Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 2.3e-111 405.6 205 100.0
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 1.5e-91 339.7 198 86.9
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 6.0e-80 301.2 209 73.2
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 2.5e-78 295.8 207 72.9
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 4.9e-74 281.6 212 70.8
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 8.4e-74 280.8 213 69.0
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 4.2e-73 278.5 212 68.9
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 4.6e-72 275.0 208 69.2
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 1.8e-71 273.1 201 68.7
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 5.1e-71 271.6 209 68.4
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 6.7e-71 271.2 212 65.1
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 1.5e-70 270.0 209 67.0
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 4.8e-69 265.0 209 62.7
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 6.2e-69 264.6 218 62.4
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 8.1e-69 264.2 213 64.8
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 1.4e-68 263.5 217 62.7
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 2.4e-68 262.7 212 67.5
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 2.4e-68 262.7 204 64.7
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 3.1e-68 262.3 210 67.6
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 6.9e-68 261.2 219 63.0
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 6.9e-68 261.2 204 65.2
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 2.0e-67 259.6 213 62.4
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 3.4e-67 258.8 231 62.3
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 7.6e-67 257.7 217 62.7
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 7.6e-67 257.7 207 62.8
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 1.0e-66 257.3 209 64.1
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 3.8e-66 255.4 211 64.0
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 6.5e-66 254.6 209 65.1
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 1.1e-65 253.8 210 63.8
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 1.1e-65 253.8 204 62.7
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 1.4e-65 253.4 212 62.3
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 5.5e-65 251.5 205 61.0
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 1.2e-64 250.4 204 62.7
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.6e-64 250.0 211 63.0
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 2.1e-64 249.6 205 60.0
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 2.1e-64 249.6 205 65.4
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 2.7e-64 249.2 204 61.3
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 2.7e-64 249.2 174 69.5
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.0e-63 247.3 205 65.9
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 1.3e-63 246.9 206 63.1
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 1.3e-63 246.9 237 59.9
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 1.8e-63 246.5 206 64.1
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 3.0e-63 245.7 205 60.0
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 8.7e-63 244.2 206 63.1
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 1.1e-62 243.8 210 63.8
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 1.5e-62 243.4 205 60.0
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 1.5e-62 243.4 189 63.0
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 4.3e-62 241.9 206 60.7
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 7.4e-62 241.1 212 59.0
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 7.4e-62 241.1 185 64.9
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 1.6e-61 240.0 211 59.2
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 2.8e-61 239.2 223 58.7
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 2.8e-61 239.2 217 57.1
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 2.8e-61 239.2 205 61.0
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 4.8e-61 238.4 206 59.7
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 8.2e-61 237.7 203 60.6
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 1.1e-60 237.3 185 63.8
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 2.4e-60 236.1 179 65.9
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 3.1e-60 235.7 205 59.0
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 4.1e-60 235.3 188 63.8
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 5.3e-60 235.0 197 61.9
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 1.5e-59 233.4 183 64.5
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 2.0e-59 233.0 197 61.4
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 2.6e-59 232.6 209 57.9
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 5.9e-59 231.5 190 61.6
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 2.2e-58 229.6 209 57.9
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 6.5e-58 228.0 208 57.2
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 6.5e-58 228.0 176 64.8
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 8.5e-58 227.6 206 55.3
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 1.1e-57 227.3 209 56.9
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 2.5e-57 226.1 215 56.3
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 3.2e-57 225.7 208 56.2
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 5.5e-57 224.9 183 58.5
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 7.2e-57 224.6 208 57.7
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 9.3e-57 224.2 193 61.7
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 2.7e-56 222.6 172 64.0
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 3.6e-56 222.2 197 54.8
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 1.0e-55 220.7 206 55.3
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 1.0e-55 220.7 206 55.3
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 1.0e-55 220.7 206 55.3
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 1.0e-55 220.7 203 58.6
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 1.8e-55 219.9 209 57.9
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 3.9e-55 218.8 205 56.6
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 5.1e-55 218.4 185 58.9
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 5.1e-55 218.4 202 56.4
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 6.7e-55 218.0 212 55.7
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 8.7e-55 217.6 211 55.9
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 1.1e-54 217.2 208 53.8
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 1.1e-54 217.2 202 54.5
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 1.5e-54 216.9 211 56.4
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 2.5e-54 216.1 212 55.7
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 5.7e-54 214.9 208 53.4
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 2.2e-53 213.0 218 54.1
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 4.8e-53 211.8 160 63.1
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 6.3e-53 211.5 186 60.8
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 5.3e-52 208.4 173 60.7
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 3.4e-51 205.7 198 53.5
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 3.4e-51 205.7 197 53.8
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 1.0e-50 204.1 205 53.7
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 2.9e-50 202.6 202 55.0
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 2.5e-49 199.5 150 62.0
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 1.0e-47 194.1 180 56.1
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 6.7e-39 164.9 169 50.9
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 1.1e-36 157.5 194 44.8
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 1.0e-34 151.0 167 45.5
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 1.7e-34 150.2 124 68.5
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 6.5e-34 148.3 168 44.6
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 8.0e-32 141.4 166 47.6
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 1.5e-30 137.1 183 39.9
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 1.7e-29 133.7 216 40.7
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 9.1e-28 127.9 105 66.7
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 4.4e-22 109.0 179 33.5
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 9.8e-22 107.8 195 35.4
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 2.8e-21 106.3 89 55.1
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 3.5e-19 99.4 205 33.7
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 1.0e-18 97.8 102 50.0
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 1.9e-17 93.6 221 29.0
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 2.8e-13 79.7 101 42.6
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 1.4e-12 77.4 130 33.8
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 1.1e-09 67.8 105 39.0
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 5.6e-09 65.5 176 29.0
Sabra04G0096800 Salix brachista HOM05D000546 ORTHO05D000398 8.0e-08 61.6 44 68.2
Cfa020839 Carpinus fangiana HOM05D006662 ORTHO05D008378 2.0e-06 57.0 49 59.2


User provided reference genes

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