Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 2.7e-84 315.5 181 100.0
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 9.8e-50 200.7 190 65.8
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 3.3e-45 185.7 188 64.4
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 1.6e-31 140.2 186 59.7
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 3.6e-28 129.0 204 51.0
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 4.7e-28 128.6 185 52.4
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 1.1e-27 127.5 66 89.4
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 6.8e-27 124.8 196 44.4
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 6.8e-27 124.8 197 53.8
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 2.4e-24 116.3 187 56.1
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 9.2e-24 114.4 205 50.7
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 3.5e-23 112.5 212 44.8
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 4.6e-23 112.1 192 49.5
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 5.1e-22 108.6 199 48.7
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 8.6e-22 107.8 189 49.7
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 1.9e-21 106.7 144 52.8
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 3.3e-21 105.9 197 47.2
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 1.6e-20 103.6 196 49.5
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 2.8e-20 102.8 181 47.0
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 3.6e-20 102.4 187 44.9
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 3.6e-20 102.4 142 60.6
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 8.1e-20 101.3 211 42.7
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 1.8e-19 100.1 211 43.6
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.8e-19 100.1 201 42.3
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 1.8e-19 100.1 207 47.3
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 3.1e-19 99.4 73 67.1
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 3.1e-19 99.4 73 64.4
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 4.0e-19 99.0 211 40.3
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 8.9e-19 97.8 142 48.6
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 1.5e-18 97.1 202 46.5
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 2.6e-18 96.3 188 46.8
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 2.6e-18 96.3 185 47.0
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 2.6e-18 96.3 206 45.1
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 4.4e-18 95.5 212 43.4
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 5.8e-18 95.1 134 50.7
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 7.5e-18 94.7 213 41.3
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 1.3e-17 94.0 192 47.4
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 1.7e-17 93.6 189 42.3
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 2.2e-17 93.2 188 45.7
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 2.9e-17 92.8 195 40.5
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 1.9e-16 90.1 73 61.6
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.9e-16 90.1 73 61.6
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.9e-16 90.1 73 61.6
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.9e-16 90.1 73 61.6
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 1.9e-16 90.1 213 38.5
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 4.1e-16 89.0 197 44.2
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 9.2e-16 87.8 73 61.6
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 1.6e-15 87.0 172 50.0
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 2.1e-15 86.7 208 41.8
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.7e-15 86.3 71 60.6
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 3.5e-15 85.9 134 56.0
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 4.6e-15 85.5 193 48.2
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 4.6e-15 85.5 211 47.4
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 7.8e-15 84.7 193 44.6
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 1.0e-14 84.3 179 45.3
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 1.7e-14 83.6 197 43.1
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 1.7e-14 83.6 212 45.8
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 2.3e-14 83.2 208 44.2
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 3.9e-14 82.4 196 43.4
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 8.6e-14 81.3 148 48.0
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 1.5e-13 80.5 196 35.2
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.5e-13 80.5 143 46.9
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 1.9e-13 80.1 209 45.5
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 1.9e-13 80.1 209 45.5
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 1.9e-13 80.1 202 36.6
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 3.3e-13 79.3 199 34.7
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 3.3e-13 79.3 200 35.0
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 7.3e-13 78.2 184 38.6
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 9.6e-13 77.8 210 46.7
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 2.1e-12 76.6 202 43.1
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 2.1e-12 76.6 176 38.6
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 2.8e-12 76.3 202 43.1
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 2.8e-12 76.3 194 45.4
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 2.8e-12 76.3 138 45.7
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 3.6e-12 75.9 193 47.2
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 3.6e-12 75.9 196 39.3
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 4.7e-12 75.5 189 42.9
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 6.2e-12 75.1 196 35.7
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 8.1e-12 74.7 195 33.3
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 1.8e-11 73.6 175 48.0
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 3.1e-11 72.8 190 42.6
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 3.1e-11 72.8 105 51.4
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 5.2e-11 72.0 192 47.4
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 6.8e-11 71.6 191 41.9
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 2.0e-10 70.1 160 39.4
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 4.4e-10 68.9 191 38.7
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 4.4e-10 68.9 72 52.8
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 2.2e-09 66.6 53 56.6
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 2.9e-09 66.2 144 47.9
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 2.9e-09 66.2 212 44.8
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 3.8e-09 65.9 55 61.8
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 1.9e-08 63.5 122 39.3
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 2.4e-08 63.2 172 35.5
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 2.4e-08 63.2 123 40.7
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 3.2e-08 62.8 160 43.1
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 3.2e-08 62.8 130 44.6
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 7.1e-08 61.6 190 43.2
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 4.6e-07 58.9 154 43.5
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 6.0e-07 58.5 188 35.6
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 1.0e-06 57.8 66 48.5


User provided reference genes

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