Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 5.7e-101 370.9 188 100.0
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 4.4e-93 344.7 188 93.1
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 5.7e-69 264.6 189 73.0
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 7.5e-69 264.2 191 72.8
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 2.0e-61 239.6 192 66.1
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 6.3e-60 234.6 189 67.7
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.1e-59 233.8 189 64.6
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 1.4e-59 233.4 192 65.1
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.4e-59 232.6 191 64.9
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 5.4e-59 231.5 180 67.2
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 7.0e-59 231.1 196 65.8
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 9.2e-59 230.7 193 62.7
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 1.2e-58 230.3 192 66.7
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 1.2e-58 230.3 197 61.9
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 2.7e-58 229.2 192 65.1
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 7.8e-58 227.6 193 62.2
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.7e-57 226.5 194 63.9
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 3.8e-57 225.3 189 64.6
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 6.6e-57 224.6 188 61.2
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 8.6e-57 224.2 189 63.5
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 8.6e-57 224.2 191 62.3
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 1.1e-56 223.8 188 62.2
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 1.5e-56 223.4 199 63.3
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 4.3e-56 221.9 188 60.6
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 5.6e-56 221.5 193 62.2
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 9.5e-56 220.7 186 62.4
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 1.6e-55 219.9 188 63.3
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 2.8e-55 219.2 188 60.1
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 6.1e-55 218.0 184 63.0
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 1.0e-54 217.2 189 59.8
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 1.0e-54 217.2 194 59.8
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 1.4e-54 216.9 195 60.0
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 1.4e-54 216.9 191 59.2
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 2.3e-54 216.1 189 58.7
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.0e-54 215.7 195 60.0
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 5.2e-54 214.9 195 60.5
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 5.2e-54 214.9 186 61.8
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 5.2e-54 214.9 186 61.8
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 5.2e-54 214.9 193 61.1
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.5e-53 213.4 186 61.8
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 2.6e-53 212.6 193 58.0
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 4.4e-53 211.8 197 59.9
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 5.7e-53 211.5 191 59.7
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 5.7e-53 211.5 191 58.6
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.2e-52 209.5 193 58.5
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 2.9e-52 209.1 192 60.4
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.9e-52 209.1 164 64.6
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 4.1e-51 205.3 191 58.6
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 5.4e-51 204.9 191 57.1
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.6e-50 203.4 189 57.1
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 2.0e-50 203.0 189 57.7
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 2.7e-50 202.6 191 55.5
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 2.7e-50 202.6 188 56.9
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 3.5e-50 202.2 187 57.8
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 4.6e-50 201.8 186 55.4
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 7.8e-50 201.1 191 57.6
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 1.0e-49 200.7 186 55.4
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 3.0e-49 199.1 195 56.9
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 5.0e-49 198.4 191 55.5
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 6.6e-49 198.0 192 56.8
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 6.6e-49 198.0 132 67.4
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 6.6e-49 198.0 190 56.8
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 8.6e-49 197.6 191 58.6
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 1.1e-48 197.2 191 58.1
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 2.5e-48 196.1 190 53.2
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 2.5e-48 196.1 185 56.2
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 4.3e-48 195.3 188 57.4
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 4.3e-48 195.3 185 58.4
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 4.3e-48 195.3 189 58.7
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 7.3e-48 194.5 184 56.5
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 9.5e-48 194.1 194 55.7
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 1.2e-47 193.7 192 55.7
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 4.7e-47 191.8 188 56.9
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 6.2e-47 191.4 191 57.1
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 8.0e-47 191.0 184 58.2
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 8.0e-47 191.0 193 54.9
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 8.0e-47 191.0 189 54.0
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 1.1e-46 190.7 131 69.5
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 1.8e-46 189.9 187 55.6
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 6.8e-46 188.0 186 54.8
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 2.6e-45 186.0 187 55.6
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 2.6e-45 186.0 187 55.1
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 2.6e-45 186.0 187 55.6
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 7.5e-45 184.5 186 54.8
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 7.5e-45 184.5 114 75.4
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 1.7e-44 183.3 232 48.3
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 2.9e-44 182.6 190 55.3
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 4.9e-44 181.8 184 56.0
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 4.9e-44 181.8 184 56.0
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 4.9e-44 181.8 184 56.0
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 1.4e-43 180.3 187 52.9
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 1.4e-43 180.3 187 52.9
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 1.9e-43 179.9 193 49.2
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 2.3e-41 172.9 184 55.4
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 3.0e-41 172.6 132 63.6
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.9e-41 172.2 127 59.1
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 8.6e-41 171.0 186 51.6
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 5.6e-40 168.3 194 44.8
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.2e-39 167.2 115 68.7
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 5.2e-38 161.8 111 69.4
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 2.6e-37 159.5 186 47.8
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 2.9e-36 156.0 168 53.6
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.7e-36 155.6 127 55.9
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 8.3e-36 154.5 168 53.6
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 2.4e-35 152.9 125 63.2
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 1.1e-32 144.1 190 42.1
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.8e-31 139.4 96 69.8
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 6.2e-31 138.3 191 41.9
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 1.1e-30 137.5 81 79.0
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 1.1e-30 137.5 187 42.2
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 5.2e-30 135.2 178 46.1
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 2.0e-29 133.3 189 44.4
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.2e-28 129.8 99 55.6
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 4.1e-27 125.6 97 57.7
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 5.4e-27 125.2 66 87.9
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 6.2e-23 111.7 132 53.0
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 2.6e-21 106.3 113 49.6
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 6.6e-17 91.7 181 34.3
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 2.1e-15 86.7 136 36.0
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 4.8e-15 85.5 120 40.0
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 1.8e-14 83.6 100 54.0
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 5.3e-14 82.0 103 52.4
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 3.8e-12 75.9 114 31.6
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.8e-09 67.0 99 46.5
Sabra10G0014900 Salix brachista HOM05D006081 ORTHO05D007628 1.6e-07 60.5 46 73.9
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 3.7e-07 59.3 44 65.9
Hma1.2p1_1676F.1_g297010 Hydrangea macrophylla HOM05D006081 ORTHO05D007628 8.1e-07 58.2 42 66.7


User provided reference genes

Program Settings