Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G095550 Populus trichocarpa HOM05D000150 ORTHO05D035202 3.9e-57 224.6 112 100.0
Potri.009G095200 Populus trichocarpa HOM05D000150 ORTHO05D000108 6.9e-30 134.0 73 97.3
Potri.009G095500 Populus trichocarpa HOM05D000150 ORTHO05D000108 3.4e-29 131.7 73 94.5
Manes.10G076962 Manihot esculenta HOM05D000150 ORTHO05D000108 3.2e-19 98.6 71 73.2
Thecc.02G108700 Theobroma cacao HOM05D000150 ORTHO05D000108 5.2e-17 91.3 70 67.1
TWI79G0449 Tripterygium wilfordii HOM05D000150 ORTHO05D000108 5.2e-17 91.3 68 67.6
COL.COLO4_32588 Corchorus olitorius HOM05D000150 ORTHO05D000108 7.5e-16 87.4 69 63.8
PGR042G2746 Punica granatum HOM05D000150 ORTHO05D000108 7.5e-16 87.4 68 66.2
COL.COLO4_32587 Corchorus olitorius HOM05D000150 ORTHO05D000108 9.7e-16 87.0 69 65.2
Duzib132G1242 Durio zibethinus HOM05D000150 ORTHO05D000108 1.3e-15 86.7 70 68.6
CiPaw.05G011900 Carya illinoinensis HOM05D000150 ORTHO05D000108 6.3e-15 84.3 70 62.9
Eucgr.G01348 Eucalyptus grandis HOM05D000150 ORTHO05D000108 1.1e-14 83.6 64 65.6
QL11p033480 Quercus lobata HOM05D000150 ORTHO05D000108 1.4e-14 83.2 66 65.2
Glyma.10G262700 Glycine max HOM05D000150 ORTHO05D000108 1.8e-14 82.8 72 54.2
Dinv42195 Davidia involucrata HOM05D000150 ORTHO05D000108 3.1e-14 82.0 65 61.5
Eucgr.G01343 Eucalyptus grandis HOM05D000150 ORTHO05D035202 3.1e-14 82.0 64 64.1
Nn1g04689 Nelumbo nucifera HOM05D000150 ORTHO05D000108 3.1e-14 82.0 65 60.0
Atru.chr5.2526 Acer truncatum HOM05D000150 ORTHO05D000108 1.6e-13 79.7 72 58.3
Haze_10185 Corylus avellana HOM05D000150 ORTHO05D000108 2.0e-13 79.3 66 62.1
Gohir.D02G206900 Gossypium hirsutum HOM05D000150 ORTHO05D000108 2.0e-13 79.3 67 61.2
Gorai.005G234700 Gossypium raimondii HOM05D000150 ORTHO05D000108 2.0e-13 79.3 67 61.2
Lalb_Chr02g0145291 Lupinus albus HOM05D000150 ORTHO05D000108 3.5e-13 78.6 70 52.9
Lalb_Chr06g0165431 Lupinus albus HOM05D000150 ORTHO05D000108 7.7e-13 77.4 64 57.8
Hma1.2p1_1023F.1_g249090 Hydrangea macrophylla HOM05D000150 ORTHO05D000108 3.8e-12 75.1 68 57.4
Phvul.007G039600 Phaseolus vulgaris HOM05D000150 ORTHO05D000108 5.0e-12 74.7 71 50.7
VMungo0720G0182 Vigna mungo HOM05D000150 ORTHO05D000108 5.0e-12 74.7 66 54.5
Cfa004583 Carpinus fangiana HOM05D000150 ORTHO05D000108 6.5e-12 74.3 66 59.1
Phvul.007G039500 Phaseolus vulgaris HOM05D000150 ORTHO05D000108 6.5e-12 74.3 72 50.0
EL10Ac9g22269 Beta vulgaris HOM05D000150 ORTHO05D000108 1.5e-11 73.2 76 52.6
vmacro19452 Vaccinium macrocarpon HOM05D000150 ORTHO05D000108 1.5e-11 73.2 68 61.8
Cfa004066 Carpinus fangiana HOM05D000150 ORTHO05D000108 4.2e-11 71.6 61 55.7
Ca_04723_v3 Cicer arietinum L. HOM05D000150 ORTHO05D000108 4.2e-11 71.6 66 54.5
Ciclev10028293m.g Citrus clementina HOM05D000150 ORTHO05D000108 4.2e-11 71.6 65 55.4
Haze_15345 Corylus avellana HOM05D000150 ORTHO05D000108 7.2e-11 70.9 59 55.9
Phvul.007G039400 Phaseolus vulgaris HOM05D000150 ORTHO05D000108 7.2e-11 70.9 67 55.2
TPR.G3292 Trifolium pratense HOM05D000150 ORTHO05D000108 7.2e-11 70.9 61 59.0
Haze_15344 Corylus avellana HOM05D000150 ORTHO05D000108 9.4e-11 70.5 62 56.5
Lj5g0007021 Lotus japonicus HOM05D000150 ORTHO05D000108 9.4e-11 70.5 63 57.1
Medtr1g107380 Medicago truncatula HOM05D000150 ORTHO05D000108 1.2e-10 70.1 60 58.3
Psat6g218880 Pisum sativum HOM05D000150 ORTHO05D000108 1.2e-10 70.1 70 54.3
Aqoxy6G02851 Aquilegia oxysepala HOM05D000150 ORTHO05D000108 2.1e-10 69.3 58 58.6
Dinv30039 Davidia involucrata HOM05D000150 ORTHO05D000108 4.7e-10 68.2 57 57.9
Potri.007G049600 Populus trichocarpa HOM05D000150 ORTHO05D000108 1.0e-09 67.0 70 45.7
TWI09G0193 Tripterygium wilfordii HOM05D000150 ORTHO05D000108 1.0e-09 67.0 49 63.3
Aqoxy1G02888 Aquilegia oxysepala HOM05D000150 ORTHO05D000108 1.4e-09 66.6 58 55.2
Lalb_Chr09g0333951 Lupinus albus HOM05D000150 ORTHO05D000108 1.8e-09 66.2 48 62.5
TAR627G0983 Trochodendron aralioides HOM05D000150 ORTHO05D000108 1.8e-09 66.2 58 62.1
MELO3C024803.2 Cucumis melo HOM05D000150 ORTHO05D000108 2.3e-09 65.9 58 53.4
Glyma.17G166500 Glycine max HOM05D000150 ORTHO05D000108 3.0e-09 65.5 50 56.0
ClCG02G008160 Citrullus lanatus HOM05D000150 ORTHO05D000108 4.0e-09 65.1 59 50.8
Aqoxy1G02670 Aquilegia oxysepala HOM05D000150 ORTHO05D000108 6.8e-09 64.3 58 53.4
Aqoxy1G03044 Aquilegia oxysepala HOM05D000150 ORTHO05D000108 8.8e-09 63.9 58 53.4
Lalb_Chr09g0333941 Lupinus albus HOM05D000150 ORTHO05D000108 8.8e-09 63.9 47 63.8
THA.LOC104807238 Tarenaya hassleriana HOM05D000150 ORTHO05D000108 8.8e-09 63.9 72 47.2
Lalb_Chr09g0333961 Lupinus albus HOM05D000150 ORTHO05D000108 1.2e-08 63.5 56 58.9
Psat4g084440 Pisum sativum HOM05D000150 ORTHO05D000108 1.5e-08 63.2 62 51.6
Psat4g084480 Pisum sativum HOM05D000150 ORTHO05D000108 1.5e-08 63.2 62 51.6
Lalb_Chr03g0038411 Lupinus albus HOM05D000150 ORTHO05D035202 2.0e-08 62.8 63 47.6
Gohir.D11G203700 Gossypium hirsutum HOM05D000150 ORTHO05D000108 2.6e-08 62.4 62 53.2
Gorai.007G218400 Gossypium raimondii HOM05D000150 ORTHO05D000108 2.6e-08 62.4 62 53.2
Sed0022144 Sechium edule HOM05D000150 ORTHO05D000108 2.6e-08 62.4 63 49.2
Cpa.g.sc6.92 Carica papaya HOM05D000150 ORTHO05D000108 3.4e-08 62.0 56 50.0
HanXRQChr10g0295001 Helianthus annuus HOM05D000150 ORTHO05D000108 7.5e-08 60.8 65 53.8
TPR.G23852 Trifolium pratense HOM05D000150 ORTHO05D000108 7.5e-08 60.8 55 50.9
Cpa.g.sc1205.1 Carica papaya HOM05D000150 ORTHO05D000108 9.8e-08 60.5 81 48.1
Lalb_Chr09g0333931 Lupinus albus HOM05D000150 ORTHO05D000108 1.3e-07 60.1 41 65.9
THA.LOC104807605 Tarenaya hassleriana HOM05D000150 ORTHO05D000108 1.3e-07 60.1 55 54.5
Atru.chr3.244 Acer truncatum HOM05D000150 ORTHO05D000108 1.7e-07 59.7 42 66.7
VMungo0251G0201 Vigna mungo HOM05D000150 ORTHO05D000108 1.7e-07 59.7 55 50.9
CsaV3_2G035510 Cucumis sativus L. HOM05D000150 ORTHO05D000108 2.2e-07 59.3 58 50.0
Medtr4g095008 Medicago truncatula HOM05D000150 ORTHO05D000108 2.2e-07 59.3 63 46.0
Thecc.01G064000 Theobroma cacao HOM05D000150 ORTHO05D000108 2.2e-07 59.3 68 45.6
Duzib138G0693 Durio zibethinus HOM05D000150 ORTHO05D000108 2.8e-07 58.9 68 47.1
HanXRQChr10g0297011 Helianthus annuus HOM05D000150 ORTHO05D000108 2.8e-07 58.9 55 60.0
HanXRQChr10g0297031 Helianthus annuus HOM05D000150 ORTHO05D000108 2.8e-07 58.9 65 52.3
Lalb_Chr15g0079761 Lupinus albus HOM05D000150 ORTHO05D000108 2.8e-07 58.9 46 56.5
COL.COLO4_11492 Corchorus olitorius HOM05D000150 ORTHO05D000108 3.7e-07 58.5 48 56.2
Gohir.A11G220000 Gossypium hirsutum HOM05D000150 ORTHO05D000108 3.7e-07 58.5 62 53.2
Hma1.2p1_0108F.1_g051930 Hydrangea macrophylla HOM05D000150 ORTHO05D000108 4.8e-07 58.2 68 47.1
Hma1.2p1_0108F.1_g051940 Hydrangea macrophylla HOM05D000150 ORTHO05D000108 4.8e-07 58.2 68 47.1
Lalb_Chr05g0213461 Lupinus albus HOM05D000150 ORTHO05D000108 6.3e-07 57.8 57 54.4
Medtr4g094920 Medicago truncatula HOM05D000150 ORTHO05D000108 6.3e-07 57.8 67 43.3
Phvul.003G239700 Phaseolus vulgaris HOM05D000150 ORTHO05D000108 6.3e-07 57.8 51 56.9
EL10Ac6g15686 Beta vulgaris HOM05D000150 ORTHO05D000108 8.3e-07 57.4 46 58.7
TWI79G0155 Tripterygium wilfordii HOM05D000150 ORTHO05D002738 8.3e-07 57.4 65 40.0
CDE06G1053 Ceratophyllum demersum HOM05D000150 ORTHO05D002738 1.4e-06 56.6 58 44.8
Migut.G00842 Erythranthe guttata HOM05D000150 ORTHO05D000108 1.8e-06 56.2 72 41.7
Manes.07G070800 Manihot esculenta HOM05D000150 ORTHO05D002738 1.8e-06 56.2 52 51.9
SHI05284 Sapria himalayana HOM05D000150 ORTHO05D002738 1.8e-06 56.2 49 57.1
Ah.03g146080 Amaranthus hybridus HOM05D000150 ORTHO05D000108 2.4e-06 55.8 47 59.6
Migut.G00840 Erythranthe guttata HOM05D000150 ORTHO05D000108 2.4e-06 55.8 72 41.7
RcHm_v2.0_Chr6g0282101 Rosa chinensis HOM05D000150 ORTHO05D000108 2.4e-06 55.8 64 48.4
Migut.G00836 Erythranthe guttata HOM05D000150 ORTHO05D000108 3.1e-06 55.5 72 41.7
Manes.13G118100 Manihot esculenta HOM05D000150 ORTHO05D000108 3.1e-06 55.5 47 57.4
Medtr5g016480 Medicago truncatula HOM05D000150 ORTHO05D000108 3.1e-06 55.5 71 38.0
Nitab4.5_0008255g0010 Nicotiana tabacum HOM05D000150 ORTHO05D000108 3.1e-06 55.5 69 43.5
MBI07_g19159_MAGBIO Magnolia biondii HOM05D000150 ORTHO05D000108 4.1e-06 55.1 52 46.2
PSO170G0333 Papaver somniferum HOM05D000150 ORTHO05D002738 4.1e-06 55.1 59 44.1
SGA_v2.0_scaffold17G08010 Striga asiatica HOM05D000150 ORTHO05D000108 4.1e-06 55.1 58 46.6
TAR628G0507 Trochodendron aralioides HOM05D000150 ORTHO05D002738 4.1e-06 55.1 71 43.7
Atru.chr9.964 Acer truncatum HOM05D000150 ORTHO05D000108 5.4e-06 54.7 95 37.9
HanXRQChr16g0514831 Helianthus annuus HOM05D000150 ORTHO05D000108 5.4e-06 54.7 72 40.3
PSO210G6418 Papaver somniferum HOM05D000150 ORTHO05D002738 5.4e-06 54.7 61 44.3
Psat7g063080 Pisum sativum HOM05D000150 ORTHO05D000108 5.4e-06 54.7 62 50.0
QL02p019192 Quercus lobata HOM05D000150 ORTHO05D000108 5.4e-06 54.7 63 47.6
CiPaw.06G169000 Carya illinoinensis HOM05D000150 ORTHO05D002738 7.0e-06 54.3 52 51.9
Eucgr.I01103 Eucalyptus grandis HOM05D000150 ORTHO05D002738 7.0e-06 54.3 52 51.9
Lsat_1_v5_gn_5_115100 Lactuca sativa HOM05D000150 ORTHO05D000108 7.0e-06 54.3 60 46.7
CiPaw.05G012000 Carya illinoinensis HOM05D000150 ORTHO05D002738 9.1e-06 53.9 52 50.0
AUR62038258 Chenopodium quinoa HOM05D000150 ORTHO05D000108 9.1e-06 53.9 45 53.3
COL.COLO4_32586 Corchorus olitorius HOM05D000150 ORTHO05D002738 9.1e-06 53.9 49 53.1
Haze_10186 Corylus avellana HOM05D000150 ORTHO05D002738 9.1e-06 53.9 52 50.0
Duzib052G0933 Durio zibethinus HOM05D000150 ORTHO05D002738 9.1e-06 53.9 52 50.0
ECA234G3803 Erigeron canadensis HOM05D000150 ORTHO05D000108 9.1e-06 53.9 46 58.7
HanXRQChr05g0163041 Helianthus annuus HOM05D000027 ORTHO05D000066 9.1e-06 53.9 62 40.3
Hma1.2p1_0796F.1_g219230 Hydrangea macrophylla HOM05D000150 ORTHO05D002738 9.1e-06 53.9 53 50.9
PSO017G2265 Papaver somniferum HOM05D000027 ORTHO05D000066 9.1e-06 53.9 45 48.9
PSO447G0285 Papaver somniferum HOM05D000027 ORTHO05D000066 9.1e-06 53.9 49 49.0
PGR102G3046 Punica granatum HOM05D000150 ORTHO05D000108 9.1e-06 53.9 59 44.1
QL10p059028 Quercus lobata HOM05D000150 ORTHO05D000108 9.1e-06 53.9 63 47.6
Sc16g0001420 Simmondsia chinensis HOM05D000150 ORTHO05D000108 9.1e-06 53.9 43 60.5


User provided reference genes

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