Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 8.1e-194 680.2 348 100.0
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 1.1e-134 483.8 352 73.3
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 8.0e-133 477.6 351 74.4
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 1.1e-49 201.4 345 40.3
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 5.7e-46 189.1 383 38.4
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 3.3e-38 163.3 373 36.5
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 4.1e-36 156.4 356 34.0
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.5e-35 154.5 389 34.7
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 3.4e-35 153.3 363 36.9
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 3.4e-35 153.3 377 33.2
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 3.4e-35 153.3 392 36.2
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 6.1e-32 142.5 371 34.0
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 2.0e-30 137.5 381 31.8
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 3.3e-30 136.7 377 29.4
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 6.3e-29 132.5 364 33.5
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.8e-28 131.0 370 34.1
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 6.9e-28 129.0 360 30.0
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 7.7e-27 125.6 367 30.8
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 2.2e-26 124.0 353 30.0
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 3.2e-25 120.2 383 33.4
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 2.7e-24 117.1 371 29.9
Thecc.02G119800 Theobroma cacao HOM05D016697 ORTHO05D018163 4.7e-24 116.3 368 31.2
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 5.2e-23 112.8 366 30.3
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 2.6e-22 110.5 366 29.5
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 5.7e-22 109.4 373 25.2
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 9.7e-22 108.6 360 27.2
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.3e-21 108.2 363 29.8
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 3.7e-21 106.7 373 31.6
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 1.8e-20 104.4 356 30.9
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 1.8e-20 104.4 356 30.9
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 2.4e-20 104.0 307 31.6
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 2.4e-20 104.0 363 28.4
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 3.1e-20 103.6 357 30.3
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.3e-20 102.8 357 30.5
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 7.0e-20 102.4 142 44.4
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 2.0e-19 100.9 369 30.6
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 2.6e-19 100.5 360 29.7
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 7.7e-19 99.0 376 31.4
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.7e-18 97.8 375 28.5
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 1.7e-18 97.8 425 29.2
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.2e-18 97.4 358 29.1
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 3.8e-18 96.7 408 28.9
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 5.0e-18 96.3 402 29.4
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 1.9e-17 94.4 381 27.8
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 3.2e-17 93.6 355 30.1
COL.COLO4_32486 Corchorus olitorius HOM05D016697 ORTHO05D018163 5.5e-17 92.8 359 25.3
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.7e-16 90.5 358 29.3
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 8.0e-16 89.0 268 31.3
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 8.0e-16 89.0 339 28.9
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.0e-15 88.6 226 34.5
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 1.0e-15 88.6 355 26.5
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.4e-15 88.2 377 27.1
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 2.3e-15 87.4 352 25.9
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 2.3e-15 87.4 374 29.7
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 1.2e-14 85.1 375 28.3
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 1.2e-14 85.1 194 33.0
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 1.2e-14 85.1 370 26.8
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 3.3e-14 83.6 367 26.4
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 4.4e-14 83.2 371 25.9
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 4.4e-14 83.2 375 28.5
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 5.7e-14 82.8 348 26.1
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 7.5e-14 82.4 375 27.5
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 1.7e-13 81.3 348 25.9
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 2.2e-13 80.9 377 27.6
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 3.7e-13 80.1 353 26.6
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 3.7e-13 80.1 348 25.9
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 4.8e-13 79.7 173 37.6
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 4.8e-13 79.7 323 28.2
Ciclev10030239m.g Citrus clementina HOM05D006874 ORTHO05D008334 1.4e-12 78.2 135 37.8
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.8e-12 77.8 376 27.4
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 3.1e-12 77.0 378 26.2
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 5.3e-12 76.3 366 26.2
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.6e-11 74.7 362 26.2
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 4.5e-11 73.2 197 28.9
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 4.5e-11 73.2 354 26.0
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 5.9e-11 72.8 365 26.3
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 7.7e-11 72.4 145 35.9
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 7.7e-11 72.4 354 26.0
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 1.3e-10 71.6 367 27.8
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.7e-10 71.2 354 25.7
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 2.2e-10 70.9 376 22.3
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 5.0e-10 69.7 368 25.5
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 1.1e-09 68.6 353 26.1
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 3.2e-09 67.0 361 27.4
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 3.2e-09 67.0 367 24.0
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 4.2e-09 66.6 362 27.1
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 5.5e-09 66.2 351 27.4
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 7.2e-09 65.9 355 26.5
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 2.1e-08 64.3 345 26.4
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.7e-08 63.9 110 36.4
Gohir.A13G047850 Gossypium hirsutum HOM05D016697 ORTHO05D018163 2.7e-08 63.9 359 27.3
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.4e-07 61.6 375 24.3
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 1.8e-07 61.2 126 31.7
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 3.0e-07 60.5 226 27.9
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 4.0e-07 60.1 387 24.5
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 4.0e-07 60.1 110 33.6
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 8.8e-07 58.9 351 23.4
Gorai.013G051900 Gossypium raimondii HOM05D016697 ORTHO05D018163 1.2e-06 58.5 357 26.6
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 1.2e-06 58.5 372 26.3
Gohir.D13G046200 Gossypium hirsutum HOM05D016697 ORTHO05D018163 2.0e-06 57.8 357 26.1
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 2.6e-06 57.4 364 26.1
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 3.4e-06 57.0 390 24.6


User provided reference genes

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