Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G059100 Populus trichocarpa HOM05D007963 ORTHO05D009967 1.2e-61 239.6 119 100.0
Sabra09G0043500 Salix brachista HOM05D007963 ORTHO05D009967 5.6e-46 187.6 109 85.3
Manes.07G007300 Manihot esculenta HOM05D007963 ORTHO05D009967 4.3e-38 161.4 119 68.1
Duzib133G0999 Durio zibethinus HOM05D007963 ORTHO05D009967 2.0e-35 152.5 119 63.0
Thecc.01G408600 Theobroma cacao HOM05D007963 ORTHO05D009967 4.5e-35 151.4 120 64.2
vmacro13678 Vaccinium macrocarpon HOM05D007963 ORTHO05D009967 9.3e-33 143.7 119 65.5
QL04p008099 Quercus lobata HOM05D007963 ORTHO05D009967 1.1e-30 136.7 118 63.6
QL04p008549 Quercus lobata HOM05D007963 ORTHO05D009967 1.1e-30 136.7 118 63.6
CSS0005909 Camellia sinensis var. sinensis HOM05D007963 ORTHO05D009967 5.7e-30 134.4 120 59.2
CiPaw.13G006800 Carya illinoinensis HOM05D007963 ORTHO05D009967 5.7e-30 134.4 117 58.1
Atru.chr11.2601 Acer truncatum HOM05D007963 ORTHO05D009967 1.3e-29 133.3 122 58.2
Ciclev10033085m.g Citrus clementina HOM05D007963 ORTHO05D009967 2.1e-29 132.5 120 57.5
Cfa010795 Carpinus fangiana HOM05D007963 ORTHO05D009967 8.2e-29 130.6 117 57.3
Nn2g15279 Nelumbo nucifera HOM05D007963 ORTHO05D009967 1.8e-28 129.4 119 58.0
TAR369G0233 Trochodendron aralioides HOM05D007963 ORTHO05D009967 2.4e-28 129.0 117 60.7
Haze_03176 Corylus avellana HOM05D007963 ORTHO05D009967 3.1e-28 128.6 117 56.4
CiPaw.14G001400 Carya illinoinensis HOM05D007963 ORTHO05D009967 2.6e-27 125.6 116 55.2
Rhsim07G0056600 Rhododendron simsii HOM05D007963 ORTHO05D009967 5.8e-27 124.4 122 58.2
MSTRG.20574 Avicennia marina HOM05D007963 ORTHO05D009967 3.8e-26 121.7 115 58.3
SalBow5G1437 Salvia bowleyana HOM05D007963 ORTHO05D009967 5.0e-26 121.3 119 57.1
SalBow5G4167 Salvia bowleyana HOM05D007963 ORTHO05D009967 5.0e-26 121.3 119 57.1
RcHm_v2.0_Chr7g0228141 Rosa chinensis HOM05D007963 ORTHO05D009967 6.5e-26 120.9 121 57.9
EL10Ac2g04344 Beta vulgaris HOM05D002263 ORTHO05D003537 8.4e-26 120.6 118 51.7
MBI04_g34432_MAGBIO Magnolia biondii HOM05D007963 ORTHO05D009967 3.2e-25 118.6 119 57.1
FvH4_5g32100 Fragaria vesca HOM05D007963 ORTHO05D009967 5.5e-25 117.9 121 55.4
PGSC0003DMG400023738 Solanum tuberosum HOM05D007963 ORTHO05D009967 3.5e-24 115.2 122 53.3
DCAR_003219 Daucus carota HOM05D007963 ORTHO05D009967 4.6e-24 114.8 121 52.1
Sc23g0005920 Simmondsia chinensis HOM05D007963 ORTHO05D009967 3.9e-23 111.7 120 56.7
Sopen10g031160 Solanum pennellii HOM05D007963 ORTHO05D009967 6.7e-23 110.9 89 60.7
Eucgr.J01210 Eucalyptus grandis HOM05D007963 ORTHO05D009967 1.5e-22 109.8 115 51.3
Gorai.004G171400 Gossypium raimondii HOM05D007963 ORTHO05D009967 1.9e-22 109.4 126 51.6
SGA_v2.0_scaffold4G02518 Striga asiatica HOM05D007963 ORTHO05D009967 1.9e-22 109.4 118 50.8
ClCG10G012280 Citrullus lanatus HOM05D007963 ORTHO05D009967 3.3e-22 108.6 92 58.7
Prupe.2G017200 Prunus persica HOM05D007963 ORTHO05D009967 7.4e-22 107.5 98 60.2
Gohir.A08G143400 Gossypium hirsutum HOM05D007963 ORTHO05D009967 1.6e-21 106.3 126 50.8
Lsat_1_v5_gn_1_105740 Lactuca sativa HOM05D007963 ORTHO05D009967 6.3e-21 104.4 116 50.0
TWI09G0461 Tripterygium wilfordii HOM05D007963 ORTHO05D009967 6.3e-21 104.4 120 53.3
Migut.B01286 Erythranthe guttata HOM05D007963 ORTHO05D009967 8.2e-21 104.0 113 53.1
HanXRQChr01g0016481 Helianthus annuus HOM05D007963 ORTHO05D009967 8.2e-21 104.0 119 48.7
Gohir.D08G164400 Gossypium hirsutum HOM05D007963 ORTHO05D009967 1.1e-20 103.6 126 50.0
COL.COLO4_04871 Corchorus olitorius HOM05D007963 ORTHO05D009967 1.8e-20 102.8 133 46.6
AUR62009397 Chenopodium quinoa HOM05D007963 ORTHO05D009967 5.3e-20 101.3 90 55.6
Lj3g0025556 Lotus japonicus HOM05D007963 ORTHO05D009967 5.3e-20 101.3 120 46.7
MELO3C023985.2 Cucumis melo HOM05D007963 ORTHO05D009967 1.5e-19 99.8 125 50.4
MD02G1308200 Malus domestica HOM05D007963 ORTHO05D009967 2.6e-19 99.0 94 56.4
Sed0005364 Sechium edule HOM05D007963 ORTHO05D009967 4.5e-19 98.2 118 50.8
CsaV3_3G032070 Cucumis sativus L. HOM05D007963 ORTHO05D009967 3.8e-18 95.1 123 48.8
Hma1.2p1_2160F.1_g315600 Hydrangea macrophylla HOM05D007963 ORTHO05D009967 5.0e-18 94.7 70 62.9
VMungo1127G0040 Vigna mungo HOM05D007963 ORTHO05D009967 6.5e-18 94.4 101 49.5
Sed0018324 Sechium edule HOM05D007963 ORTHO05D009967 2.5e-17 92.4 117 45.3
Lalb_Chr20g0107921 Lupinus albus HOM05D007963 ORTHO05D009967 2.1e-16 89.4 98 52.0
Os03g0217000 Oryza sativa ssp. japonica HOM05D007963 ORTHO05D009967 1.0e-15 87.0 59 62.7
unitig_61.g26362 Utricularia gibba HOM05D007963 ORTHO05D009967 1.4e-15 86.7 50 74.0
Glyma.12G008400 Glycine max HOM05D007963 ORTHO05D009967 1.1e-14 83.6 107 47.7
Zm00001eb400040 Zea mays HOM05D007963 ORTHO05D009967 2.5e-14 82.4 56 66.1
Thhalv10010836m.g Eutrema salsugineum HOM05D007963 ORTHO05D009967 3.1e-12 75.5 114 42.1
Medtr4g039540 Medicago truncatula HOM05D007963 ORTHO05D009967 4.1e-12 75.1 123 43.1
CARHR161770 Cardamine hirsuta HOM05D007963 ORTHO05D009967 6.9e-12 74.3 118 38.1
Phvul.011G012801 Phaseolus vulgaris HOM05D007963 ORTHO05D009967 9.1e-12 73.9 56 57.1
Carub.0005s1839 Capsella rubella HOM05D007963 ORTHO05D009967 2.6e-11 72.4 122 41.8
Cpa.g.sc125.16 Carica papaya HOM05D007963 ORTHO05D009967 4.5e-11 71.6 61 63.9
A09p45130 Brassica napus HOM05D007963 ORTHO05D009967 7.7e-11 70.9 114 39.5
BraA09t39974Z Brassica rapa HOM05D007963 ORTHO05D009967 7.7e-11 70.9 114 39.5
BcaB01g00449 Brassica carinata HOM05D007963 ORTHO05D009967 1.3e-10 70.1 99 39.4
C08p27320 Brassica napus HOM05D007963 ORTHO05D009967 1.3e-10 70.1 99 39.4
SEGI_13442 Sequoiadendron giganteum HOM05D007963 ORTHO05D009967 1.7e-10 69.7 45 71.1
SEGI_37070 Sequoiadendron giganteum HOM05D007963 ORTHO05D009967 1.7e-10 69.7 45 71.1
BolC8t50349H Brassica oleracea HOM05D007963 ORTHO05D009967 6.5e-10 67.8 99 38.4
BcaC02g09285 Brassica carinata HOM05D007963 ORTHO05D009967 1.1e-09 67.0 111 39.6
BcaNung06964 Brassica carinata HOM05D007963 ORTHO05D009967 1.1e-09 67.0 99 38.4
AL5G32620 Arabidopsis lyrata HOM05D007963 ORTHO05D009967 2.5e-09 65.9 116 36.2
AT3G52070 Arabidopsis thaliana HOM05D007963 ORTHO05D009967 3.2e-09 65.5 117 35.9
BcaNung06087 Brassica carinata HOM05D007963 ORTHO05D009967 4.2e-09 65.1 57 56.1
ATR0332G088 Amborella trichopoda HOM05D007963 ORTHO05D009967 1.2e-08 63.5 42 69.0
A04p07310 Brassica napus HOM05D007963 ORTHO05D009967 1.6e-08 63.2 111 37.8
BraA04t16426Z Brassica rapa HOM05D007963 ORTHO05D009967 1.6e-08 63.2 111 37.8
BcaB02g08592 Brassica carinata HOM05D007963 ORTHO05D009967 3.6e-08 62.0 111 37.8
C04p40920 Brassica napus HOM05D007963 ORTHO05D009967 2.3e-07 59.3 106 37.7
Aa31LG10G7140 Aethionema arabicum HOM05D007963 ORTHO05D009967 6.7e-07 57.8 112 33.9


User provided reference genes

Program Settings