Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G089900 Populus trichocarpa HOM05D004288 ORTHO05D004997 1.0e-60 236.5 117 100.0
TAR376G0993 Trochodendron aralioides HOM05D004288 ORTHO05D004997 3.9e-15 85.1 120 44.2
Dinv44970 Davidia involucrata HOM05D004288 ORTHO05D004997 2.1e-13 79.3 112 40.2
TAR628G0045 Trochodendron aralioides HOM05D004288 ORTHO05D004997 8.9e-12 73.9 120 42.5
Gohir.D05G211900 Gossypium hirsutum HOM05D004288 ORTHO05D004997 2.2e-10 69.3 108 39.8
Gorai.009G218500 Gossypium raimondii HOM05D004288 ORTHO05D004997 2.2e-10 69.3 108 39.8
GSVIVG01009362001 Vitis vinifera HOM05D004288 ORTHO05D004997 4.9e-10 68.2 111 40.5
Gohir.A05G208400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 1.1e-09 67.0 108 38.9
Rhsim06G0060800 Rhododendron simsii HOM05D004288 ORTHO05D004997 3.2e-09 65.5 116 37.1
GSVIVG01037855001 Vitis vinifera HOM05D004288 ORTHO05D004997 3.2e-09 65.5 121 36.4
CSS0041913 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 7.1e-09 64.3 119 37.0
Duzib116G0008 Durio zibethinus HOM05D004288 ORTHO05D004997 7.1e-09 64.3 109 37.6
Actinidia22683 Actinidia chinensis HOM05D004288 ORTHO05D004997 1.2e-08 63.5 118 36.4
Duzib041G0778 Durio zibethinus HOM05D004288 ORTHO05D004997 1.2e-08 63.5 114 36.0
vmacro21447 Vaccinium macrocarpon HOM05D004288 ORTHO05D004997 1.6e-08 63.2 117 35.0
CiPaw.08G049000 Carya illinoinensis HOM05D004288 ORTHO05D004997 2.1e-08 62.8 114 36.0
Thecc.08G091000 Theobroma cacao HOM05D004288 ORTHO05D004997 2.7e-08 62.4 113 36.3
Actinidia38098 Actinidia chinensis HOM05D004288 ORTHO05D004997 3.5e-08 62.0 119 36.1
CSS0005181 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 3.5e-08 62.0 130 36.9
PSO675G1665 Papaver somniferum HOM05D004288 ORTHO05D004997 3.5e-08 62.0 105 39.0
Prupe.1G424700 Prunus persica HOM05D004288 ORTHO05D004997 3.5e-08 62.0 117 37.6
Ciclev10029597m.g Citrus clementina HOM05D004288 ORTHO05D004997 1.0e-07 60.5 124 36.3
Nitab4.5_0014410g0020 Nicotiana tabacum HOM05D004288 ORTHO05D004997 1.3e-07 60.1 98 38.8
TAR636G2516 Trochodendron aralioides HOM05D004288 ORTHO05D004997 1.3e-07 60.1 64 50.0
Ciclev10002881m.g Citrus clementina HOM05D004288 ORTHO05D004997 1.7e-07 59.7 114 34.2
Aqoxy6G02704 Aquilegia oxysepala HOM05D004288 ORTHO05D004997 2.3e-07 59.3 64 42.2
CiPaw.07G176600 Carya illinoinensis HOM05D004288 ORTHO05D004997 3.0e-07 58.9 117 35.0
Actinidia10187 Actinidia chinensis HOM05D004288 ORTHO05D004997 6.6e-07 57.8 117 35.9
CANSAT25G2350 Cannabis sativa HOM05D004288 ORTHO05D004997 1.1e-06 57.0 117 34.2
CiPaw.04G152800 Carya illinoinensis HOM05D004288 ORTHO05D004997 1.1e-06 57.0 73 38.4
Hma1.2p1_0210F.1_g089620 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 1.1e-06 57.0 57 47.4
Hma1.2p1_0819F.1_g223820 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 1.5e-06 56.6 106 35.8
MBI16_g22811_MAGBIO Magnolia biondii HOM05D004288 ORTHO05D004997 1.9e-06 56.2 118 36.4
Atru.chr13.813 Acer truncatum HOM05D004288 ORTHO05D004997 2.5e-06 55.8 107 33.6
TWI12G0116 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 2.5e-06 55.8 114 36.0
Cfa013675 Carpinus fangiana HOM05D004288 ORTHO05D004997 3.3e-06 55.5 123 32.5
CiPaw.08G113500 Carya illinoinensis HOM05D004288 ORTHO05D004997 4.3e-06 55.1 73 38.4
ClCG05G020460 Citrullus lanatus HOM05D004288 ORTHO05D004997 4.3e-06 55.1 55 45.5
Os03g0206201 Oryza sativa ssp. japonica HOM05D004288 ORTHO05D004997 4.3e-06 55.1 64 43.8
Potri.014G017600 Populus trichocarpa HOM05D004288 ORTHO05D004997 4.3e-06 55.1 126 34.9
Haze_22316 Corylus avellana HOM05D004288 ORTHO05D004997 5.6e-06 54.7 121 33.1
MD08G1087000 Malus domestica HOM05D004288 ORTHO05D004997 5.6e-06 54.7 117 30.8
MD15G1071700 Malus domestica HOM05D004288 ORTHO05D004997 5.6e-06 54.7 109 34.9
Nn1g04602 Nelumbo nucifera HOM05D004288 ORTHO05D004997 7.3e-06 54.3 122 33.6
Nitab4.5_0000569g0070 Nicotiana tabacum HOM05D004288 ORTHO05D004997 9.5e-06 53.9 96 33.3


User provided reference genes

Program Settings