Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 1.8e-87 325.9 161 100.0
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 7.5e-78 293.9 161 88.8
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 2.1e-67 259.2 161 80.1
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 1.2e-64 250.0 161 78.3
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 1.3e-56 223.4 164 71.3
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 1.3e-48 196.8 164 63.4
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 2.1e-48 196.1 164 63.4
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 1.2e-46 190.3 164 61.0
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 2.6e-46 189.1 166 59.0
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 1.9e-44 183.0 162 59.9
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 3.5e-43 178.7 164 57.9
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 4.6e-43 178.3 163 58.9
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 2.3e-42 176.0 163 55.8
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 1.9e-41 172.9 166 57.2
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 9.6e-41 170.6 161 55.9
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 4.8e-40 168.3 160 55.0
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 2.0e-38 162.9 171 50.9
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 2.6e-38 162.5 160 51.9
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 4.5e-38 161.8 160 51.9
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 5.8e-38 161.4 160 51.9
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 7.6e-38 161.0 162 56.2
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.3e-37 160.2 153 54.9
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 1.7e-37 159.8 167 53.9
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 8.4e-37 157.5 153 53.6
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 3.2e-36 155.6 161 53.4
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 3.2e-36 155.6 160 50.6
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 3.2e-36 155.6 160 50.6
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 4.2e-36 155.2 153 53.6
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 7.1e-36 154.5 162 50.0
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 1.6e-35 153.3 172 49.4
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 7.9e-35 151.0 142 56.3
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 1.0e-34 150.6 145 54.5
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 1.3e-34 150.2 163 54.6
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 5.1e-34 148.3 171 47.4
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 3.3e-33 145.6 119 58.8
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 4.3e-33 145.2 169 49.7
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 4.3e-33 145.2 169 50.9
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 3.7e-32 142.1 119 56.3
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 4.8e-32 141.7 149 50.3
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 6.3e-32 141.4 126 54.8
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 1.8e-31 139.8 141 53.2
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 1.8e-31 139.8 123 57.7
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 5.3e-31 138.3 157 49.0
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 9.0e-31 137.5 161 47.8
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.2e-30 137.1 162 44.4
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 1.5e-30 136.7 163 47.2
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 2.0e-30 136.3 136 51.5
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 2.6e-30 136.0 170 44.7
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 4.5e-30 135.2 179 45.3
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 1.3e-29 133.7 170 44.7
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 1.7e-29 133.3 159 49.1
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 8.5e-29 131.0 147 47.6
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 3.6e-27 125.6 109 58.7
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 3.9e-26 122.1 133 49.6
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 6.7e-26 121.3 127 48.8
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 1.1e-25 120.6 121 56.2
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 1.5e-25 120.2 129 51.2
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 1.5e-25 120.2 120 50.0
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 2.5e-25 119.4 136 49.3
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 5.7e-25 118.2 128 50.8
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 7.4e-25 117.9 126 50.8
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 7.4e-25 117.9 126 50.8
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 7.4e-25 117.9 134 45.5
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 9.7e-25 117.5 128 50.8
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 9.7e-25 117.5 144 46.5
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 1.3e-24 117.1 138 47.1
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 1.7e-24 116.7 135 46.7
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 2.2e-24 116.3 126 50.0
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 2.8e-24 115.9 126 54.8
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 2.8e-24 115.9 133 44.4
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 8.2e-24 114.4 133 43.6
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 8.2e-24 114.4 140 45.0
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 1.1e-23 114.0 131 47.3
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 1.1e-23 114.0 140 50.0
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 3.1e-23 112.5 153 39.2
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 4.1e-23 112.1 125 48.0
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 5.3e-23 111.7 137 47.4
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 1.5e-22 110.2 134 42.5
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 2.0e-22 109.8 126 46.0
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 2.6e-22 109.4 128 39.1
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 4.5e-22 108.6 132 42.4
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 1.0e-21 107.5 128 46.9
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 1.3e-21 107.1 110 43.6
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 1.7e-21 106.7 166 38.0
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 2.2e-21 106.3 150 41.3
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 1.1e-20 104.0 144 40.3
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 1.4e-20 103.6 117 46.2
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 7.2e-20 101.3 72 69.4
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 1.0e-18 97.4 173 35.8
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 2.8e-16 89.4 120 43.3
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 2.4e-15 86.3 69 58.0
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 6.9e-15 84.7 65 58.5
TAR376G1104 Trochodendron aralioides HOM05D007716 ORTHO05D009780 2.2e-13 79.7 64 60.9
Actinidia00328 Actinidia chinensis HOM05D001826 ORTHO05D007448 7.4e-09 64.7 117 42.7
Actinidia23910 Actinidia chinensis HOM05D001242 ORTHO05D001089 3.7e-08 62.4 48 60.4
CDE07G1646 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 7.7e-06 54.7 98 34.7


User provided reference genes

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