Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 2.8e-77 292.0 158 100.0
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 9.4e-65 250.4 189 75.7
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 5.1e-63 244.6 158 85.4
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 2.6e-59 232.3 159 81.1
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 5.2e-55 218.0 160 75.0
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 6.5e-50 201.1 142 76.8
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 1.9e-49 199.5 157 73.9
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 7.2e-49 197.6 160 70.0
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 6.1e-48 194.5 160 68.8
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 4.0e-47 191.8 161 70.2
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 3.4e-46 188.7 160 65.6
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 4.4e-46 188.3 158 67.1
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 1.3e-45 186.8 161 65.8
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 1.7e-45 186.4 160 66.9
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 4.8e-45 184.9 160 65.6
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 8.3e-45 184.1 160 68.8
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 1.1e-44 183.7 152 66.4
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 1.4e-44 183.3 160 65.6
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 2.4e-44 182.6 160 66.9
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 2.4e-44 182.6 160 65.6
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 2.4e-44 182.6 160 65.6
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 4.5e-43 178.3 159 66.0
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 4.5e-43 178.3 160 65.0
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 5.9e-43 177.9 148 67.6
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 1.0e-42 177.2 138 71.0
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 1.0e-42 177.2 158 66.5
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 3.8e-42 175.3 164 62.2
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 3.8e-42 175.3 160 65.6
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 8.5e-42 174.1 162 61.7
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 8.5e-42 174.1 158 61.4
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 1.5e-41 173.3 130 73.8
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.5e-41 173.3 146 69.2
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 1.9e-41 172.9 161 63.4
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 4.2e-41 171.8 158 60.8
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 7.2e-41 171.0 160 63.1
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 7.2e-41 171.0 167 61.1
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.6e-40 169.9 166 63.3
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 2.1e-40 169.5 152 64.5
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.8e-39 166.4 167 61.7
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 1.8e-39 166.4 132 66.7
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 2.3e-39 166.0 161 59.0
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 3.0e-39 165.6 161 59.6
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 3.0e-39 165.6 161 59.6
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 3.0e-39 165.6 167 60.5
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 4.0e-39 165.2 161 59.6
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 4.0e-39 165.2 161 59.6
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 1.2e-38 163.7 161 59.0
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 1.2e-38 163.7 156 59.0
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 1.5e-38 163.3 161 59.0
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 1.5e-38 163.3 133 64.7
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 1.5e-38 163.3 133 64.7
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 3.4e-38 162.2 167 61.1
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 9.8e-38 160.6 132 67.4
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 1.3e-37 160.2 150 59.3
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 2.8e-37 159.1 161 57.8
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 4.9e-37 158.3 152 59.2
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 6.3e-37 157.9 198 49.5
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 1.8e-36 156.4 161 60.2
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 3.1e-36 155.6 133 63.9
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 4.1e-36 155.2 150 60.0
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 9.2e-36 154.1 158 57.0
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 9.2e-36 154.1 156 57.7
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 1.6e-35 153.3 175 52.6
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 5.9e-35 151.4 160 56.9
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 5.9e-35 151.4 162 56.8
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 1.0e-34 150.6 148 60.8
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 1.0e-34 150.6 164 58.5
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 1.0e-34 150.6 115 73.0
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 2.9e-34 149.1 137 62.8
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 1.9e-33 146.4 155 54.2
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 3.3e-33 145.6 161 57.1
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 4.3e-33 145.2 161 55.3
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 5.6e-33 144.8 135 60.0
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 7.3e-33 144.4 158 54.4
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 2.1e-32 142.9 155 54.8
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 2.8e-32 142.5 161 56.5
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 6.1e-32 141.4 126 61.1
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 6.1e-32 141.4 142 59.9
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 6.1e-32 141.4 129 58.9
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 8.0e-32 141.0 153 57.5
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 1.0e-31 140.6 127 65.4
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 4.0e-31 138.7 133 60.2
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 2.6e-30 136.0 162 54.3
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 1.7e-29 133.3 156 55.8
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 2.2e-29 132.9 135 60.0
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 3.7e-29 132.1 136 60.3
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 3.7e-29 132.1 166 51.8
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 4.9e-29 131.7 157 57.3
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 8.3e-29 131.0 156 52.6
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 9.2e-28 127.5 153 50.3
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 2.0e-27 126.3 117 61.5
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 2.7e-27 125.9 161 54.0
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 1.0e-26 124.0 118 60.2
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 3.0e-26 122.5 145 49.7
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 2.5e-25 119.4 153 50.3
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 5.6e-25 118.2 100 65.0
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 2.1e-24 116.3 108 61.1
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 2.1e-24 116.3 132 53.8
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 2.1e-24 116.3 146 52.1
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 3.6e-24 115.5 101 62.4
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 2.3e-23 112.8 108 60.2
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 5.2e-23 111.7 153 47.1
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 5.2e-23 111.7 153 47.1
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 2.0e-22 109.8 126 51.6
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 1.7e-21 106.7 88 63.6
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 6.4e-21 104.8 161 46.0
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 4.6e-19 98.6 102 55.9
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 7.8e-19 97.8 100 56.0
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 1.3e-18 97.1 113 53.1
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 5.0e-18 95.1 143 42.7
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 1.9e-17 93.2 94 60.6
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 1.1e-15 87.4 92 51.1
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 2.0e-14 83.2 75 60.0
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 2.0e-14 83.2 89 59.6
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 3.4e-14 82.4 118 50.0
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 1.3e-13 80.5 55 74.5
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.3e-13 80.5 105 46.7
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 1.7e-13 80.1 90 54.4
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 8.3e-13 77.8 132 46.2
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 1.1e-12 77.4 118 40.7
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 1.4e-12 77.0 164 36.0
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 3.2e-12 75.9 109 51.4
ClCG01G025500 Citrullus lanatus HOM05D005827 ORTHO05D005864 4.1e-12 75.5 108 48.1
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 5.4e-12 75.1 141 37.6
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 7.1e-12 74.7 78 50.0
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 9.2e-12 74.3 118 38.1
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 2.1e-11 73.2 119 48.7
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 4.6e-11 72.0 117 48.7
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 6.0e-11 71.6 149 40.3
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 4.3e-09 65.5 95 47.4
CARHR144210 Cardamine hirsuta HOM05D005827 ORTHO05D005864 7.6e-06 54.7 52 57.7


User provided reference genes

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