Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G221801 Populus trichocarpa HOM05D008037 ORTHO05D004271 2.5e-12 73.9 33 100.0
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 3.3e-12 73.6 33 97.0
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 4.3e-12 73.2 32 96.9
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 4.3e-12 73.2 32 96.9
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 5.6e-12 72.8 32 93.8
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 5.6e-12 72.8 32 93.8
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 9.6e-12 72.0 32 93.8
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 9.6e-12 72.0 32 93.8
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 1.2e-11 71.6 31 96.8
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 1.2e-11 71.6 31 96.8
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.2e-11 71.6 31 96.8
CDE02G0533 Ceratophyllum demersum HOM05D008037 ORTHO05D004271 1.6e-11 71.2 32 93.8
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 1.6e-11 71.2 32 93.8
Nitab4.5_0012234g0010 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.6e-11 71.2 32 93.8
Solyc09g011150.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 1.6e-11 71.2 32 93.8
Nitab4.5_0000066g0170 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.1e-11 70.9 32 90.6
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 3.6e-11 70.1 32 90.6
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 3.6e-11 70.1 33 90.9
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 3.6e-11 70.1 32 90.6
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 3.6e-11 70.1 32 90.6
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 4.7e-11 69.7 31 93.5
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 4.7e-11 69.7 31 93.5
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 4.7e-11 69.7 31 93.5
Solyc00g500344.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 4.7e-11 69.7 31 93.5
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 6.2e-11 69.3 32 90.6
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 6.2e-11 69.3 32 87.5
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 8.1e-11 68.9 31 90.3
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.1e-10 68.6 31 93.5
Solyc04g082990.3 Solanum lycopersicum HOM05D005978 ORTHO05D004271 1.1e-10 68.6 32 87.5
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.4e-10 68.2 31 90.3
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 1.4e-10 68.2 32 90.6
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.8e-10 67.8 31 93.5
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 1.8e-10 67.8 33 90.9
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 3.1e-10 67.0 32 90.6
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 4.0e-10 66.6 32 87.5
arahy.Tifrunner.gnm1.ann1.61DFKT Arachis hypogaea HOM05D008037 ORTHO05D004271 6.8e-10 65.9 28 96.4
COL.COLO4_33462 Corchorus olitorius HOM05D008016 ORTHO05D004271 1.2e-09 65.1 32 90.6
Peaxi162Scf00210g00153 Petunia axillaris HOM05D008037 ORTHO05D004271 1.5e-09 64.7 33 84.8
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.0e-09 64.3 33 84.8
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 2.0e-09 64.3 32 84.4
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 4.4e-09 63.2 30 86.7
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 7.6e-09 62.4 32 81.2
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.6e-09 62.4 31 83.9
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.3e-08 61.6 32 84.4
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 1.7e-08 61.2 30 86.7
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.7e-08 61.2 31 83.9
arahy.Tifrunner.gnm1.ann1.M1FG7L Arachis hypogaea HOM05D008354 ORTHO05D010055 4.9e-08 59.7 29 89.7
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.1e-07 58.5 30 83.3
EL10Ac5g11360 Beta vulgaris HOM05D008037 ORTHO05D004271 1.1e-07 58.5 30 80.0
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.1e-07 58.5 31 80.6
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 3.2e-07 57.0 30 83.3
Migut.A01208 Erythranthe guttata HOM05D008016 ORTHO05D004271 1.6e-06 54.7 23 100.0
Solyc05g047670.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-06 54.7 23 100.0
Nitab4.5_0008665g0060 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.1e-06 54.3 28 78.6
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 7.8e-06 52.4 33 75.8


User provided reference genes

Program Settings