Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G043501 Populus trichocarpa HOM05D004233 ORTHO05D003507 3.6e-61 238.0 119 100.0
Potri.001G249500 Populus trichocarpa HOM05D004233 ORTHO05D003507 3.1e-36 155.2 120 70.0
Sabra09G0030900 Salix brachista HOM05D004233 ORTHO05D003507 1.6e-24 116.3 64 90.6
Ciclev10029412m.g Citrus clementina HOM05D004233 ORTHO05D003507 2.0e-19 99.4 94 62.8
Hma1.2p1_0227F.1_g096330 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 2.0e-19 99.4 124 53.2
Duzib150G0257 Durio zibethinus HOM05D004233 ORTHO05D003507 2.9e-18 95.5 120 52.5
Gorai.001G115000 Gossypium raimondii HOM05D004233 ORTHO05D003507 1.2e-16 90.1 124 50.0
Gohir.D07G106900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.1e-16 89.4 124 49.2
Gohir.A07G102900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.6e-16 88.6 124 50.0
Cc01_g13980 Coffea canephora HOM05D004233 ORTHO05D003507 1.4e-15 86.7 81 59.3
Actinidia25149 Actinidia chinensis HOM05D004233 ORTHO05D003507 2.3e-15 85.9 112 52.7
Manes.02G121400 Manihot esculenta HOM05D004233 ORTHO05D003507 3.0e-15 85.5 125 47.2
TAR369G1066 Trochodendron aralioides HOM05D004233 ORTHO05D003507 8.8e-15 84.0 84 60.7
TWI79G1354 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 1.1e-14 83.6 117 49.6
Haze_24266 Corylus avellana HOM05D004233 ORTHO05D003507 2.0e-14 82.8 90 56.7
Nn2g13635 Nelumbo nucifera HOM05D004233 ORTHO05D003507 1.3e-13 80.1 97 54.6
Gohir.A03G049600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.7e-13 79.7 118 45.8
Rhsim13G0071800 Rhododendron simsii HOM05D004233 ORTHO05D003507 3.7e-13 78.6 126 46.0
Gorai.003G124100 Gossypium raimondii HOM05D004233 ORTHO05D003507 4.8e-13 78.2 109 47.7
Gohir.D03G117700 Gossypium hirsutum HOM05D004233 ORTHO05D003507 6.3e-13 77.8 109 47.7
Gohir.A05G089700 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.1e-12 77.0 90 55.6
Gohir.D05G090600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.1e-12 77.0 90 55.6
Gorai.009G093100 Gossypium raimondii HOM05D004233 ORTHO05D003507 1.1e-12 77.0 90 55.6
TAR623G0525 Trochodendron aralioides HOM05D004233 ORTHO05D003507 1.4e-12 76.6 86 60.5
Phvul.006G065200 Phaseolus vulgaris HOM05D010371 ORTHO05D003507 2.4e-12 75.9 95 48.4
CiPaw.14G060900 Carya illinoinensis HOM05D004233 ORTHO05D003507 9.1e-12 73.9 94 53.2
Peaxi162Scf00056g00201 Petunia axillaris HOM05D004233 ORTHO05D003507 9.1e-12 73.9 117 44.4
MBI05_g30571_MAGBIO Magnolia biondii HOM05D004233 ORTHO05D003507 1.5e-11 73.2 97 49.5
QL01p037420 Quercus lobata HOM05D004233 ORTHO05D003507 1.5e-11 73.2 103 52.4
Glyma.18G065800 Glycine max HOM05D010371 ORTHO05D003507 2.0e-11 72.8 87 50.6
CiPaw.13G080500 Carya illinoinensis HOM05D004233 ORTHO05D003507 3.4e-11 72.0 96 51.0
MBI06_g42853_MAGBIO Magnolia biondii HOM05D004233 ORTHO05D003507 7.7e-11 70.9 98 49.0
Nn1g02891 Nelumbo nucifera HOM05D004233 ORTHO05D003507 7.7e-11 70.9 99 50.5
Thhalv10009101m.g Eutrema salsugineum HOM05D005325 ORTHO05D003507 1.0e-10 70.5 90 48.9
BraA09t41987Z Brassica rapa HOM05D005325 ORTHO05D003507 2.2e-10 69.3 100 47.0
VMungo0540G0421 Vigna mungo HOM05D010371 ORTHO05D003507 2.2e-10 69.3 87 48.3
Glyma.11G176100 Glycine max HOM05D010371 ORTHO05D003507 2.9e-10 68.9 86 48.8
BcaC07g42009 Brassica carinata HOM05D005325 ORTHO05D003507 6.5e-10 67.8 102 44.1
Hma1.2p1_0763F.1_g214800 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 6.5e-10 67.8 113 48.7
AL1G17450 Arabidopsis lyrata HOM05D005325 ORTHO05D003507 8.5e-10 67.4 89 51.7
C08p50660 Brassica napus HOM05D005325 ORTHO05D003507 8.5e-10 67.4 101 44.6
BolC8t52594H Brassica oleracea HOM05D005325 ORTHO05D003507 8.5e-10 67.4 101 44.6
Prupe.6G271900 Prunus persica HOM05D004233 ORTHO05D003507 8.5e-10 67.4 115 43.5
CARHR007020 Cardamine hirsuta HOM05D005325 ORTHO05D003507 1.1e-09 67.0 90 46.7
Gohir.A09G163800 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.1e-09 67.0 82 54.9
Gohir.D09G159300 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.1e-09 67.0 82 54.9
Gorai.006G181000 Gossypium raimondii HOM05D004233 ORTHO05D003507 1.1e-09 67.0 82 54.9
PGSC0003DMG400004152 Solanum tuberosum HOM05D004233 ORTHO05D003507 1.1e-09 67.0 89 49.4
Nitab4.5_0000102g0150 Nicotiana tabacum HOM05D004233 ORTHO05D003507 1.4e-09 66.6 119 44.5
AT1G07300 Arabidopsis thaliana HOM05D005325 ORTHO05D003507 2.5e-09 65.9 89 50.6
Migut.N00891 Erythranthe guttata HOM05D004233 ORTHO05D003507 4.2e-09 65.1 90 51.1
QL07p036016 Quercus lobata HOM05D004233 ORTHO05D003507 5.5e-09 64.7 81 56.8
Sp1g06050 Schrenkiella parvula HOM05D005325 ORTHO05D003507 5.5e-09 64.7 99 45.5
A10p05870 Brassica napus HOM05D005325 ORTHO05D003507 7.2e-09 64.3 97 48.5
Cfa017246 Carpinus fangiana HOM05D004233 ORTHO05D003507 7.2e-09 64.3 101 52.5
Dinv37074 Davidia involucrata HOM05D004233 ORTHO05D003507 7.2e-09 64.3 84 52.4
Rhsim04G0131700 Rhododendron simsii HOM05D004233 ORTHO05D003507 7.2e-09 64.3 87 52.9
TWI77G0758 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 7.2e-09 64.3 101 47.5
CAN.G780.3 Capsicum annuum HOM05D004233 ORTHO05D003507 9.4e-09 63.9 90 47.8
Oeu045519.1 Olea europaea HOM05D004233 ORTHO05D003507 1.2e-08 63.5 83 49.4
Potri.016G112700 Populus trichocarpa HOM05D004233 ORTHO05D003507 1.2e-08 63.5 84 51.2
DCAR_007388 Daucus carota HOM05D004233 ORTHO05D003507 1.6e-08 63.2 82 48.8
Aa31LG5G6840 Aethionema arabicum HOM05D005325 ORTHO05D003507 2.1e-08 62.8 93 46.2
BraA10t42849Z Brassica rapa HOM05D005325 ORTHO05D003507 2.1e-08 62.8 98 46.9
CANSAT54G0898 Cannabis sativa HOM05D004233 ORTHO05D003507 2.1e-08 62.8 80 48.8
Duzib106G0630 Durio zibethinus HOM05D004233 ORTHO05D003507 2.1e-08 62.8 82 51.2
RcHm_v2.0_Chr3g0463681 Rosa chinensis HOM05D004233 ORTHO05D003507 2.1e-08 62.8 97 45.4
Aqoxy4G02651 Aquilegia oxysepala HOM05D004233 ORTHO05D003507 2.7e-08 62.4 82 52.4
FAN09G0897 Fragaria x ananassa HOM05D004233 ORTHO05D003507 2.7e-08 62.4 97 45.4
Sp4g12360 Schrenkiella parvula HOM05D005325 ORTHO05D003507 2.7e-08 62.4 107 42.1
Solyc06g006090.1 Solanum lycopersicum HOM05D004233 ORTHO05D003507 2.7e-08 62.4 89 48.3
Ciclev10013109m.g Citrus clementina HOM05D004233 ORTHO05D003507 3.6e-08 62.0 83 49.4
Duzib093G0978 Durio zibethinus HOM05D004233 ORTHO05D003507 3.6e-08 62.0 82 54.9
Atru.chr8.2208 Acer truncatum HOM05D004233 ORTHO05D003507 6.1e-08 61.2 85 51.8
COL.COLO4_14571 Corchorus olitorius HOM05D004233 ORTHO05D003507 6.1e-08 61.2 100 49.0
Sabra16G0108400 Salix brachista HOM05D004233 ORTHO05D003507 6.1e-08 61.2 84 50.0
Duzib128G0556 Durio zibethinus HOM05D004233 ORTHO05D003507 7.9e-08 60.8 82 53.7
FvH4_6g11920 Fragaria vesca HOM05D004233 ORTHO05D003507 7.9e-08 60.8 97 44.3
FAN02G0664 Fragaria x ananassa HOM05D004233 ORTHO05D003507 7.9e-08 60.8 97 44.3
FAN14G3430 Fragaria x ananassa HOM05D004233 ORTHO05D003507 7.9e-08 60.8 97 44.3
FAN14G4547 Fragaria x ananassa HOM05D004233 ORTHO05D003507 7.9e-08 60.8 97 44.3
A05p15750 Brassica napus HOM05D005325 ORTHO05D008457 1.0e-07 60.5 100 46.0
C05p05370 Brassica napus HOM05D005325 ORTHO05D003507 1.0e-07 60.5 98 43.9
Gohir.D01G215600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.0e-07 60.5 81 53.1
Gorai.002G261800 Gossypium raimondii HOM05D004233 ORTHO05D003507 1.0e-07 60.5 81 53.1
Thecc.05G020400 Theobroma cacao HOM05D004233 ORTHO05D003507 1.0e-07 60.5 85 51.8
FAN05G3657 Fragaria x ananassa HOM05D004233 ORTHO05D003507 1.4e-07 60.1 97 43.3
Sopen06g002040 Solanum pennellii HOM05D004233 ORTHO05D003507 1.4e-07 60.1 89 47.2
Aa31LG1G6560 Aethionema arabicum HOM05D005325 ORTHO05D003507 1.8e-07 59.7 87 46.0
MSTRG.10228 Avicennia marina HOM05D004233 ORTHO05D003507 1.8e-07 59.7 126 38.9
Prupe.6G060400 Prunus persica HOM05D012510 ORTHO05D015115 1.8e-07 59.7 94 44.7
PGR004G1616 Punica granatum HOM05D004233 ORTHO05D003507 1.8e-07 59.7 99 46.5
BraA05t20490Z Brassica rapa HOM05D005325 ORTHO05D008457 2.3e-07 59.3 100 45.0
Carub.0001s0660 Capsella rubella HOM05D005325 ORTHO05D003507 2.3e-07 59.3 90 46.7
Gohir.A01G225900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.3e-07 59.3 81 51.9
SalBow2G0796 Salvia bowleyana HOM05D004233 ORTHO05D003507 2.3e-07 59.3 91 45.1
CiPaw.09G207200 Carya illinoinensis HOM05D004233 ORTHO05D003507 3.0e-07 58.9 83 55.4
Dinv26880 Davidia involucrata HOM05D004233 ORTHO05D003507 3.0e-07 58.9 66 59.1
Glyma.01G113100 Glycine max HOM05D004233 ORTHO05D003507 3.9e-07 58.5 82 48.8
Manes.09G103100 Manihot esculenta HOM05D004233 ORTHO05D003507 3.9e-07 58.5 84 48.8
Sopen06g033170 Solanum pennellii HOM05D034108 ORTHO05D003507 6.7e-07 57.8 86 46.5
BcaC07g42458 Brassica carinata HOM05D005325 ORTHO05D003507 8.8e-07 57.4 98 44.9
BolC5t29309H Brassica oleracea HOM05D005325 ORTHO05D003507 8.8e-07 57.4 98 44.9
Glyma.03G078400 Glycine max HOM05D004233 ORTHO05D003507 8.8e-07 57.4 82 48.8
Lsat_1_v5_gn_9_20140 Lactuca sativa HOM05D004233 ORTHO05D003507 8.8e-07 57.4 83 48.2
Medtr3g462980 Medicago truncatula HOM05D010371 ORTHO05D003507 8.8e-07 57.4 85 47.1
Phvul.010G005000 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 8.8e-07 57.4 83 48.2
VMungo1383G3137 Vigna mungo HOM05D004233 ORTHO05D003507 8.8e-07 57.4 89 47.2
Eucgr.K02995 Eucalyptus grandis HOM05D004233 ORTHO05D003507 1.1e-06 57.0 84 50.0
MD12G1161500 Malus domestica HOM05D004233 ORTHO05D003507 1.5e-06 56.6 101 43.6
Glyma.07G146500 Glycine max HOM05D004233 ORTHO05D003507 2.0e-06 56.2 88 46.6
Glyma.18G197700 Glycine max HOM05D004233 ORTHO05D003507 2.0e-06 56.2 88 47.7
Phvul.008G106800 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 2.0e-06 56.2 87 48.3
SalBow4G0303 Salvia bowleyana HOM05D004233 ORTHO05D003507 2.0e-06 56.2 87 48.3
A04p22570 Brassica napus HOM05D005325 ORTHO05D008457 2.6e-06 55.8 95 43.2
Potri.006G097700 Populus trichocarpa HOM05D004233 ORTHO05D003507 2.6e-06 55.8 96 44.8
VMungo0331G0885 Vigna mungo HOM05D004233 ORTHO05D003507 2.6e-06 55.8 82 46.3
PGSC0003DMG400030486 Solanum tuberosum HOM05D034108 ORTHO05D003507 3.3e-06 55.5 85 45.9
Medtr2g013470 Medicago truncatula HOM05D004233 ORTHO05D003507 4.4e-06 55.1 81 46.9
Oeu024626.1 Olea europaea HOM05D004233 ORTHO05D003507 7.4e-06 54.3 97 42.3
Sabra06G0075200 Salix brachista HOM05D004233 ORTHO05D003507 7.4e-06 54.3 83 49.4
Lj6g0009965 Lotus japonicus HOM05D004233 ORTHO05D003507 9.7e-06 53.9 72 48.6
Psat2g059280 Pisum sativum HOM05D010371 ORTHO05D003507 9.7e-06 53.9 95 40.0


User provided reference genes

Program Settings