Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G020000 Populus trichocarpa HOM05D002687 ORTHO05D002052 5.9e-86 320.9 165 100.0
Sabra09G0012300 Salix brachista HOM05D002687 ORTHO05D002052 1.1e-55 220.3 231 57.6
Medtr4g051652 Medicago truncatula HOM05D002687 ORTHO05D002052 3.1e-18 95.9 199 33.2
TPR.G4667 Trifolium pratense HOM05D002687 ORTHO05D002052 4.5e-17 92.0 207 31.4
Glyma.12G093700 Glycine max HOM05D002687 ORTHO05D002052 2.1e-14 83.2 191 32.5
Lj3g0023997 Lotus japonicus HOM05D002687 ORTHO05D002052 2.7e-14 82.8 201 32.3
CANSAT54G2775 Cannabis sativa HOM05D002687 ORTHO05D002052 1.0e-13 80.9 190 28.9
Eucgr.B03820 Eucalyptus grandis HOM05D002687 ORTHO05D002052 1.0e-13 80.9 225 30.2
TAR633G1301 Trochodendron aralioides HOM05D002687 ORTHO05D002052 5.1e-13 78.6 197 29.4
QL01p011200 Quercus lobata HOM05D002687 ORTHO05D002052 6.7e-13 78.2 88 46.6
TAR633G0472 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.5e-12 77.0 189 30.2
Nn6g34716 Nelumbo nucifera HOM05D002687 ORTHO05D002052 2.5e-12 76.3 189 28.6
Phvul.011G098100 Phaseolus vulgaris HOM05D002687 ORTHO05D002052 5.6e-12 75.1 186 31.2
TAR633G0261 Trochodendron aralioides HOM05D002687 ORTHO05D002052 9.6e-12 74.3 206 29.1
Atru.chr3.3133 Acer truncatum HOM05D002687 ORTHO05D002052 2.1e-11 73.2 196 28.6
Dinv17088 Davidia involucrata HOM05D002687 ORTHO05D002052 4.8e-11 72.0 189 28.0
Nitab4.5_0000158g0010 Nicotiana tabacum HOM05D002687 ORTHO05D002052 4.8e-11 72.0 102 40.2
Thecc.09G274300 Theobroma cacao HOM05D002687 ORTHO05D002052 1.1e-10 70.9 197 25.9
Nitab4.5_0000893g0110 Nicotiana tabacum HOM05D002687 ORTHO05D002052 1.4e-10 70.5 102 38.2
TAR369G0448 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.8e-10 70.1 205 26.3
Nn2g14281 Nelumbo nucifera HOM05D002687 ORTHO05D002052 2.4e-10 69.7 94 41.5
CAN.G1463.1 Capsicum annuum HOM05D002687 ORTHO05D002065 4.0e-10 68.9 135 32.6
Medtr2g087080 Medicago truncatula HOM05D002687 ORTHO05D002052 4.0e-10 68.9 211 28.0
TAR623G0011 Trochodendron aralioides HOM05D002687 ORTHO05D002052 5.3e-10 68.6 204 28.9
Haze_23312 Corylus avellana HOM05D002687 ORTHO05D002052 9.0e-10 67.8 213 26.3
TAR636G0437 Trochodendron aralioides HOM05D002687 ORTHO05D002052 9.0e-10 67.8 192 27.1
TAR636G3204 Trochodendron aralioides HOM05D002687 ORTHO05D002052 9.0e-10 67.8 192 27.1
Eucgr.B03819 Eucalyptus grandis HOM05D002687 ORTHO05D002052 1.2e-09 67.4 190 27.4
BcaB06g28135 Brassica carinata HOM05D002687 ORTHO05D002052 2.0e-09 66.6 118 37.3
TAR623G1724 Trochodendron aralioides HOM05D002687 ORTHO05D002052 2.0e-09 66.6 162 29.6
Lsat_1_v5_gn_3_114060 Lactuca sativa HOM05D002687 ORTHO05D002052 3.4e-09 65.9 191 26.2
PSO339G2661 Papaver somniferum HOM05D002687 ORTHO05D002052 3.4e-09 65.9 96 36.5
PGSC0003DMG400005897 Solanum tuberosum HOM05D002687 ORTHO05D002052 3.4e-09 65.9 146 32.9
Ciclev10029214m.g Citrus clementina HOM05D002687 ORTHO05D002052 5.8e-09 65.1 113 31.9
Cc01_g08570 Coffea canephora HOM05D002687 ORTHO05D002052 7.6e-09 64.7 103 38.8
MBI01_g04539_MAGBIO Magnolia biondii HOM05D002687 ORTHO05D002052 7.6e-09 64.7 95 41.1
CiPaw.14G095600 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.0e-08 64.3 96 42.7
CiPaw.14G095800 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.0e-08 64.3 96 42.7
Dinv08137 Davidia involucrata HOM05D002687 ORTHO05D002052 1.0e-08 64.3 95 35.8
Eucgr.J00543 Eucalyptus grandis HOM05D002687 ORTHO05D002052 1.0e-08 64.3 191 25.7
PSO384G1068 Papaver somniferum HOM05D002687 ORTHO05D002052 1.0e-08 64.3 96 36.5
HanXRQChr12g0382031 Helianthus annuus HOM05D002687 ORTHO05D002052 1.3e-08 63.9 188 26.1
HanXRQChr13g0420231 Helianthus annuus HOM05D002687 ORTHO05D002052 1.7e-08 63.5 194 24.7
BcaC02g08259 Brassica carinata HOM05D002687 ORTHO05D002052 2.2e-08 63.2 138 35.5
C04p56620 Brassica napus HOM05D002687 ORTHO05D002052 2.2e-08 63.2 138 35.5
BolC4t27189H Brassica oleracea HOM05D002687 ORTHO05D002052 2.2e-08 63.2 138 35.5
Carub.0001s0701 Capsella rubella HOM05D002687 ORTHO05D002052 2.9e-08 62.8 94 38.3
MD03G1153500 Malus domestica HOM05D002687 ORTHO05D002052 4.9e-08 62.0 213 25.4
Solyc06g074050.3 Solanum lycopersicum HOM05D002687 ORTHO05D002052 6.5e-08 61.6 95 34.7
THA.LOC104826444 Tarenaya hassleriana HOM05D002687 ORTHO05D002052 6.5e-08 61.6 149 29.5
CSS0030865 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 8.4e-08 61.2 94 36.2
CSS0032031 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 8.4e-08 61.2 94 36.2
CDE04G2921 Ceratophyllum demersum HOM05D002687 ORTHO05D002052 8.4e-08 61.2 93 35.5
Nn2g14283 Nelumbo nucifera HOM05D002687 ORTHO05D002052 8.4e-08 61.2 181 26.5
Nitab4.5_0000380g0140 Nicotiana tabacum HOM05D002687 ORTHO05D002052 8.4e-08 61.2 135 31.9
FAN11G1248 Fragaria x ananassa HOM05D002687 ORTHO05D002052 1.1e-07 60.8 189 26.5
THA.LOC104800513 Tarenaya hassleriana HOM05D002687 ORTHO05D002052 1.1e-07 60.8 97 38.1
PGSC0003DMG400019632 Solanum tuberosum HOM05D002687 ORTHO05D002052 1.4e-07 60.5 95 35.8
CiPaw.14G095900 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.9e-07 60.1 116 38.8
DCAR_010643 Daucus carota HOM05D002687 ORTHO05D002052 1.9e-07 60.1 92 34.8
Lsat_1_v5_gn_2_38441 Lactuca sativa HOM05D002687 ORTHO05D002052 1.9e-07 60.1 99 32.3
QL12p000905 Quercus lobata HOM05D030319 ORTHO05D024879 1.9e-07 60.1 93 32.3
VMungo1127G1798 Vigna mungo HOM05D002687 ORTHO05D002052 1.9e-07 60.1 214 27.1
FAN16G1005 Fragaria x ananassa HOM05D002687 ORTHO05D002052 2.5e-07 59.7 189 25.4
Hma1.2p1_0097F.1_g048090 Hydrangea macrophylla HOM05D002687 ORTHO05D002052 2.5e-07 59.7 97 35.1
Sabra16G0125800 Salix brachista HOM05D002687 ORTHO05D002052 2.5e-07 59.7 113 35.4
Aa31LG5G8690 Aethionema arabicum HOM05D002687 ORTHO05D002052 3.2e-07 59.3 99 36.4
A04p20800 Brassica napus HOM05D002687 ORTHO05D002052 3.2e-07 59.3 102 38.2
BraA04t17653Z Brassica rapa HOM05D002687 ORTHO05D002052 3.2e-07 59.3 102 38.2
CiPaw.14G095400 Carya illinoinensis HOM05D002687 ORTHO05D002052 3.2e-07 59.3 116 37.1
Cfa016686 Carpinus fangiana HOM05D002687 ORTHO05D002052 4.2e-07 58.9 144 29.9
Duzib168G2137 Durio zibethinus HOM05D002687 ORTHO05D002052 4.2e-07 58.9 102 34.3
FAN21G1704 Fragaria x ananassa HOM05D002687 ORTHO05D002052 4.2e-07 58.9 191 24.6
Gohir.A09G098101 Gossypium hirsutum HOM05D002687 ORTHO05D002052 4.2e-07 58.9 134 34.3
MD00G1129000 Malus domestica HOM05D002687 ORTHO05D002052 4.2e-07 58.9 190 24.7
Medtr4g051672 Medicago truncatula HOM05D002687 ORTHO05D002052 4.2e-07 58.9 104 28.8
Solyc11g068900.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 4.2e-07 58.9 102 34.3
Sopen11g027610 Solanum pennellii HOM05D002687 ORTHO05D002052 4.2e-07 58.9 102 34.3
AL4G21170 Arabidopsis lyrata HOM05D002687 ORTHO05D002052 5.5e-07 58.5 94 38.3
CiPaw.13G131000 Carya illinoinensis HOM05D002687 ORTHO05D002052 5.5e-07 58.5 114 30.7
FvH4_3g26690 Fragaria vesca HOM05D002687 ORTHO05D002052 5.5e-07 58.5 189 25.9
Rhsim13G0195600 Rhododendron simsii HOM05D002687 ORTHO05D002052 5.5e-07 58.5 109 33.9
Sopen06g030470 Solanum pennellii HOM05D002687 ORTHO05D002052 5.5e-07 58.5 110 32.7
Actinidia37067 Actinidia chinensis HOM05D002687 ORTHO05D002052 7.1e-07 58.2 162 28.4
Ciclev10029940m.g Citrus clementina HOM05D002687 ORTHO05D002052 7.1e-07 58.2 90 35.6
MELO3C014517.2 Cucumis melo HOM05D002687 ORTHO05D002052 7.1e-07 58.2 208 26.0
Manes.11G165500 Manihot esculenta HOM05D002687 ORTHO05D002052 7.1e-07 58.2 199 22.6
Nitab4.5_0000657g0070 Nicotiana tabacum HOM05D002687 ORTHO05D002052 7.1e-07 58.2 95 32.6
QL01p011302 Quercus lobata HOM05D002687 ORTHO05D002052 7.1e-07 58.2 110 32.7
Sc12g0004850 Simmondsia chinensis HOM05D002687 ORTHO05D002052 7.1e-07 58.2 96 33.3
Ah.15g100060 Amaranthus hybridus HOM05D002687 ORTHO05D002052 9.3e-07 57.8 97 30.9
Thhalv10002076m.g Eutrema salsugineum HOM05D002687 ORTHO05D002052 9.3e-07 57.8 94 39.4
unitig_899.g15378 Utricularia gibba HOM05D002687 ORTHO05D002052 9.3e-07 57.8 96 34.4
CsaV3_6G038540 Cucumis sativus L. HOM05D002687 ORTHO05D002052 1.2e-06 57.4 208 25.5
ECA238G0184 Erigeron canadensis HOM05D002687 ORTHO05D002052 1.2e-06 57.4 97 34.0
PGR102G2886 Punica granatum HOM05D002687 ORTHO05D002052 1.2e-06 57.4 134 31.3
Sc21g0006860 Simmondsia chinensis HOM05D002687 ORTHO05D002052 1.2e-06 57.4 93 33.3
BcaC02g10865 Brassica carinata HOM05D002687 ORTHO05D002052 1.6e-06 57.0 94 37.2
C04p24310 Brassica napus HOM05D002687 ORTHO05D002052 1.6e-06 57.0 94 37.2
BolC4t23929H Brassica oleracea HOM05D002687 ORTHO05D002052 1.6e-06 57.0 94 37.2
CARHR119770 Cardamine hirsuta HOM05D002687 ORTHO05D002052 1.6e-06 57.0 94 37.2
CiPaw.09G020300 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.6e-06 57.0 103 34.0
Actinidia07275 Actinidia chinensis HOM05D002687 ORTHO05D002052 2.1e-06 56.6 81 35.8
AT2G27260 Arabidopsis thaliana HOM05D002687 ORTHO05D002052 2.1e-06 56.6 94 35.1
BcaB02g10079 Brassica carinata HOM05D002687 ORTHO05D002052 2.1e-06 56.6 94 38.3
RcHm_v2.0_Chr5g0048091 Rosa chinensis HOM05D002687 ORTHO05D002052 2.7e-06 56.2 103 31.1
Aqoxy1G00685 Aquilegia oxysepala HOM05D002687 ORTHO05D002052 3.5e-06 55.8 112 33.9
ClCG02G022410 Citrullus lanatus HOM05D002687 ORTHO05D002052 3.5e-06 55.8 112 33.0
QL07p036935 Quercus lobata HOM05D002687 ORTHO05D002052 3.5e-06 55.8 98 35.7
Rhsim01G0201900 Rhododendron simsii HOM05D002687 ORTHO05D002052 3.5e-06 55.8 96 34.4
Cfa009946 Carpinus fangiana HOM05D002687 ORTHO05D002052 6.0e-06 55.1 123 32.5
CiPaw.10G094600 Carya illinoinensis HOM05D002687 ORTHO05D002052 6.0e-06 55.1 103 33.0
Oeu035584.1 Olea europaea HOM05D002687 ORTHO05D002052 6.0e-06 55.1 113 34.5
Migut.N02460 Erythranthe guttata HOM05D002687 ORTHO05D002052 7.9e-06 54.7 111 32.4
Potri.001G218300 Populus trichocarpa HOM05D002687 ORTHO05D002052 7.9e-06 54.7 115 33.0
QL07p036916 Quercus lobata HOM05D008136 ORTHO05D002052 7.9e-06 54.7 120 27.5


User provided reference genes

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