Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G097500 Populus trichocarpa HOM05D007842 ORTHO05D009661 1.1e-69 266.5 134 100.0
Thecc.02G358800 Theobroma cacao HOM05D007842 ORTHO05D009661 6.4e-22 107.8 115 47.8
Cfa007650 Carpinus fangiana HOM05D007842 ORTHO05D009661 1.9e-21 106.3 140 46.4
QL01p044511 Quercus lobata HOM05D007842 ORTHO05D009661 4.1e-21 105.1 135 46.7
Sabra10G0097200 Salix brachista HOM05D007842 ORTHO05D009661 9.2e-21 104.0 128 45.3
Hma1.2p1_0030F.1_g018270 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 1.2e-20 103.6 131 48.9
Potri.010G127900 Populus trichocarpa HOM05D007842 ORTHO05D009661 3.0e-19 99.0 126 45.2
CiPaw.04G057000 Carya illinoinensis HOM05D007842 ORTHO05D009661 1.1e-18 97.1 119 47.9
COL.COLO4_07888 Corchorus olitorius HOM05D007842 ORTHO05D009661 3.3e-18 95.5 120 49.2
TWI31G1443 Tripterygium wilfordii HOM05D007842 ORTHO05D009661 9.5e-18 94.0 120 45.0
Glyma.10G276000 Glycine max HOM05D007842 ORTHO05D009661 2.1e-17 92.8 131 42.7
Dinv21114 Davidia involucrata HOM05D007842 ORTHO05D009661 8.1e-17 90.9 135 43.0
VMungo0720G1629 Vigna mungo HOM05D007842 ORTHO05D009661 1.4e-16 90.1 134 40.3
Manes.14G099200 Manihot esculenta HOM05D007842 ORTHO05D009661 2.3e-16 89.4 124 44.4
TPR.G26298 Trifolium pratense HOM05D007842 ORTHO05D009661 4.0e-16 88.6 133 39.1
Actinidia14866 Actinidia chinensis HOM05D007842 ORTHO05D009661 5.2e-16 88.2 132 43.9
Gohir.A12G169100 Gossypium hirsutum HOM05D007842 ORTHO05D009661 6.8e-16 87.8 132 40.9
Lj5g0000394 Lotus japonicus HOM05D007842 ORTHO05D009661 1.2e-15 87.0 130 41.5
Phvul.007G025600 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 1.5e-15 86.7 131 41.2
CiPaw.03G089900 Carya illinoinensis HOM05D007842 ORTHO05D009661 3.4e-15 85.5 124 43.5
Medtr1g111300 Medicago truncatula HOM05D007842 ORTHO05D009661 4.4e-15 85.1 133 39.8
Glyma.20G113700 Glycine max HOM05D007842 ORTHO05D009661 5.8e-15 84.7 132 39.4
Actinidia16632 Actinidia chinensis HOM05D007842 ORTHO05D009661 3.7e-14 82.0 134 41.8
Lj2g0000320 Lotus japonicus HOM05D007842 ORTHO05D009661 4.9e-14 81.6 121 39.7
Rhsim09G0110600 Rhododendron simsii HOM05D007842 ORTHO05D009661 1.9e-13 79.7 124 44.4
Gohir.D12G172400 Gossypium hirsutum HOM05D007842 ORTHO05D009661 2.4e-13 79.3 135 41.5
Manes.06G070800 Manihot esculenta HOM05D007842 ORTHO05D009661 3.2e-13 79.0 129 41.9
Gorai.008G184900 Gossypium raimondii HOM05D007842 ORTHO05D009661 9.2e-13 77.4 135 39.3
Manes.14G099300 Manihot esculenta HOM05D007842 ORTHO05D009661 9.2e-13 77.4 131 39.7
Eucgr.B03033 Eucalyptus grandis HOM05D007842 ORTHO05D009661 1.2e-12 77.0 118 41.5
Hma1.2p1_0030F.1_g018290 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 3.5e-12 75.5 123 39.8
TAR629G0634 Trochodendron aralioides HOM05D000414 ORTHO05D000276 3.5e-12 75.5 138 37.0
SalBow8G3786 Salvia bowleyana HOM05D007842 ORTHO05D009661 3.9e-11 72.0 116 40.5
Migut.L01087 Erythranthe guttata HOM05D007842 ORTHO05D009661 5.1e-11 71.6 120 36.7
SalBow8G5078 Salvia bowleyana HOM05D007842 ORTHO05D009661 5.1e-11 71.6 118 37.3
Lsat_1_v5_gn_4_18820 Lactuca sativa HOM05D007842 ORTHO05D009661 8.6e-11 70.9 118 37.3
Eucgr.G02340 Eucalyptus grandis HOM05D007842 ORTHO05D009661 1.9e-10 69.7 122 36.1
DCAR_007231 Daucus carota HOM05D007842 ORTHO05D009661 3.3e-10 68.9 119 37.0
Haze_14444 Corylus avellana HOM05D007842 ORTHO05D009661 4.3e-10 68.6 92 43.5
Lsat_1_v5_gn_4_18840 Lactuca sativa HOM05D007842 ORTHO05D009661 7.3e-10 67.8 112 39.3
Atru.chr11.1326 Acer truncatum HOM05D007842 ORTHO05D009661 1.6e-09 66.6 92 42.4
Peaxi162Scf00380g00818 Petunia axillaris HOM05D007842 ORTHO05D009661 1.6e-09 66.6 119 36.1
Sopen05g005460 Solanum pennellii HOM05D007842 ORTHO05D009661 1.6e-09 66.6 120 34.2
arahy.Tifrunner.gnm1.ann1.3ZRF2C Arachis hypogaea HOM05D007842 ORTHO05D009661 2.1e-09 66.2 136 33.1
MSTRG.7679 Avicennia marina HOM05D007842 ORTHO05D009661 2.1e-09 66.2 120 40.0
Prupe.1G307400 Prunus persica HOM05D007842 ORTHO05D009661 2.1e-09 66.2 118 41.5
Solyc05g009650.4 Solanum lycopersicum HOM05D007842 ORTHO05D009661 2.1e-09 66.2 120 34.2
Lsat_1_v5_gn_4_18760 Lactuca sativa HOM05D007842 ORTHO05D009661 8.1e-09 64.3 114 36.0
Actinidia04615 Actinidia chinensis HOM05D007842 ORTHO05D009661 1.1e-08 63.9 145 35.2
SalBow8G0003 Salvia bowleyana HOM05D007842 ORTHO05D009661 1.1e-08 63.9 126 37.3
Actinidia38383 Actinidia chinensis HOM05D007842 ORTHO05D009661 1.8e-08 63.2 141 35.5
Manes.06G070700 Manihot esculenta HOM05D007842 ORTHO05D009661 1.8e-08 63.2 131 35.9
Lsat_1_v5_gn_4_18800 Lactuca sativa HOM05D007842 ORTHO05D009661 2.4e-08 62.8 127 33.9
Phvul.003G028900 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 4.0e-08 62.0 120 38.3
SGA_v2.0_scaffold124G33571 Striga asiatica HOM05D007842 ORTHO05D009661 8.9e-08 60.8 108 40.7
TAR371G0248 Trochodendron aralioides HOM05D007842 ORTHO05D009661 2.0e-07 59.7 117 37.6
Glyma.02G097800 Glycine max HOM05D007842 ORTHO05D009661 2.6e-07 59.3 120 36.7
Lalb_Chr17g0342001 Lupinus albus HOM05D007842 ORTHO05D009661 3.4e-07 58.9 100 38.0
MSTRG.13511 Avicennia marina HOM05D007842 ORTHO05D009661 9.9e-07 57.4 106 39.6
DCAR_023676 Daucus carota HOM05D007842 ORTHO05D009661 9.9e-07 57.4 127 35.4
Nitab4.5_0003642g0020 Nicotiana tabacum HOM05D007842 ORTHO05D009661 9.9e-07 57.4 97 36.1
Oeu041893.1 Olea europaea HOM05D007842 ORTHO05D009661 9.9e-07 57.4 118 36.4
Lsat_1_v5_gn_3_59880 Lactuca sativa HOM05D007842 ORTHO05D009661 1.3e-06 57.0 114 35.1
RcHm_v2.0_Chr4g0435601 Rosa chinensis HOM05D022909 ORTHO05D009661 1.3e-06 57.0 107 38.3
Oeu004600.1 Olea europaea HOM05D007842 ORTHO05D009661 1.7e-06 56.6 122 32.0
Lsat_1_v5_gn_4_18860 Lactuca sativa HOM05D007842 ORTHO05D009661 2.2e-06 56.2 114 32.5
Actinidia13668 Actinidia chinensis HOM05D007842 ORTHO05D009661 2.9e-06 55.8 151 32.5
ECA234G4760 Erigeron canadensis HOM05D007842 ORTHO05D009661 3.8e-06 55.5 109 31.2
Gorai.013G081200 Gossypium raimondii HOM05D007842 ORTHO05D009661 3.8e-06 55.5 118 37.3


User provided reference genes

Program Settings