 77.5
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 8.4e-213 743.8 487 74.7
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 3.5e-211 738.4 508 72.8
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 7.8e-211 737.3 525 72.8
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 3.9e-210 734.9 467 77.1
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 6.6e-210 734.2 484 76.2
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 1.1e-209 733.4 484 75.6
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 4.7e-208 728.0 488 76.0
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 1.1e-207 726.9 469 77.8
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 1.1e-207 726.9 438 80.8
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 1.8e-207 726.1 435 81.8
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 3.1e-207 725.3 452 78.5
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 7.6e-206 720.7 459 76.7
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 3.8e-205 718.4 492 72.2
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 3.2e-204 715.3 486 72.8
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 5.4e-204 714.5 446 79.8
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 2.1e-203 712.6 424 80.7
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 2.7e-203 712.2 440 78.6
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 4.6e-203 711.4 422 81.8
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 7.8e-203 710.7 422 80.8
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 1.3e-202 709.9 435 80.9
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 6.6e-202 707.6 474 73.8
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 1.9e-201 706.1 464 74.4
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 3.3e-201 705.3 476 73.1
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 9.6e-201 703.7 486 73.7
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 1.6e-200 703.0 430 78.1
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 2.8e-200 702.2 500 71.0
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 3.6e-200 701.8 486 71.4
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 8.1e-200 700.7 474 72.8
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 1.4e-199 699.9 477 72.5
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 5.3e-199 698.0 474 72.6
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 5.3e-199 698.0 479 71.8
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 1.2e-198 696.8 443 77.2
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 4.4e-198 694.9 466 72.5
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 5.8e-198 694.5 452 75.4
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 7.6e-198 694.1 485 72.0
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 7.6e-198 694.1 463 72.8
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 7.6e-198 694.1 452 73.9
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 2.2e-197 692.6 431 76.8
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 1.9e-196 689.5 437 76.9
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 2.4e-196 689.1 449 75.1
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 3.2e-196 688.7 447 75.4
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 1.6e-195 686.4 567 64.6
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 6.0e-195 684.5 464 73.1
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 6.0e-195 684.5 469 71.4
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.0e-194 683.7 421 78.4
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 3.9e-194 681.8 479 70.8
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 3.9e-194 681.8 429 76.9
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 8.7e-194 680.6 449 73.9
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 1.1e-193 680.2 423 77.3
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 2.5e-193 679.1 438 77.2
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 1.8e-191 672.9 378 86.5
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 1.0e-186 657.1 479 70.4
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 8.7e-186 654.1 489 68.9
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 1.9e-185 652.9 380 83.7
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 7.4e-185 651.0 435 74.3
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 4.8e-184 648.3 384 82.3
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 1.1e-183 647.1 384 81.8
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 5.3e-183 644.8 497 67.2
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 3.4e-182 642.1 438 72.8
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 1.0e-181 640.6 386 79.5
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 1.3e-176 623.6 383 77.5
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 3.7e-176 622.1 438 73.7
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 6.9e-175 617.8 386 77.7
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 1.1e-172 610.5 491 64.4
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 3.2e-172 609.0 339 87.0
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 1.8e-170 603.2 446 67.5
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 2.5e-169 599.4 479 65.6
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 4.3e-169 598.6 423 70.4
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 2.2e-165 586.3 487 63.9
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 2.9e-165 585.9 418 68.9
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 2.3e-162 576.2 433 67.2
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 2.0e-161 573.2 423 67.6
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 5.3e-159 565.1 461 64.0
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 4.2e-156 555.4 434 62.0
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 6.1e-155 551.6 353 75.6
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 2.0e-153 546.6 420 63.1
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 5.9e-150 535.0 326 77.6
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 8.0e-147 524.6 313 80.8
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 2.9e-133 479.6 434 57.6
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 4.9e-128 462.2 481 52.6
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 5.7e-121 438.7 477 49.9
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 2.3e-114 416.8 296 68.6
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 1.1e-103 381.3 246 73.6
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 2.3e-101 373.6 438 47.3
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 5.8e-97 359.0 314 61.1
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 2.2e-96 357.1 314 61.1
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 1.8e-90 337.4 202 78.2
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 9.3e-87 325.1 226 74.3
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 7.8e-86 322.0 262 60.3
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 2.9e-72 276.9 211 67.3
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 2.3e-69 267.3 304 53.6
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 4.8e-67 259.6 179 71.5
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 6.3e-59 232.6 449 37.4
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 8.2e-59 232.3 165 69.1
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 7.2e-39 166.0 115 66.1
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 4.4e-36 156.8 93 79.6
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 3.8e-32 143.7 85 83.5
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 1.5e-28 131.7 88 73.9
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 5.0e-16 90.1 58 70.7
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 4.4e-12 77.0 43 88.4
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 5.9e-09 66.6 98 38.8


User provided reference genes

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