Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G082200 Populus trichocarpa HOM05D003513 ORTHO05D004660 3.9e-121 438.3 254 100.0
Sabra09G0063800 Salix brachista HOM05D003513 ORTHO05D004660 8.7e-105 384.0 254 90.6
Potri.001G287900 Populus trichocarpa HOM05D003513 ORTHO05D004660 1.0e-84 317.4 254 77.2
Sabra16G0180200 Salix brachista HOM05D003513 ORTHO05D004660 3.8e-76 288.9 249 67.1
Duzib248G1448 Durio zibethinus HOM05D003513 ORTHO05D004660 8.0e-66 254.6 223 65.0
GSVIVG01036987001 Vitis vinifera HOM05D003513 ORTHO05D004660 8.0e-66 254.6 229 63.8
Atru.chr4.2879 Acer truncatum HOM05D003513 ORTHO05D004660 2.0e-64 250.0 201 68.7
Duzib052G1139 Durio zibethinus HOM05D003513 ORTHO05D004660 2.0e-64 250.0 219 65.3
Manes.07G049900 Manihot esculenta HOM05D003513 ORTHO05D004660 2.0e-64 250.0 207 67.1
TWI14G0477 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 4.4e-64 248.8 224 58.0
vmacro01922 Vaccinium macrocarpon HOM05D003513 ORTHO05D004660 4.4e-64 248.8 233 60.9
Cfa003376 Carpinus fangiana HOM05D003513 ORTHO05D004660 7.5e-64 248.1 226 62.4
PGR042G0778 Punica granatum HOM05D003513 ORTHO05D004660 1.1e-62 244.2 217 63.1
Thecc.02G033900 Theobroma cacao HOM05D003513 ORTHO05D004660 3.1e-62 242.7 224 62.1
TWI23G0398 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 3.1e-62 242.7 224 58.0
COL.COLO4_17824 Corchorus olitorius HOM05D003513 ORTHO05D004660 5.4e-62 241.9 216 62.0
Rhsim11G0147300 Rhododendron simsii HOM05D003513 ORTHO05D004660 3.5e-61 239.2 253 56.5
CSS0016653 Camellia sinensis var. sinensis HOM05D003513 ORTHO05D004660 7.7e-61 238.0 228 61.0
QL11p027784 Quercus lobata HOM05D003513 ORTHO05D004660 6.6e-60 235.0 228 64.0
Ciclev10028868m.g Citrus clementina HOM05D003513 ORTHO05D004660 2.5e-59 233.0 205 64.4
Dinv17746 Davidia involucrata HOM05D003513 ORTHO05D004660 3.3e-59 232.6 216 61.6
Hma1.2p1_0661F.1_g197860 Hydrangea macrophylla HOM05D003513 ORTHO05D004660 4.3e-59 232.3 217 59.0
ClCG02G003790 Citrullus lanatus HOM05D003513 ORTHO05D004660 5.6e-59 231.9 216 62.5
RcHm_v2.0_Chr6g0247131 Rosa chinensis HOM05D003513 ORTHO05D004660 7.3e-59 231.5 224 61.6
CsaV3_7G001360 Cucumis sativus L. HOM05D003513 ORTHO05D004660 9.5e-59 231.1 221 61.5
Actinidia02426 Actinidia chinensis HOM05D003513 ORTHO05D004660 1.6e-58 230.3 212 63.2
MELO3C013317.2 Cucumis melo HOM05D003513 ORTHO05D004660 3.6e-58 229.2 217 62.7
Cfa004752 Carpinus fangiana HOM05D003513 ORTHO05D004660 6.1e-58 228.4 212 62.3
Actinidia00338 Actinidia chinensis HOM05D003513 ORTHO05D004660 1.4e-57 227.3 229 59.4
FAN24G3528 Fragaria x ananassa HOM05D003513 ORTHO05D004660 1.8e-57 226.9 224 60.3
TAR375G0591 Trochodendron aralioides HOM05D003513 ORTHO05D004660 1.8e-57 226.9 225 60.9
Gohir.A03G213100 Gossypium hirsutum HOM05D003513 ORTHO05D004660 2.3e-57 226.5 228 62.3
Prupe.8G155900 Prunus persica HOM05D003513 ORTHO05D004660 2.3e-57 226.5 215 60.5
FAN27G0638 Fragaria x ananassa HOM05D003513 ORTHO05D004660 4.0e-57 225.7 224 60.3
FvH4_2g02710 Fragaria vesca HOM05D003513 ORTHO05D004660 5.2e-57 225.3 224 59.4
FAN20G2897 Fragaria x ananassa HOM05D003513 ORTHO05D004660 4.4e-56 222.2 224 59.4
CANSAT11G1387 Cannabis sativa HOM05D003513 ORTHO05D004660 7.5e-56 221.5 207 61.4
Lj9A339T51 Lonicera japonica HOM05D003513 ORTHO05D004660 1.3e-55 220.7 213 59.6
FAN15G2646 Fragaria x ananassa HOM05D003513 ORTHO05D004660 3.7e-55 219.2 224 58.9
MD05G1110900 Malus domestica HOM05D003513 ORTHO05D004660 3.7e-55 219.2 224 58.5
Gohir.D02G234600 Gossypium hirsutum HOM05D003513 ORTHO05D004660 4.9e-55 218.8 204 61.8
Eucgr.I02512 Eucalyptus grandis HOM05D003513 ORTHO05D004660 1.4e-54 217.2 208 58.7
Oeu010478.1 Olea europaea HOM05D003513 ORTHO05D004660 1.4e-54 217.2 227 55.5
MSTRG.8971 Avicennia marina HOM05D003513 ORTHO05D004660 4.6e-53 212.2 231 56.7
CiPaw.16G055200 Carya illinoinensis HOM05D003513 ORTHO05D004660 5.9e-53 211.8 208 59.1
Gorai.005G262600 Gossypium raimondii HOM05D003513 ORTHO05D004660 7.8e-53 211.5 227 57.3
Medtr2g010510 Medicago truncatula HOM05D003513 ORTHO05D004660 2.3e-52 209.9 216 55.6
Cc02_g20350 Coffea canephora HOM05D003513 ORTHO05D004660 2.5e-51 206.5 228 56.1
Sopen01g048910 Solanum pennellii HOM05D003513 ORTHO05D004660 3.3e-51 206.1 229 56.8
PGSC0003DMG400005104 Solanum tuberosum HOM05D003513 ORTHO05D004660 4.3e-51 205.7 229 56.3
Solyc01g106560.4 Solanum lycopersicum HOM05D003513 ORTHO05D004660 7.3e-51 204.9 229 56.8
Peaxi162Scf00016g03328 Petunia axillaris HOM05D003513 ORTHO05D004660 9.5e-51 204.5 229 57.6
EL10Ac4g09206 Beta vulgaris HOM05D003513 ORTHO05D004660 1.6e-50 203.8 242 50.4
SGA_v2.0_scaffold32G12967 Striga asiatica HOM05D003513 ORTHO05D004660 2.8e-50 203.0 210 55.2
Oeu059873.1 Olea europaea HOM05D003513 ORTHO05D004660 3.6e-50 202.6 228 55.3
arahy.Tifrunner.gnm1.ann1.2E8PRH Arachis hypogaea HOM05D003513 ORTHO05D004660 6.2e-50 201.8 261 49.0
MSTRG.8970 Avicennia marina HOM05D003513 ORTHO05D004660 6.2e-50 201.8 231 54.1
Ca_00197_v3 Cicer arietinum L. HOM05D000871 ORTHO05D000770 8.0e-50 201.4 203 55.7
arahy.Tifrunner.gnm1.ann1.K4QFJX Arachis hypogaea HOM05D003513 ORTHO05D004660 1.4e-49 200.7 261 48.3
SalBow6G6243 Salvia bowleyana HOM05D003513 ORTHO05D004660 1.8e-49 200.3 226 53.5
arahy.Tifrunner.gnm1.ann1.SQB86K Arachis hypogaea HOM05D003513 ORTHO05D004660 3.1e-49 199.5 261 48.7
Lalb_Chr18g0060191 Lupinus albus HOM05D003513 ORTHO05D004660 5.2e-49 198.7 266 47.7
MBI18_g04900_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 5.2e-49 198.7 229 52.4
Sed0007617 Sechium edule HOM05D003513 ORTHO05D004660 8.9e-49 198.0 204 57.4
PSO384G0236 Papaver somniferum HOM05D003513 ORTHO05D004660 1.2e-48 197.6 219 56.6
PSO339G4304 Papaver somniferum HOM05D003513 ORTHO05D004660 1.5e-48 197.2 209 56.9
VMungo0540G2261 Vigna mungo HOM05D003513 ORTHO05D004660 1.5e-48 197.2 248 50.4
Lj6g0027000 Lotus japonicus HOM05D003513 ORTHO05D004660 4.4e-48 195.7 247 48.6
CiPaw.05G024600 Carya illinoinensis HOM05D003513 ORTHO05D004660 9.8e-48 194.5 225 53.3
Nn4g22684 Nelumbo nucifera HOM05D003513 ORTHO05D004660 3.7e-47 192.6 330 41.5
Glyma.15G062000 Glycine max HOM05D003513 ORTHO05D004660 6.4e-47 191.8 257 48.2
Lj1g0004946 Lotus japonicus HOM05D003513 ORTHO05D004660 8.3e-47 191.4 225 52.4
MBI18_g12443_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 3.2e-46 189.5 225 51.6
THA.LOC104807196 Tarenaya hassleriana HOM05D003513 ORTHO05D004660 3.2e-46 189.5 197 56.3
Aqoxy5G03939 Aquilegia oxysepala HOM05D003513 ORTHO05D004660 5.4e-46 188.7 229 52.4
Glyma.13G253000 Glycine max HOM05D003513 ORTHO05D004660 1.2e-45 187.6 262 48.1
arahy.Tifrunner.gnm1.ann1.C4ZNB5 Arachis hypogaea HOM05D003513 ORTHO05D004660 6.0e-45 185.3 265 45.3
Lsat_1_v5_gn_7_84220 Lactuca sativa HOM05D003513 ORTHO05D004660 6.0e-45 185.3 230 48.7
Sp3g05980 Schrenkiella parvula HOM05D003513 ORTHO05D004660 6.0e-45 185.3 229 49.8
SHI04900 Sapria himalayana HOM05D003513 ORTHO05D004660 7.8e-45 184.9 186 58.6
Lj6g0027758 Lotus japonicus HOM05D003513 ORTHO05D004660 1.3e-44 184.1 277 44.0
DCAR_029853 Daucus carota HOM05D003513 ORTHO05D004660 2.3e-44 183.3 261 43.7
Aa31LG8G12720 Aethionema arabicum HOM05D003513 ORTHO05D004660 1.1e-43 181.0 223 50.2
ECA236G2279 Erigeron canadensis HOM05D003513 ORTHO05D004660 1.1e-43 181.0 220 54.5
unitig_0.g631 Utricularia gibba HOM05D003513 ORTHO05D004660 7.3e-43 178.3 202 54.0
Cpa.g.sc20.72 Carica papaya HOM05D003513 ORTHO05D004660 1.2e-42 177.6 149 63.8
Atru.chr5.2163 Acer truncatum HOM05D003513 ORTHO05D004660 1.6e-42 177.2 149 67.1
Dinv03362 Davidia involucrata HOM05D003513 ORTHO05D004660 1.6e-42 177.2 149 65.1
Psat1g212080 Pisum sativum HOM05D003513 ORTHO05D004660 1.6e-42 177.2 191 54.5
Os07g0213400 Oryza sativa ssp. japonica HOM05D003513 ORTHO05D004660 1.4e-41 174.1 204 50.5
MD10G1114400 Malus domestica HOM05D003513 ORTHO05D004660 4.0e-41 172.6 215 49.8
AL7G17790 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 1.5e-40 170.6 225 48.9
AL3G45960 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 4.4e-40 169.1 221 46.2
C03p42610 Brassica napus HOM05D003513 ORTHO05D004660 7.5e-40 168.3 227 48.0
Zm00001eb325060 Zea mays HOM05D003513 ORTHO05D004660 2.9e-39 166.4 219 48.4
A03p35030 Brassica napus HOM05D003513 ORTHO05D004660 6.4e-39 165.2 241 46.1
BraA03t12683Z Brassica rapa HOM05D003513 ORTHO05D004660 1.9e-38 163.7 229 48.9
Carub.0003s2847 Capsella rubella HOM05D003513 ORTHO05D004660 5.4e-38 162.2 221 47.1
CDE04G2077 Ceratophyllum demersum HOM05D000016 ORTHO05D000538 5.4e-38 162.2 190 49.5
HanXRQChr17g0550541 Helianthus annuus HOM05D003513 ORTHO05D004660 1.6e-37 160.6 204 51.5
Sp7g31420 Schrenkiella parvula HOM05D003513 ORTHO05D004660 1.6e-37 160.6 220 46.8
ATR0681G195 Amborella trichopoda HOM05D003513 ORTHO05D004660 3.5e-37 159.5 259 40.5
AUR62005013 Chenopodium quinoa HOM05D003513 ORTHO05D004660 1.0e-36 157.9 210 47.6
HPP92_011751 Vanilla planifolia HOM05D003513 ORTHO05D004660 1.3e-36 157.5 248 43.5
C01p05020 Brassica napus HOM05D003513 ORTHO05D004660 3.0e-36 156.4 221 47.1
BcaC09g52179 Brassica carinata HOM05D003513 ORTHO05D004660 6.6e-36 155.2 222 47.3
BolC1t00484H Brassica oleracea HOM05D003513 ORTHO05D004660 6.6e-36 155.2 222 47.3
CDE07G1727 Ceratophyllum demersum HOM05D003513 ORTHO05D004660 8.6e-36 154.8 253 43.1
BcaB07g32937 Brassica carinata HOM05D003513 ORTHO05D004660 1.1e-35 154.5 195 51.8
BolC3t16531H Brassica oleracea HOM05D003513 ORTHO05D004660 3.3e-35 152.9 226 45.6
BraA01t00446Z Brassica rapa HOM05D003513 ORTHO05D004660 1.2e-34 151.0 226 47.3
AT4G33690 Arabidopsis thaliana HOM05D003513 ORTHO05D004660 2.8e-34 149.8 204 46.1
Nitab4.5_0001477g0150 Nicotiana tabacum HOM05D003513 ORTHO05D004660 1.1e-33 147.9 229 47.2
SMO119G0189 Selaginella moellendorffii HOM05D003513 ORTHO05D004660 2.6e-32 143.3 202 45.0
AUR62000955 Chenopodium quinoa HOM05D003513 ORTHO05D004660 5.8e-32 142.1 208 42.3
A01p04630 Brassica napus HOM05D003513 ORTHO05D004660 1.3e-31 141.0 229 44.1
HPP92_025257 Vanilla planifolia HOM05D003513 ORTHO05D004660 1.2e-29 134.4 207 42.0
Mapoly0037s0029 Marchantia polymorpha HOM05D003513 ORTHO05D004660 2.7e-29 133.3 232 44.4
SEGI_16177 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 6.0e-29 132.1 275 36.0
BraA01t02793Z Brassica rapa HOM05D004336 ORTHO05D004660 1.0e-28 131.3 220 41.4
Hund24144 Selenicereus undatus HOM05D003513 ORTHO05D004660 1.7e-28 130.6 159 51.6
AagrBONN_evm.TU.Sc2ySwM_289.2 Anthoceros agrestis HOM05D003513 ORTHO05D004660 2.3e-28 130.2 258 39.1
AagrBONN_evm.TU.Sc2ySwM_362.2667 Anthoceros agrestis HOM05D003513 ORTHO05D004660 2.3e-28 130.2 258 39.1
Pp3c17_21630 Physcomitrium patens HOM05D003513 ORTHO05D004660 8.6e-28 128.3 232 40.1
Carub.0007s0673 Capsella rubella HOM05D003513 ORTHO05D004660 1.5e-27 127.5 151 51.7
Nitab4.5_0007763g0010 Nicotiana tabacum HOM05D003513 ORTHO05D004660 4.3e-27 125.9 172 50.0
Eucgr.L02047 Eucalyptus grandis HOM05D003513 ORTHO05D004660 7.3e-27 125.2 143 49.7
SEGI_38183 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 2.8e-26 123.2 230 39.6
BcaC04g20358 Brassica carinata HOM05D003513 ORTHO05D004660 5.2e-25 119.0 195 42.6
Sc21g0000900 Simmondsia chinensis HOM05D003513 ORTHO05D004660 6.9e-25 118.6 159 48.4
CAN.G192.6 Capsicum annuum HOM05D003513 ORTHO05D004660 1.5e-24 117.5 176 48.3
TAR629G2534 Trochodendron aralioides HOM05D003513 ORTHO05D004660 1.3e-23 114.4 116 57.8
Migut.B00497 Erythranthe guttata HOM05D003513 ORTHO05D004660 4.9e-23 112.5 161 47.2
A05p21550 Brassica napus HOM05D003513 ORTHO05D004660 3.2e-22 109.8 202 40.6
BraA05t21075Z Brassica rapa HOM05D003513 ORTHO05D004660 3.2e-22 109.8 202 40.6
TPR.G22787 Trifolium pratense HOM05D003513 ORTHO05D004660 4.2e-22 109.4 138 51.4
BcaB04g17698 Brassica carinata HOM05D003513 ORTHO05D004660 2.1e-21 107.1 205 40.0
BcaB02g10961 Brassica carinata HOM05D003513 ORTHO05D004660 2.3e-20 103.6 85 65.9
Phvul.006G197800 Phaseolus vulgaris HOM05D003513 ORTHO05D004660 1.1e-19 101.3 178 42.1
Glyma.07G229300 Glycine max HOM05D003513 ORTHO05D004660 4.3e-19 99.4 73 67.1
Thhalv10021452m.g Eutrema salsugineum HOM05D003513 ORTHO05D004660 3.6e-18 96.3 176 39.2
TWI59G0638 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 8.1e-18 95.1 111 50.5
A09p29610 Brassica napus HOM05D003513 ORTHO05D004660 1.1e-17 94.7 169 42.0
Zm00001eb303370 Zea mays HOM05D003513 ORTHO05D004660 2.4e-17 93.6 137 43.1
A04p04130 Brassica napus HOM05D003513 ORTHO05D004660 3.1e-17 93.2 185 38.4
BcaC08g44431 Brassica carinata HOM05D003513 ORTHO05D013524 9.0e-17 91.7 190 37.9
BolC8t52234H Brassica oleracea HOM05D003513 ORTHO05D004660 2.0e-16 90.5 195 39.5
A08p11320 Brassica napus HOM05D003513 ORTHO05D004660 1.3e-15 87.8 58 74.1
A10p16400 Brassica napus HOM05D003513 ORTHO05D004660 1.3e-15 87.8 58 74.1
C06p15560 Brassica napus HOM05D003513 ORTHO05D004660 1.3e-15 87.8 58 74.1
C08p23080 Brassica napus HOM05D003513 ORTHO05D004660 1.3e-15 87.8 58 74.1
C08p46960 Brassica napus HOM05D003513 ORTHO05D013524 2.2e-15 87.0 195 39.0
CARHR105270 Cardamine hirsuta HOM05D003513 ORTHO05D004660 2.2e-15 87.0 173 40.5
BraA03t15374Z Brassica rapa HOM05D003513 ORTHO05D004660 2.9e-15 86.7 185 37.3
A03p66860 Brassica napus HOM05D003513 ORTHO05D004660 3.8e-15 86.3 60 70.0
A09p33590 Brassica napus HOM05D003513 ORTHO05D004660 4.9e-15 85.9 56 75.0
C06p18710 Brassica napus HOM05D003513 ORTHO05D004660 6.4e-15 85.5 58 70.7
A03p61430 Brassica napus HOM05D003513 ORTHO05D004660 1.4e-14 84.3 56 73.2
BraA09t38150Z Brassica rapa HOM05D003513 ORTHO05D004660 1.9e-14 84.0 75 60.0
Gohir.A01G179633 Gossypium hirsutum HOM05D003513 ORTHO05D004660 7.9e-13 78.6 51 74.5
C01p31670 Brassica napus HOM05D003513 ORTHO05D015800 1.3e-12 77.8 54 70.4
Gorai.002G212100 Gossypium raimondii HOM05D003513 ORTHO05D004660 1.9e-11 73.9 51 72.5
A05p23280 Brassica napus HOM05D003513 ORTHO05D004660 1.1e-09 68.2 46 69.6
BraA05t21192Z Brassica rapa HOM05D003513 ORTHO05D004660 1.1e-09 68.2 46 69.6
TAR636G1841 Trochodendron aralioides HOM05D003513 ORTHO05D004660 2.6e-08 63.5 93 45.2
BcaB05g23799 Brassica carinata HOM05D003513 ORTHO05D004660 3.4e-08 63.2 119 39.5
Gohir.A10G119000 Gossypium hirsutum HOM05D001046 ORTHO05D005883 1.3e-07 61.2 63 55.6
MCO09G316 Micromonas commoda HOM05D003513 ORTHO05D004660 2.2e-07 60.5 175 29.1
BcaC06g33105 Brassica carinata HOM05D005554 ORTHO05D021652 2.9e-07 60.1 60 53.3
CBR_g21766 Chara braunii HOM05D003513 ORTHO05D004660 1.1e-06 58.2 139 33.1
BolC1t03102H Brassica oleracea HOM05D003531 ORTHO05D015800 5.5e-06 55.8 36 72.2
Dinv09506 Davidia involucrata HOM05D003513 ORTHO05D004660 9.3e-06 55.1 64 50.0


User provided reference genes

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