Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 5.3e-44 180.6 91 100.0
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 1.1e-38 162.9 91 91.2
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 1.5e-35 152.5 88 87.5
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 4.6e-32 141.0 88 77.3
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 4.6e-32 141.0 88 77.3
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 4.6e-32 141.0 88 77.3
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 7.9e-32 140.2 89 75.3
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 7.9e-32 140.2 88 78.4
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 8.7e-31 136.7 86 77.9
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 4.3e-30 134.4 88 78.4
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 5.6e-30 134.0 87 74.7
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 7.4e-30 133.7 88 76.1
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 7.4e-30 133.7 88 73.9
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 7.4e-30 133.7 88 72.7
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 9.6e-30 133.3 87 75.9
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 9.6e-30 133.3 88 75.0
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 1.3e-29 132.9 88 76.1
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 1.3e-29 132.9 87 75.9
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 1.6e-29 132.5 88 73.9
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 2.1e-29 132.1 88 73.9
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 2.1e-29 132.1 88 76.1
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 2.1e-29 132.1 88 75.0
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 2.8e-29 131.7 88 77.3
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 2.8e-29 131.7 88 77.3
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 1.1e-28 129.8 88 75.0
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 1.4e-28 129.4 88 72.7
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 1.4e-28 129.4 88 70.5
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 1.8e-28 129.0 88 72.7
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 1.8e-28 129.0 88 72.7
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 3.1e-28 128.3 89 69.7
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 3.1e-28 128.3 90 71.1
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 4.0e-28 127.9 88 70.5
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 4.0e-28 127.9 91 70.3
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 5.3e-28 127.5 83 73.5
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 5.3e-28 127.5 83 73.5
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 6.9e-28 127.1 88 72.7
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 9.0e-28 126.7 88 69.3
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 9.0e-28 126.7 88 71.6
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 1.2e-27 126.3 88 70.5
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 1.2e-27 126.3 88 71.6
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 3.4e-27 124.8 88 70.5
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 4.5e-27 124.4 89 70.8
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 5.8e-27 124.0 90 73.3
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 1.0e-26 123.2 87 69.0
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 1.3e-26 122.9 88 71.6
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 1.3e-26 122.9 89 69.7
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 2.2e-26 122.1 80 75.0
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 2.2e-26 122.1 89 69.7
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 2.2e-26 122.1 77 77.9
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 2.9e-26 121.7 84 73.8
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 2.9e-26 121.7 87 71.3
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 2.9e-26 121.7 88 68.2
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 3.8e-26 121.3 77 79.2
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 3.8e-26 121.3 87 71.3
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 3.8e-26 121.3 87 65.5
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 6.5e-26 120.6 88 71.6
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 1.1e-25 119.8 77 75.3
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 1.1e-25 119.8 88 68.2
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 1.4e-25 119.4 84 72.6
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 2.5e-25 118.6 88 69.3
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 2.5e-25 118.6 86 68.6
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 3.2e-25 118.2 86 67.4
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 4.2e-25 117.9 88 69.3
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 5.5e-25 117.5 90 66.7
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 5.5e-25 117.5 88 67.0
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 9.3e-25 116.7 88 65.9
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 1.6e-24 115.9 87 66.7
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 2.1e-24 115.5 104 63.5
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 4.6e-24 114.4 88 64.8
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 7.9e-24 113.6 90 64.4
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 7.9e-24 113.6 90 64.4
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 7.9e-24 113.6 90 64.4
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 1.0e-23 113.2 90 64.4
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 1.3e-23 112.8 90 64.4
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 1.3e-23 112.8 90 64.4
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 2.3e-23 112.1 90 64.4
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 3.0e-23 111.7 90 64.4
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 3.9e-23 111.3 77 71.4
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 8.7e-23 110.2 90 64.4
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 8.7e-23 110.2 90 64.4
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 1.1e-22 109.8 90 64.4
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 1.9e-22 109.0 125 52.8
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 1.9e-22 109.0 123 51.2
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 3.3e-22 108.2 90 63.3
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 3.3e-22 108.2 94 64.9
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 4.3e-22 107.8 81 66.7
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 7.4e-22 107.1 95 64.2
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 9.7e-22 106.7 90 63.3
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 3.7e-21 104.8 90 61.1
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 6.3e-21 104.0 90 61.1
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 6.3e-21 104.0 91 62.6
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 8.2e-21 103.6 114 53.5
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 1.5e-19 99.4 142 43.7
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 1.5e-19 99.4 142 43.7
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 4.5e-19 97.8 71 67.6
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 3.2e-17 91.7 81 63.0
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 4.2e-17 91.3 86 58.1
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 2.1e-16 89.0 90 53.3
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 7.9e-16 87.0 88 59.1
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 5.1e-15 84.3 59 66.1
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 5.1e-15 84.3 65 61.5
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 6.7e-15 84.0 196 33.2
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 6.7e-15 84.0 85 55.3
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 7.4e-14 80.5 48 77.1
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 3.7e-13 78.2 48 75.0
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 1.1e-12 76.6 48 79.2
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 1.4e-12 76.3 49 75.5
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 5.3e-12 74.3 48 75.0
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 2.0e-11 72.4 58 60.3
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 9.4e-09 63.5 41 75.6
Cc00_g26940 Coffea canephora HOM05D007133 ORTHO05D008954 5.1e-07 57.8 54 59.3


User provided reference genes

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