Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 2.0e-68 262.3 133 100.0
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 4.2e-66 254.6 133 96.2
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 2.0e-60 235.7 133 87.2
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 5.9e-60 234.2 133 87.2
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 2.9e-59 231.9 133 85.7
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 3.8e-59 231.5 133 88.0
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 2.5e-58 228.8 133 84.2
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 3.2e-58 228.4 132 84.1
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 5.5e-58 227.6 133 82.7
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 5.5e-58 227.6 133 84.2
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 5.5e-58 227.6 133 84.2
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 5.5e-58 227.6 133 84.2
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 2.7e-57 225.3 133 82.7
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 2.7e-57 225.3 133 82.7
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 2.7e-57 225.3 133 82.7
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 3.6e-57 224.9 131 84.7
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 4.6e-57 224.6 133 82.0
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 1.0e-56 223.4 133 82.0
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 1.4e-56 223.0 132 82.6
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 1.8e-56 222.6 133 81.2
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 1.8e-56 222.6 133 81.2
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 3.9e-56 221.5 133 84.2
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 3.9e-56 221.5 133 79.7
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 82.7
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 8.8e-56 220.3 133 79.7
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 1.1e-55 219.9 133 78.9
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 1.1e-55 219.9 133 83.5
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 1.5e-55 219.5 133 80.5
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 1.5e-55 219.5 133 82.0
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 2.5e-55 218.8 132 80.3
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 3.3e-55 218.4 132 83.3
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 7.4e-55 217.2 133 79.7
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 9.7e-55 216.9 133 78.9
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 9.7e-55 216.9 140 79.3
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 9.7e-55 216.9 133 79.7
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 2.2e-54 215.7 134 82.1
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 2.8e-54 215.3 135 83.0
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 1.4e-53 213.0 130 79.2
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 1.4e-53 213.0 133 75.2
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 1.8e-53 212.6 133 77.4
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 4.1e-53 211.5 133 74.4
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 9.1e-53 210.3 133 75.2
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 1.2e-52 209.9 133 77.4
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 1.5e-52 209.5 133 75.9
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 1.5e-52 209.5 133 77.4
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 4.5e-52 208.0 133 74.4
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 5.9e-52 207.6 181 62.4
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 1.7e-51 206.1 133 73.7
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 2.2e-51 205.7 130 73.8
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 5.0e-51 204.5 133 74.4
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 6.5e-51 204.1 133 72.9
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 1.1e-50 203.4 133 74.4
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 1.1e-50 203.4 133 72.9
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 4.2e-50 201.4 133 74.4
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 5.5e-50 201.1 133 72.2
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 7.2e-50 200.7 133 72.2
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 7.2e-50 200.7 113 85.0
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 2.1e-49 199.1 133 71.4
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 2.7e-49 198.7 116 83.6
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 1.0e-48 196.8 133 70.7
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 1.4e-48 196.4 133 70.7
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 1.8e-48 196.1 115 80.9
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 6.7e-48 194.1 118 76.3
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 1.1e-47 193.4 133 69.2
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 2.0e-47 192.6 133 68.4
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 5.7e-47 191.0 133 67.7
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 4.8e-46 188.0 176 56.8
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 1.2e-44 183.3 133 64.7
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 3.5e-44 181.8 137 65.0
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 4.5e-44 181.4 128 74.2
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 2.2e-43 179.1 131 67.9
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 3.8e-43 178.3 196 51.0
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 8.5e-43 177.2 101 81.2
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 1.1e-42 176.8 98 87.8
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 2.7e-41 172.2 136 61.8
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 2.7e-41 172.2 132 63.6
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 3.6e-41 171.8 105 76.2
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 1.4e-40 169.9 105 75.2
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 1.8e-40 169.5 105 72.4
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 8.8e-40 167.2 128 58.6
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 1.1e-39 166.8 103 76.7
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 2.0e-39 166.0 100 77.0
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 2.6e-39 165.6 98 80.6
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 2.8e-38 162.2 105 73.3
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 7.0e-37 157.5 92 80.4
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 1.5e-31 139.8 122 54.9
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 9.7e-31 137.1 133 60.2
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 2.2e-30 136.0 114 50.9
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 4.8e-30 134.8 133 60.2
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 3.8e-27 125.2 70 87.1
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 1.1e-26 123.6 142 45.1
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 1.7e-22 109.8 111 48.6
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 3.7e-22 108.6 104 51.0
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 2.7e-20 102.4 63 76.2
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 2.7e-20 102.4 130 41.5
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 1.0e-19 100.5 111 45.0
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 7.2e-18 94.4 67 68.7
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 1.7e-11 73.2 74 45.9
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 3.9e-11 72.0 47 61.7
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 5.0e-11 71.6 68 54.4
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 7.3e-10 67.8 89 39.3
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 1.4e-08 63.5 51 66.7
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 1.2e-07 60.5 36 72.2
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 1.3e-06 57.0 34 61.8


User provided reference genes

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