Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G043600 Populus trichocarpa HOM05D005811 ORTHO05D007070 4.0e-28 127.9 91 100.0
Sabra09G0031000 Salix brachista HOM05D005811 ORTHO05D007070 4.6e-24 114.4 91 70.3
Potri.001G249600 Populus trichocarpa HOM05D005811 ORTHO05D007070 1.3e-21 106.3 94 66.0
Sabra16G0151600 Salix brachista HOM05D005811 ORTHO05D007070 3.7e-21 104.8 94 64.9
Manes.01G163700 Manihot esculenta HOM05D005811 ORTHO05D007070 5.3e-20 100.9 95 71.6
Manes.02G121312 Manihot esculenta HOM05D005811 ORTHO05D007070 9.0e-20 100.1 96 60.4
Nn2g13640 Nelumbo nucifera HOM05D005811 ORTHO05D007070 2.0e-19 99.0 92 64.1
Duzib150G1392 Durio zibethinus HOM05D005811 ORTHO05D007070 1.0e-18 96.7 91 61.5
Cpa.g.sc112.49 Carica papaya HOM05D005811 ORTHO05D007070 2.9e-18 95.1 92 59.8
Duzib170G0110 Durio zibethinus HOM05D005811 ORTHO05D007070 3.8e-18 94.7 92 60.9
Nn2g11406 Nelumbo nucifera HOM05D005811 ORTHO05D007070 1.9e-17 92.4 92 60.9
Glyma.18G065900 Glycine max HOM05D005811 ORTHO05D007070 4.2e-17 91.3 91 58.2
Duzib168G1366 Durio zibethinus HOM05D005811 ORTHO05D007070 5.5e-17 90.9 93 59.1
THA.LOC104799405 Tarenaya hassleriana HOM05D005811 ORTHO05D007070 9.3e-17 90.1 94 56.4
Thecc.09G304900 Theobroma cacao HOM05D005811 ORTHO05D007070 9.3e-17 90.1 92 58.7
arahy.Tifrunner.gnm1.ann1.8DRC0W Arachis hypogaea HOM05D005811 ORTHO05D007070 1.2e-16 89.7 92 77.2
arahy.Tifrunner.gnm1.ann1.AMG8UC Arachis hypogaea HOM05D005811 ORTHO05D007070 1.2e-16 89.7 92 77.2
Gohir.A03G049700 Gossypium hirsutum HOM05D005811 ORTHO05D007070 1.6e-16 89.4 91 54.9
PGR102G1689 Punica granatum HOM05D005811 ORTHO05D007070 1.6e-16 89.4 94 57.4
Sc06g0008440 Simmondsia chinensis HOM05D005811 ORTHO05D007070 1.6e-16 89.4 92 57.6
Ciclev10029657m.g Citrus clementina HOM05D005811 ORTHO05D007070 2.7e-16 88.6 61 77.0
QL01p037422 Quercus lobata HOM05D005811 ORTHO05D007070 2.7e-16 88.6 91 79.1
Prupe.6G060300 Prunus persica HOM05D005811 ORTHO05D007070 3.6e-16 88.2 97 58.8
Gohir.D03G117600 Gossypium hirsutum HOM05D005811 ORTHO05D007070 4.6e-16 87.8 91 53.8
Gorai.003G124000 Gossypium raimondii HOM05D005811 ORTHO05D007070 4.6e-16 87.8 91 53.8
TWI75G0861 Tripterygium wilfordii HOM05D005811 ORTHO05D007070 1.8e-15 85.9 91 58.2
ATR0618G101 Amborella trichopoda HOM05D005811 ORTHO05D007070 5.1e-15 84.3 91 56.0
Phvul.006G065100 Phaseolus vulgaris HOM05D005811 ORTHO05D007070 5.1e-15 84.3 91 61.5
TPR.G13272 Trifolium pratense HOM05D005811 ORTHO05D007070 5.1e-15 84.3 95 53.7
TAR369G0215 Trochodendron aralioides HOM05D005811 ORTHO05D007070 5.1e-15 84.3 92 55.4
VMungo0540G1301 Vigna mungo HOM05D005811 ORTHO05D007070 6.7e-15 84.0 91 56.0
CiPaw.14G060800 Carya illinoinensis HOM05D005811 ORTHO05D007070 8.8e-15 83.6 96 67.7
MD03G1073700 Malus domestica HOM05D005811 ORTHO05D007070 1.1e-14 83.2 97 55.7
CiPaw.13G080400 Carya illinoinensis HOM05D005811 ORTHO05D007070 1.5e-14 82.8 96 56.2
Lj6g0027141 Lotus japonicus HOM05D005811 ORTHO05D007070 2.5e-14 82.0 91 53.8
Ca_05589_v3 Cicer arietinum L. HOM05D005811 ORTHO05D007070 3.3e-14 81.6 90 55.6
Gohir.A05G089600 Gossypium hirsutum HOM05D005811 ORTHO05D007070 4.3e-14 81.3 96 53.1
Gohir.D05G090500 Gossypium hirsutum HOM05D005811 ORTHO05D007070 4.3e-14 81.3 61 72.1
Gorai.009G093000 Gossypium raimondii HOM05D005811 ORTHO05D007070 4.3e-14 81.3 61 72.1
MBI14_g04429_MAGBIO Magnolia biondii HOM05D005811 ORTHO05D007070 4.3e-14 81.3 92 56.5
Haze_24267 Corylus avellana HOM05D005811 ORTHO05D007070 5.7e-14 80.9 97 53.6
Cfa011662 Carpinus fangiana HOM05D005811 ORTHO05D007070 7.4e-14 80.5 95 53.7
Actinidia34450 Actinidia chinensis HOM05D000731 ORTHO05D003068 9.7e-14 80.1 94 59.6
MBI06_g39483_MAGBIO Magnolia biondii HOM05D005811 ORTHO05D007070 2.2e-13 79.0 92 55.4
MBI06_g42850_MAGBIO Magnolia biondii HOM05D005811 ORTHO05D007070 2.2e-13 79.0 92 55.4
CsaV3_6G016350 Cucumis sativus L. HOM05D005811 ORTHO05D007070 2.8e-13 78.6 99 51.5
Aqoxy2G00950 Aquilegia oxysepala HOM05D005811 ORTHO05D007070 3.7e-13 78.2 93 75.3
LjContig00155g0018843 Lotus japonicus HOM05D005811 ORTHO05D007070 3.7e-13 78.2 90 58.9
MD11G1079700 Malus domestica HOM05D005811 ORTHO05D007070 3.7e-13 78.2 97 52.6
Glyma.11G176000 Glycine max HOM05D005811 ORTHO05D007070 8.2e-13 77.0 92 65.2
Sed0022374 Sechium edule HOM05D005811 ORTHO05D007070 1.4e-12 76.3 97 49.5
CANSAT54G2446 Cannabis sativa HOM05D005811 ORTHO05D007070 1.8e-12 75.9 97 50.5
MELO3C025865.2 Cucumis melo HOM05D005811 ORTHO05D007070 2.4e-12 75.5 98 51.0
MSTRG.18574 Avicennia marina HOM05D005811 ORTHO05D007070 4.1e-12 74.7 99 50.5
Dinv28620 Davidia involucrata HOM05D005811 ORTHO05D007070 4.1e-12 74.7 63 69.8
Medtr3g462990 Medicago truncatula HOM05D005811 ORTHO05D007070 4.1e-12 74.7 80 78.8
Psat2g059240 Pisum sativum HOM05D005811 ORTHO05D007070 4.1e-12 74.7 60 66.7
Ah.15g099770 Amaranthus hybridus HOM05D005811 ORTHO05D007070 5.3e-12 74.3 103 49.5
Dinv14462 Davidia involucrata HOM05D005811 ORTHO05D007070 5.3e-12 74.3 62 69.4
Nitab4.5_0000010g0190 Nicotiana tabacum HOM05D005811 ORTHO05D007070 5.3e-12 74.3 78 56.4
Hund04884 Selenicereus undatus HOM05D004319 ORTHO05D007070 5.3e-12 74.3 82 51.2
Thhalv10010831m.g Eutrema salsugineum HOM05D005811 ORTHO05D007070 6.9e-12 73.9 60 66.7
Sp5g14660 Schrenkiella parvula HOM05D005811 ORTHO05D007070 6.9e-12 73.9 60 66.7
AUR62020102 Chenopodium quinoa HOM05D005811 ORTHO05D007070 9.1e-12 73.6 103 45.6
ClCG02G019670 Citrullus lanatus HOM05D005811 ORTHO05D007070 9.1e-12 73.6 99 49.5
vmacro02985 Vaccinium macrocarpon HOM05D005811 ORTHO05D007070 9.1e-12 73.6 94 73.4
AUR62001678 Chenopodium quinoa HOM05D005811 ORTHO05D007070 1.2e-11 73.2 103 45.6
A06p20460 Brassica napus HOM05D005811 ORTHO05D007070 1.5e-11 72.8 59 66.1
C03p71300 Brassica napus HOM05D005811 ORTHO05D007070 1.5e-11 72.8 59 66.1
BolC3t19415H Brassica oleracea HOM05D005811 ORTHO05D007070 1.5e-11 72.8 59 66.1
BraA06t25121Z Brassica rapa HOM05D005811 ORTHO05D007070 1.5e-11 72.8 59 66.1
Nn1g05379 Nelumbo nucifera HOM05D005811 ORTHO05D007070 2.0e-11 72.4 60 66.7
Rhsim13G0071700 Rhododendron simsii HOM05D005811 ORTHO05D007070 2.0e-11 72.4 93 71.0
BcaB01g00949 Brassica carinata HOM05D005811 ORTHO05D007070 4.5e-11 71.2 59 64.4
Nitab4.5_0004144g0020 Nicotiana tabacum HOM05D005811 ORTHO05D007070 4.5e-11 71.2 78 55.1
A06p27110 Brassica napus HOM05D005811 ORTHO05D007070 5.9e-11 70.9 60 63.3
BraA06t25647Z Brassica rapa HOM05D005811 ORTHO05D007070 5.9e-11 70.9 60 63.3
BcaC01g01857 Brassica carinata HOM05D005811 ORTHO05D007070 7.7e-11 70.5 59 64.4
BcaC01g01858 Brassica carinata HOM05D005811 ORTHO05D007070 7.7e-11 70.5 59 64.4
CARHR272810 Cardamine hirsuta HOM05D005811 ORTHO05D007070 7.7e-11 70.5 98 42.9
HPP92_012634 Vanilla planifolia HOM05D005811 ORTHO05D007070 7.7e-11 70.5 101 47.5
Aa31LG4G15980 Aethionema arabicum HOM05D005811 ORTHO05D007070 1.0e-10 70.1 104 45.2
Lalb_Chr04g0252321 Lupinus albus HOM05D005811 ORTHO05D007070 1.0e-10 70.1 83 49.4
MBI05_g30574_MAGBIO Magnolia biondii HOM05D000339 ORTHO05D000212 1.3e-10 69.7 82 80.5
Nn4g22044 Nelumbo nucifera HOM05D005811 ORTHO05D007070 1.3e-10 69.7 60 65.0
BcaC01g02249 Brassica carinata HOM05D005811 ORTHO05D007070 1.7e-10 69.3 60 61.7
BolC3t19011H Brassica oleracea HOM05D005811 ORTHO05D007070 1.7e-10 69.3 60 61.7
Sed0014350 Sechium edule HOM05D005811 ORTHO05D007070 1.7e-10 69.3 92 47.8
Solyc06g076790.1 Solanum lycopersicum HOM05D005811 ORTHO05D007070 1.7e-10 69.3 86 53.5
BNapus_Darmor_BZH_scaffold_82p00020 Brassica napus HOM05D005811 ORTHO05D007070 2.9e-10 68.6 60 61.7
Medtr5g069990 Medicago truncatula HOM05D005811 ORTHO05D007070 2.9e-10 68.6 64 59.4
Carub.0005s1331 Capsella rubella HOM05D005811 ORTHO05D007070 3.8e-10 68.2 60 61.7
Thhalv10015099m.g Eutrema salsugineum HOM05D005811 ORTHO05D007070 3.8e-10 68.2 101 42.6
FvH4_3g38260 Fragaria vesca HOM05D005811 ORTHO05D007070 3.8e-10 68.2 94 63.8
FAN11G0366 Fragaria x ananassa HOM05D005811 ORTHO05D007070 3.8e-10 68.2 94 63.8
Sopen06g033180 Solanum pennellii HOM05D005811 ORTHO05D007070 3.8e-10 68.2 86 76.7
AL5G26310 Arabidopsis lyrata HOM05D005811 ORTHO05D007070 5.0e-10 67.8 60 60.0
BcaB02g10703 Brassica carinata HOM05D005811 ORTHO05D007070 5.0e-10 67.8 60 61.7
Lalb_Chr04g0252281 Lupinus albus HOM05D005811 ORTHO05D007070 5.0e-10 67.8 83 50.6
Nn3g20363 Nelumbo nucifera HOM05D005811 ORTHO05D007070 5.0e-10 67.8 60 65.0
EL10Ac7g16131 Beta vulgaris HOM05D005811 ORTHO05D007070 6.5e-10 67.4 61 59.0
BcaC04g19852 Brassica carinata HOM05D005811 ORTHO05D007070 8.5e-10 67.0 99 41.4
BcaC04g19853 Brassica carinata HOM05D005811 ORTHO05D007070 8.5e-10 67.0 99 41.4
A10p15470 Brassica napus HOM05D005811 ORTHO05D007070 8.5e-10 67.0 99 41.4
C09p51020 Brassica napus HOM05D005811 ORTHO05D007070 8.5e-10 67.0 99 41.4
BolC9t57959H Brassica oleracea HOM05D005811 ORTHO05D007070 8.5e-10 67.0 99 41.4
BraA10t43688Z Brassica rapa HOM05D005811 ORTHO05D007070 8.5e-10 67.0 99 41.4
CAN.G394.109 Capsicum annuum HOM05D005811 ORTHO05D007070 8.5e-10 67.0 81 50.6
FAN16G2097 Fragaria x ananassa HOM05D005811 ORTHO05D007070 1.1e-09 66.6 94 62.8
Hma1.2p1_1010F.1_g247360 Hydrangea macrophylla HOM05D005811 ORTHO05D007070 1.1e-09 66.6 96 65.6
FAN21G0983 Fragaria x ananassa HOM05D005811 ORTHO05D007070 1.4e-09 66.2 94 61.7
unitig_899.g15251 Utricularia gibba HOM05D005811 ORTHO05D007070 1.4e-09 66.2 99 68.7
Nitab4.5_0000102g0070 Nicotiana tabacum HOM05D005811 ORTHO05D007070 1.9e-09 65.9 96 45.8
Sp6g20560 Schrenkiella parvula HOM05D005811 ORTHO05D007070 1.9e-09 65.9 99 41.4
TPR.G24035 Trifolium pratense HOM05D005811 ORTHO05D007070 2.5e-09 65.5 99 61.6
AT3G47070 Arabidopsis thaliana HOM05D005811 ORTHO05D007070 3.2e-09 65.1 60 55.0
FAN25G1329 Fragaria x ananassa HOM05D005811 ORTHO05D007070 3.2e-09 65.1 94 61.7
RcHm_v2.0_Chr5g0068741 Rosa chinensis HOM05D005811 ORTHO05D007070 7.2e-09 63.9 94 45.7
Ca_14913_v3 Cicer arietinum L. HOM05D005811 ORTHO05D007070 1.6e-08 62.8 95 65.3
Carub.0008s1950 Capsella rubella HOM05D005811 ORTHO05D007070 2.1e-08 62.4 56 57.1
GSVIVG01024785001 Vitis vinifera HOM05D005811 ORTHO05D007070 2.1e-08 62.4 89 70.8
DCAR_018965 Daucus carota HOM05D005811 ORTHO05D007070 2.7e-08 62.0 85 50.6
SGA_v2.0_scaffold443G51693 Striga asiatica HOM05D005811 ORTHO05D007070 2.7e-08 62.0 39 74.4
Lalb_Chr10g0103291 Lupinus albus HOM05D005811 ORTHO05D007070 3.6e-08 61.6 93 72.0
PGSC0003DMG400004165 Solanum tuberosum HOM05D005811 ORTHO05D007070 1.8e-07 59.3 78 44.9
CDE02G0229 Ceratophyllum demersum HOM05D005811 ORTHO05D007070 2.3e-07 58.9 39 69.2
Peaxi162Scf01058g00001 Petunia axillaris HOM05D005811 ORTHO05D007070 3.0e-07 58.5 67 52.2
unitig_746.g26735 Utricularia gibba HOM05D005811 ORTHO05D007070 6.7e-07 57.4 65 50.8
PGSC0003DMG400030440 Solanum tuberosum HOM05D005811 ORTHO05D007070 1.5e-06 56.2 68 48.5
Lsat_1_v5_gn_8_71220 Lactuca sativa HOM05D005811 ORTHO05D007070 2.6e-06 55.5 78 62.8
CAN.G780.4 Capsicum annuum HOM05D005811 ORTHO05D007070 5.7e-06 54.3 69 71.0
COL.COLO4_19113 Corchorus olitorius HOM05D005811 ORTHO05D007070 9.7e-06 53.5 89 65.2


User provided reference genes

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