Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G024700 Populus trichocarpa HOM05D008109 ORTHO05D009894 4.1e-99 364.8 189 100.0
Potri.001G232200 Populus trichocarpa HOM05D008109 ORTHO05D009894 7.1e-51 204.5 190 65.3
Sabra16G0138900 Salix brachista HOM05D008109 ORTHO05D009894 8.1e-47 191.0 193 64.2
Ciclev10032944m.g Citrus clementina HOM05D008109 ORTHO05D009894 1.1e-16 90.9 190 41.1
Duzib235G0400 Durio zibethinus HOM05D008109 ORTHO05D009894 4.8e-15 85.5 182 39.6
THA.LOC104815879 Tarenaya hassleriana HOM05D011216 ORTHO05D009894 4.8e-15 85.5 187 38.0
Manes.10G153100 Manihot esculenta HOM05D011216 ORTHO05D009894 3.1e-14 82.8 195 36.4
Phvul.005G042700 Phaseolus vulgaris HOM05D008109 ORTHO05D009894 3.1e-14 82.8 177 37.9
CiPaw.13G000700 Carya illinoinensis HOM05D008109 ORTHO05D009894 5.3e-14 82.0 186 38.7
Nn2g15812 Nelumbo nucifera HOM05D008109 ORTHO05D009894 5.3e-14 82.0 190 37.4
TWI09G0246 Tripterygium wilfordii HOM05D008109 ORTHO05D009894 1.5e-13 80.5 189 37.0
Cfa010699 Carpinus fangiana HOM05D008109 ORTHO05D009894 2.0e-13 80.1 180 39.4
VMungo1080G1374 Vigna mungo HOM05D008109 ORTHO05D009894 2.6e-13 79.7 182 35.2
Haze_03277 Corylus avellana HOM05D008109 ORTHO05D009894 3.4e-13 79.3 179 38.5
Nn7g35907 Nelumbo nucifera HOM05D008109 ORTHO05D009894 3.4e-13 79.3 185 38.4
PGR031G1804 Punica granatum HOM05D008109 ORTHO05D009894 1.3e-12 77.4 189 37.0
Dinv43946 Davidia involucrata HOM05D008109 ORTHO05D009894 2.2e-12 76.6 188 36.7
Gorai.010G246800 Gossypium raimondii HOM05D008109 ORTHO05D009894 2.9e-12 76.3 186 37.6
Atru.chr11.2715 Acer truncatum HOM05D008109 ORTHO05D009894 3.8e-12 75.9 183 36.6
Duzib192G0509 Durio zibethinus HOM05D008109 ORTHO05D009894 3.8e-12 75.9 190 39.5
Thecc.06G002700 Theobroma cacao HOM05D008109 ORTHO05D009894 3.8e-12 75.9 181 38.1
Lalb_Chr25g0283751 Lupinus albus HOM05D008109 ORTHO05D009894 4.9e-12 75.5 172 36.0
TPR.G10815 Trifolium pratense HOM05D008109 ORTHO05D009894 4.9e-12 75.5 175 38.9
Hma1.2p1_0541F.1_g174770 Hydrangea macrophylla HOM05D008109 ORTHO05D009894 8.4e-12 74.7 190 35.3
Gohir.D06G219700 Gossypium hirsutum HOM05D008109 ORTHO05D009894 1.4e-11 73.9 186 37.1
Aqoxy1G00435 Aquilegia oxysepala HOM05D008109 ORTHO05D009894 5.5e-11 72.0 182 33.5
Medtr2g062280 Medicago truncatula HOM05D008109 ORTHO05D009894 7.1e-11 71.6 176 38.1
TAR623G1474 Trochodendron aralioides HOM05D008109 ORTHO05D009894 7.1e-11 71.6 242 31.8
vmacro22469 Vaccinium macrocarpon HOM05D008109 ORTHO05D009894 7.1e-11 71.6 186 33.9
Gohir.A05G110700 Gossypium hirsutum HOM05D008109 ORTHO05D009894 9.3e-11 71.2 178 38.2
Gohir.A06G202200 Gossypium hirsutum HOM05D008109 ORTHO05D009894 2.7e-10 69.7 184 36.4
Glyma.15G267600 Glycine max HOM05D008109 ORTHO05D009894 3.5e-10 69.3 71 46.5
Sp4g14290 Schrenkiella parvula HOM05D011216 ORTHO05D009894 7.9e-10 68.2 188 33.0
QL04p002011 Quercus lobata HOM05D008109 ORTHO05D009894 1.0e-09 67.8 178 38.2
MSTRG.28106 Avicennia marina HOM05D008109 ORTHO05D009894 5.1e-09 65.5 186 31.7
A05p13660 Brassica napus HOM05D011216 ORTHO05D009894 5.1e-09 65.5 173 32.4
BraA05t20304Z Brassica rapa HOM05D011216 ORTHO05D009894 5.1e-09 65.5 173 32.4
Glyma.08G158700 Glycine max HOM05D008109 ORTHO05D009894 6.7e-09 65.1 195 30.8
Eucgr.I02808 Eucalyptus grandis HOM05D008109 ORTHO05D009894 8.7e-09 64.7 175 37.7
Sed0011083 Sechium edule HOM05D008109 ORTHO05D009894 1.9e-08 63.5 171 38.6
CsaV3_7G031540 Cucumis sativus L. HOM05D008109 ORTHO05D009894 2.5e-08 63.2 183 33.3
Gohir.D05G111100 Gossypium hirsutum HOM05D008109 ORTHO05D009894 2.5e-08 63.2 178 35.4
Lj3g0014063 Lotus japonicus HOM05D008109 ORTHO05D009894 2.5e-08 63.2 180 32.8
AL4G27230 Arabidopsis lyrata HOM05D011216 ORTHO05D009894 3.3e-08 62.8 179 35.2
C04p17830 Brassica napus HOM05D011216 ORTHO05D009894 3.3e-08 62.8 173 32.4
BolC4t23331H Brassica oleracea HOM05D011216 ORTHO05D009894 3.3e-08 62.8 173 32.4
AL80U10010 Arabidopsis lyrata HOM05D011216 ORTHO05D009894 9.7e-08 61.2 179 34.6
Gorai.009G115400 Gossypium raimondii HOM05D008109 ORTHO05D009894 2.2e-07 60.1 178 34.8
Cc02_g26790 Coffea canephora HOM05D008109 ORTHO05D009894 2.8e-07 59.7 188 35.6
Thhalv10017383m.g Eutrema salsugineum HOM05D011216 ORTHO05D009894 2.8e-07 59.7 173 34.1
MBI01_g20511_MAGBIO Magnolia biondii HOM05D011216 ORTHO05D009894 3.7e-07 59.3 186 36.0
Cc02_g26780 Coffea canephora HOM05D008109 ORTHO05D009894 8.2e-07 58.2 190 33.7
Dinv43505 Davidia involucrata HOM05D008109 ORTHO05D009894 1.8e-06 57.0 156 36.5
AT2G31930 Arabidopsis thaliana HOM05D011216 ORTHO05D009894 2.4e-06 56.6 175 34.9
ClCG09G003640 Citrullus lanatus HOM05D008109 ORTHO05D009894 5.3e-06 55.5 160 38.1
Carub.0004s1323 Capsella rubella HOM05D011216 ORTHO05D009894 9.0e-06 54.7 183 30.1


User provided reference genes

Program Settings