Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 2.9e-111 405.2 199 100.0
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 1.0e-79 300.4 215 74.0
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 1.7e-71 273.1 198 74.7
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 2.5e-67 259.2 211 64.0
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 3.3e-67 258.8 202 63.9
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 1.6e-66 256.5 232 57.8
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 4.8e-66 255.0 213 62.9
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 6.3e-66 254.6 211 64.5
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 6.9e-65 251.1 202 64.9
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 1.4e-62 243.4 199 61.8
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 3.2e-62 242.3 212 59.9
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 7.9e-61 237.7 202 61.4
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 1.8e-60 236.5 193 62.2
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 8.8e-60 234.2 192 62.0
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 3.3e-59 232.3 203 62.6
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 3.3e-59 232.3 202 59.4
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 4.4e-59 231.9 212 58.0
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 4.4e-59 231.9 215 59.5
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 7.4e-59 231.1 204 59.3
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 1.7e-58 229.9 203 61.6
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 2.2e-58 229.6 193 61.1
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 2.2e-58 229.6 193 61.1
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 2.8e-58 229.2 209 57.9
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 4.8e-58 228.4 193 61.1
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 4.8e-58 228.4 205 60.5
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 2.4e-57 226.1 215 59.5
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 2.4e-57 226.1 197 59.9
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 5.3e-57 224.9 182 66.5
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 1.2e-56 223.8 200 60.0
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 1.2e-56 223.8 208 57.2
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 4.5e-56 221.9 205 57.1
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 7.7e-56 221.1 203 62.1
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 1.7e-55 219.9 203 56.7
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 1.7e-55 219.9 210 55.2
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 2.9e-55 219.2 209 57.4
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 2.9e-55 219.2 206 56.3
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 1.1e-54 217.2 205 54.6
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 2.5e-54 216.1 177 62.1
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 5.5e-54 214.9 203 56.7
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 1.2e-53 213.8 215 55.8
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 1.2e-53 213.8 204 58.8
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 3.6e-53 212.2 206 55.3
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 6.1e-53 211.5 206 58.3
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 1.8e-52 209.9 217 54.8
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 2.3e-52 209.5 208 55.8
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 3.9e-52 208.8 202 57.4
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 5.2e-52 208.4 202 54.0
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 7.4e-51 204.5 185 59.5
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 2.2e-50 203.0 204 58.3
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 2.8e-50 202.6 214 52.3
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 4.8e-50 201.8 196 57.7
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 1.1e-49 200.7 189 57.1
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 1.4e-49 200.3 193 58.5
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 1.4e-49 200.3 128 69.5
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 1.4e-49 200.3 128 69.5
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 3.1e-49 199.1 187 56.7
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 1.2e-48 197.2 194 54.6
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 1.6e-48 196.8 194 56.2
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 2.0e-48 196.4 192 55.2
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 2.6e-48 196.1 191 56.5
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 7.7e-48 194.5 168 61.9
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 7.7e-48 194.5 193 58.0
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 7.7e-48 194.5 174 59.2
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 7.7e-48 194.5 195 55.9
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 1.3e-47 193.7 192 54.7
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 1.7e-47 193.4 192 57.8
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 2.2e-47 193.0 188 55.3
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 2.9e-47 192.6 187 55.6
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 8.5e-47 191.0 186 57.5
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 8.5e-47 191.0 192 53.6
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 1.1e-46 190.7 94 89.4
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 1.5e-46 190.3 207 52.7
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 2.5e-46 189.5 164 58.5
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 3.2e-46 189.1 194 52.1
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 4.2e-46 188.7 174 59.2
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 5.5e-46 188.3 178 59.6
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 9.4e-46 187.6 165 58.2
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 2.1e-45 186.4 188 53.2
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 2.7e-45 186.0 173 59.0
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 3.6e-45 185.7 134 66.4
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 4.7e-45 185.3 170 56.5
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.8e-44 183.3 173 58.4
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 1.8e-44 183.3 197 50.8
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 2.3e-44 183.0 175 54.3
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 2.3e-44 183.0 205 51.2
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 3.0e-44 182.6 177 55.4
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 5.2e-44 181.8 121 69.4
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 2.2e-42 176.4 99 75.8
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 2.2e-42 176.4 147 57.8
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 3.7e-42 175.6 143 58.7
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 1.8e-41 173.3 110 68.2
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 1.5e-38 163.7 173 49.7
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 4.2e-38 162.2 140 59.3
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 7.2e-38 161.4 194 44.3
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 1.6e-37 160.2 78 87.2
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 1.7e-34 150.2 142 54.2
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 9.1e-33 144.4 107 62.6
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 1.2e-32 144.1 140 57.9
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 1.6e-32 143.7 153 51.6
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.0e-32 143.3 161 50.3
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 5.0e-31 138.7 89 64.0
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 3.2e-30 136.0 187 43.9
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 1.0e-28 131.0 165 43.6
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 8.8e-28 127.9 118 54.2
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 8.8e-28 127.9 92 59.8
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 1.1e-25 120.9 148 47.3
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 2.4e-25 119.8 114 50.0
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 2.0e-24 116.7 126 50.0
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 4.9e-18 95.5 140 45.0
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 8.3e-18 94.7 70 61.4
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 1.8e-17 93.6 72 66.7
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 9.2e-17 91.3 138 43.5
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 2.1e-13 80.1 124 39.5
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 7.5e-11 71.6 61 55.7
Cre07.g339200 Chlamydomonas reinhardtii HOM05D007022 ORTHO05D008868 2.3e-07 60.1 66 39.4
SEGI_30369 Sequoiadendron giganteum HOM05D007022 ORTHO05D014789 3.9e-07 59.3 129 38.0


User provided reference genes

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