Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G072201 Populus trichocarpa HOM05D009283 ORTHO05D011386 3.1e-31 137.9 72 100.0
Potri.001G277600 Populus trichocarpa HOM05D009283 ORTHO05D011386 1.8e-26 122.1 71 87.3
Sabra16G0171600 Salix brachista HOM05D009283 ORTHO05D011386 1.9e-25 118.6 73 87.7
Sabra09G0054400 Salix brachista HOM05D009283 ORTHO05D011386 3.9e-18 94.4 125 50.4
MD11G1071800 Malus domestica HOM05D009283 ORTHO05D011386 2.0e-14 82.0 77 59.7
Prupe.6G055500 Prunus persica HOM05D009283 ORTHO05D011386 3.4e-14 81.3 77 58.4
MD03G1067000 Malus domestica HOM05D009283 ORTHO05D011386 4.5e-14 80.9 77 62.3
QL01p038697 Quercus lobata HOM05D009283 ORTHO05D011386 2.9e-13 78.2 72 62.5
Manes.01G160300 Manihot esculenta HOM05D009283 ORTHO05D011386 3.2e-12 74.7 71 57.7
Duzib150G0426 Durio zibethinus HOM05D009283 ORTHO05D011386 1.6e-11 72.4 76 52.6
Gohir.D09G089500 Gossypium hirsutum HOM05D009283 ORTHO05D011386 2.7e-11 71.6 76 52.6
Gorai.006G105700 Gossypium raimondii HOM05D009283 ORTHO05D011386 2.7e-11 71.6 76 52.6
Duzib168G1848 Durio zibethinus HOM05D009283 ORTHO05D011386 7.9e-11 70.1 68 52.9
CSS0042268 Camellia sinensis var. sinensis HOM05D009283 ORTHO05D011386 1.0e-10 69.7 73 53.4
Gohir.A09G089400 Gossypium hirsutum HOM05D009283 ORTHO05D011386 1.0e-10 69.7 76 51.3
AT1G07175 Arabidopsis thaliana HOM05D009317 ORTHO05D011493 1.4e-10 69.3 69 52.2
AL1G17300 Arabidopsis lyrata HOM05D009317 ORTHO05D011493 8.8e-10 66.6 68 54.4
CSS0001488 Camellia sinensis var. sinensis HOM05D009283 ORTHO05D011386 1.1e-09 66.2 74 51.4
RcHm_v2.0_Chr5g0070101 Rosa chinensis HOM05D009283 ORTHO05D011386 1.5e-09 65.9 71 56.3
FAN16G2697 Fragaria x ananassa HOM05D009283 ORTHO05D011386 2.0e-09 65.5 80 55.0
FAN21G2028 Fragaria x ananassa HOM05D009283 ORTHO05D011386 3.3e-09 64.7 80 55.0
THA.LOC104800743 Tarenaya hassleriana HOM05D009317 ORTHO05D011493 4.3e-09 64.3 68 48.5
FAN25G2033 Fragaria x ananassa HOM05D009283 ORTHO05D011386 5.7e-09 63.9 80 55.0
FvH4_3g38890 Fragaria vesca HOM05D009283 ORTHO05D011386 7.4e-09 63.5 82 52.4
THA.LOC109116766 Tarenaya hassleriana HOM05D009317 ORTHO05D011493 9.7e-09 63.2 69 55.1
vmacro14601 Vaccinium macrocarpon HOM05D009283 ORTHO05D011386 9.7e-09 63.2 75 54.7
TWI79G0118 Tripterygium wilfordii HOM05D009283 ORTHO05D011386 1.3e-08 62.8 73 53.4
C05p05260 Brassica napus HOM05D009317 ORTHO05D011493 5.3e-07 57.4 69 47.8
Carub.0001s0647 Capsella rubella HOM05D009317 ORTHO05D011493 5.3e-07 57.4 71 47.9
TAR636G0553 Trochodendron aralioides HOM05D009283 ORTHO05D011386 5.3e-07 57.4 80 47.5
Gorai.013G259800 Gossypium raimondii HOM05D009283 ORTHO05D011386 9.1e-07 56.6 63 46.0
Thhalv10009260m.g Eutrema salsugineum HOM05D009317 ORTHO05D011493 1.2e-06 56.2 69 49.3
Lalb_Chr18g0051051 Lupinus albus HOM05D016533 ORTHO05D018486 1.2e-06 56.2 79 51.9
Solyc06g082020.4 Solanum lycopersicum HOM05D039108 ORTHO05D033972 1.2e-06 56.2 72 45.8
Sopen06g033420 Solanum pennellii HOM05D039108 ORTHO05D033972 1.2e-06 56.2 72 45.8
A08p35730 Brassica napus HOM05D009317 ORTHO05D011493 1.5e-06 55.8 71 47.9
BraA08t35480Z Brassica rapa HOM05D009317 ORTHO05D011493 1.5e-06 55.8 71 47.9
Gohir.A13G224100 Gossypium hirsutum HOM05D009283 ORTHO05D011386 1.5e-06 55.8 66 45.5
Gohir.D13G228850 Gossypium hirsutum HOM05D009283 ORTHO05D011386 1.5e-06 55.8 69 46.4
A10p05740 Brassica napus HOM05D009317 ORTHO05D011493 2.0e-06 55.5 68 48.5
BraA10t42835Z Brassica rapa HOM05D009317 ORTHO05D011493 2.0e-06 55.5 68 48.5
C08p02940 Brassica napus HOM05D009317 ORTHO05D011493 3.4e-06 54.7 71 46.5
BolC5t29297H Brassica oleracea HOM05D009317 ORTHO05D011493 3.4e-06 54.7 68 47.1
BolC8t47093H Brassica oleracea HOM05D009317 ORTHO05D011493 3.4e-06 54.7 71 46.5
Sp4g12560 Schrenkiella parvula HOM05D009317 ORTHO05D011493 3.4e-06 54.7 62 48.4
Carub.0004s1108 Capsella rubella HOM05D009317 ORTHO05D011493 4.5e-06 54.3 67 52.2
AL4G24750 Arabidopsis lyrata HOM05D009317 ORTHO05D011493 7.7e-06 53.5 60 48.3
AT2G29995 Arabidopsis thaliana HOM05D009317 ORTHO05D011493 7.7e-06 53.5 65 49.2


User provided reference genes

Program Settings