Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.0e-235 819.7 406 100.0
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 6.7e-200 700.7 406 86.5
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 1.0e-195 686.8 406 84.7
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 2.7e-164 582.4 405 71.1
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 1.1e-160 570.5 406 70.9
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 5.2e-160 568.2 412 69.7
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 4.1e-157 558.5 406 70.0
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 5.4e-157 558.1 397 70.3
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 7.1e-157 557.8 396 70.5
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 1.6e-156 556.6 404 68.8
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 6.0e-156 554.7 404 70.0
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 7.8e-156 554.3 407 67.8
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 3.0e-155 552.4 412 68.4
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 6.6e-155 551.2 408 67.9
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 2.5e-154 549.3 408 67.9
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.6e-153 546.6 397 69.3
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 2.4e-152 542.7 406 69.2
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 2.6e-151 539.3 406 67.0
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 9.9e-151 537.3 406 68.5
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 8.4e-150 534.3 406 68.0
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.1e-149 533.9 401 68.1
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 1.2e-148 530.4 406 68.0
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 1.2e-148 530.4 393 69.7
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 1.7e-147 526.6 404 65.8
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 3.0e-147 525.8 411 65.0
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.7e-142 510.0 413 64.2
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 2.5e-138 496.1 418 61.0
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 1.1e-136 490.7 406 61.6
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 4.0e-136 488.8 407 63.6
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 9.0e-136 487.6 413 62.2
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 2.0e-135 486.5 410 62.4
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 2.6e-135 486.1 410 63.2
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 6.4e-134 481.5 431 58.7
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 6.4e-134 481.5 417 59.5
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 4.2e-133 478.8 409 61.1
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 1.6e-132 476.9 404 63.9
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 1.6e-132 476.9 415 59.3
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 1.6e-132 476.9 409 60.4
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 6.0e-132 474.9 417 58.5
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 1.8e-131 473.4 410 61.0
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 5.1e-131 471.9 409 61.4
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 6.7e-131 471.5 413 58.4
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 6.7e-131 471.5 410 59.5
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 2.5e-130 469.5 409 60.6
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 5.6e-130 468.4 410 61.0
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 1.3e-129 467.2 406 59.9
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 1.3e-129 467.2 404 60.4
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 4.8e-129 465.3 380 59.7
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 1.1e-128 464.2 408 61.3
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 1.4e-128 463.8 408 59.3
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 2.4e-128 463.0 380 60.3
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 5.3e-128 461.8 406 60.6
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 6.9e-128 461.5 432 57.6
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 9.0e-128 461.1 409 58.7
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 1.5e-127 460.3 410 58.3
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 3.8e-126 455.7 306 71.6
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 6.4e-126 454.9 419 57.8
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 8.4e-126 454.5 409 58.2
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 1.9e-125 453.4 409 58.2
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 2.4e-125 453.0 409 58.4
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 2.4e-125 453.0 412 59.5
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 2.4e-125 453.0 412 58.5
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 9.3e-125 451.1 411 56.0
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 1.2e-124 450.7 402 58.7
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 1.6e-124 450.3 369 61.8
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 2.7e-124 449.5 392 60.2
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 3.5e-124 449.1 414 59.4
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 1.0e-123 447.6 402 59.5
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 1.0e-123 447.6 288 74.0
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 1.0e-123 447.6 414 59.2
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 3.0e-123 446.0 380 59.2
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 8.7e-123 444.5 408 58.3
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 2.5e-122 443.0 402 59.0
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 2.5e-122 443.0 402 59.0
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 2.5e-122 443.0 402 59.0
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 7.4e-122 441.4 410 58.0
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 1.3e-121 440.7 402 58.2
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 3.7e-121 439.1 271 76.4
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 5.3e-120 435.3 424 55.7
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 7.6e-119 431.4 402 57.7
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 2.9e-118 429.5 408 57.1
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 1.9e-117 426.8 245 81.6
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.2e-116 424.1 333 65.5
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 2.7e-116 422.9 324 63.0
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 1.2e-111 407.5 406 53.9
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 4.5e-111 405.6 406 53.9
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 2.2e-110 403.3 250 75.2
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 8.5e-110 401.4 312 60.6
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 1.1e-109 401.0 401 53.6
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 2.5e-106 389.8 310 58.7
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 8.2e-105 384.8 393 51.1
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 1.5e-103 380.6 290 63.4
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 6.7e-99 365.2 406 50.5
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 8.2e-97 358.2 359 54.9
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 5.0e-94 349.0 215 76.3
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 1.7e-86 323.9 406 47.5
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 7.7e-79 298.5 406 45.1
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 2.4e-64 250.4 149 75.2
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 6.4e-57 225.7 308 39.3
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 4.3e-53 213.0 293 39.2
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 2.4e-48 197.2 153 62.7
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 2.4e-48 197.2 153 62.7
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 9.2e-48 195.3 177 54.8
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.6e-47 194.5 119 76.5
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 2.3e-46 190.7 223 50.2
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 3.9e-46 189.9 272 40.8
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 2.5e-45 187.2 296 38.2
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 6.6e-38 162.5 199 49.2
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 1.8e-35 154.5 158 51.9
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 5.8e-34 149.4 99 74.7
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 2.7e-31 140.6 117 59.0
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 6.4e-25 119.4 296 30.4
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 6.0e-23 112.8 308 29.2
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 3.4e-10 70.5 94 47.9
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 1.3e-09 68.6 92 47.8
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 8.4e-09 65.9 215 27.9


User provided reference genes

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