Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G094001 Populus trichocarpa HOM05D010572 ORTHO05D012753 1.1e-80 303.5 185 100.0
Sabra09G0072300 Salix brachista HOM05D010572 ORTHO05D012753 4.5e-66 255.0 194 83.5
Dinv42202 Davidia involucrata HOM05D002655 ORTHO05D002558 3.6e-39 165.6 139 58.3
Prupe.8G137200 Prunus persica HOM05D010572 ORTHO05D012753 9.1e-35 151.0 139 57.6
MELO3C018497.2 Cucumis melo HOM05D010572 ORTHO05D012753 3.2e-32 142.5 140 49.3
QL11p032781 Quercus lobata HOM05D010572 ORTHO05D012753 9.4e-32 141.0 139 52.5
CsaV3_7G008070 Cucumis sativus L. HOM05D010572 ORTHO05D012753 3.9e-30 135.6 138 47.8
ClCG02G006530 Citrullus lanatus HOM05D010572 ORTHO05D012753 7.7e-26 121.3 139 48.2
Cc02_g19390 Coffea canephora HOM05D010572 ORTHO05D012753 7.7e-26 121.3 139 46.8
Hund06309 Selenicereus undatus HOM05D010572 ORTHO05D012753 7.7e-26 121.3 132 45.5
EL10Ac9g22258 Beta vulgaris HOM05D010572 ORTHO05D012753 1.1e-24 117.5 136 43.4
AUR62010327 Chenopodium quinoa HOM05D002655 ORTHO05D002558 7.2e-24 114.8 132 43.2
Hund00156 Selenicereus undatus HOM05D010572 ORTHO05D012753 7.2e-24 114.8 141 42.6
AUR62039059 Chenopodium quinoa HOM05D010572 ORTHO05D012753 1.2e-23 114.0 132 43.2
Rhsim11G0158100 Rhododendron simsii HOM05D010572 ORTHO05D012753 3.0e-22 109.4 138 45.7
Rhsim11G0156600 Rhododendron simsii HOM05D010572 ORTHO05D012753 5.2e-22 108.6 138 45.7
Ah.01g010990 Amaranthus hybridus HOM05D010572 ORTHO05D012753 6.7e-22 108.2 139 38.1
Rhsim03G0135300 Rhododendron simsii HOM05D010572 ORTHO05D012753 1.3e-20 104.0 112 46.4
AUR62039060 Chenopodium quinoa HOM05D010572 ORTHO05D012753 6.3e-20 101.7 124 41.9
Thecc.02G110700 Theobroma cacao HOM05D010572 ORTHO05D012753 1.1e-19 100.9 122 43.4
Manes.10G075806 Manihot esculenta HOM05D010572 ORTHO05D012753 1.1e-16 90.9 128 39.8
PGR042G2017 Punica granatum HOM05D010572 ORTHO05D012753 2.7e-15 86.3 132 37.1
SGA_v2.0_scaffold50G18510 Striga asiatica HOM05D029849 ORTHO05D011912 4.7e-07 58.9 99 33.3
SGA_v2.0_scaffold266G46147 Striga asiatica HOM05D029849 ORTHO05D011912 1.0e-06 57.8 107 30.8
Atru.chr6.2712 Acer truncatum HOM05D007742 ORTHO05D004072 1.8e-06 57.0 45 53.3
Dinv33270 Davidia involucrata HOM05D007742 ORTHO05D004072 1.8e-06 57.0 43 48.8
DCAR_029957 Daucus carota HOM05D000089 ORTHO05D000104 6.8e-06 55.1 78 37.2
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 6.8e-06 55.1 116 25.9
QL02p068827 Quercus lobata HOM05D007742 ORTHO05D004072 6.8e-06 55.1 44 47.7
CAN.G548.7 Capsicum annuum HOM05D009408 ORTHO05D000309 8.8e-06 54.7 83 34.9


User provided reference genes

Program Settings