Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G208100 Populus trichocarpa HOM05D003821 ORTHO05D004449 4.2e-22 107.8 89 100.0
Potri.010G025000 Populus trichocarpa HOM05D003821 ORTHO05D004449 3.4e-19 98.2 89 91.0
Manes.15G012400 Manihot esculenta HOM05D003821 ORTHO05D004449 2.3e-15 85.5 88 54.5
Prupe.1G136900 Prunus persica HOM05D003821 ORTHO05D004449 4.2e-14 81.3 87 82.8
Migut.N00088 Erythranthe guttata HOM05D003821 ORTHO05D004449 7.2e-14 80.5 87 82.8
MSTRG.24794 Avicennia marina HOM05D003821 ORTHO05D004449 6.1e-13 77.4 86 50.0
FvH4_4g18020 Fragaria vesca HOM05D003821 ORTHO05D004449 6.1e-13 77.4 88 67.0
PGR031G0623 Punica granatum HOM05D003821 ORTHO05D004449 6.8e-12 73.9 89 77.5
TWI09G0102 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 6.8e-12 73.9 86 47.7
Oeu027727.1 Olea europaea HOM05D003821 ORTHO05D004449 2.0e-11 72.4 87 47.1
CANSAT78G0465 Cannabis sativa HOM05D003821 ORTHO05D004449 2.6e-11 72.0 100 56.0
Migut.G00164 Erythranthe guttata HOM05D003821 ORTHO05D004449 2.6e-11 72.0 87 48.3
Manes.03G194900 Manihot esculenta HOM05D003821 ORTHO05D004449 4.4e-11 71.2 79 84.8
TWI53G1984 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 5.7e-11 70.9 86 47.7
Hma1.2p1_0078F.1_g040550 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 7.5e-11 70.5 87 49.4
MSTRG.3917 Avicennia marina HOM05D003821 ORTHO05D004449 1.3e-10 69.7 87 48.3
Rhsim02G0009100 Rhododendron simsii HOM05D003821 ORTHO05D004449 1.7e-10 69.3 103 45.6
CiPaw.08G097300 Carya illinoinensis HOM05D003821 ORTHO05D004449 2.2e-10 68.9 80 47.5
FAN12G1096 Fragaria x ananassa HOM05D003821 ORTHO05D004449 6.3e-10 67.4 88 46.6
Nn4g25849 Nelumbo nucifera HOM05D003821 ORTHO05D004449 6.3e-10 67.4 86 53.5
Oeu026313.1 Olea europaea HOM05D003821 ORTHO05D004449 6.3e-10 67.4 89 46.1
Lj5g0023739 Lotus japonicus HOM05D003821 ORTHO05D004449 8.3e-10 67.0 82 80.5
Phvul.009G247900 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 1.4e-09 66.2 78 47.4
Psat3g022560 Pisum sativum HOM05D003821 ORTHO05D004449 1.4e-09 66.2 89 43.8
CiPaw.07G106400 Carya illinoinensis HOM05D003821 ORTHO05D004449 2.4e-09 65.5 78 46.2
Gohir.D08G138600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 2.4e-09 65.5 88 54.5
TAR365G0642 Trochodendron aralioides HOM05D003821 ORTHO05D004449 2.4e-09 65.5 88 75.0
Ca_10352_v3 Cicer arietinum L. HOM05D003821 ORTHO05D004449 4.1e-09 64.7 88 43.2
FvH4_2g25350 Fragaria vesca HOM05D003821 ORTHO05D004449 4.1e-09 64.7 80 63.8
THA.LOC104802574 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 4.1e-09 64.7 83 79.5
Thecc.04G284600 Theobroma cacao HOM05D003821 ORTHO05D004449 4.1e-09 64.7 86 48.8
Ciclev10023083m.g Citrus clementina HOM05D003821 ORTHO05D004449 5.4e-09 64.3 88 75.0
Potri.014G131701 Populus trichocarpa HOM05D003821 ORTHO05D004449 5.4e-09 64.3 83 67.5
SGA_v2.0_scaffold147G36288 Striga asiatica HOM05D003821 ORTHO05D004449 5.4e-09 64.3 87 46.0
Thecc.01G297100 Theobroma cacao HOM05D003821 ORTHO05D004449 5.4e-09 64.3 90 75.6
Prupe.8G258100 Prunus persica HOM05D003821 ORTHO05D004449 7.0e-09 63.9 90 75.6
AT4G15802 Arabidopsis thaliana HOM05D003821 ORTHO05D004449 1.2e-08 63.2 89 43.8
Gohir.A08G117600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 1.2e-08 63.2 88 56.8
Manes.01G217100 Manihot esculenta HOM05D003821 ORTHO05D004449 1.2e-08 63.2 89 75.3
PGR004G1635 Punica granatum HOM05D003821 ORTHO05D004449 1.2e-08 63.2 78 84.6
AL7G39490 Arabidopsis lyrata HOM05D003821 ORTHO05D004449 1.6e-08 62.8 89 43.8
Carub.0007s2585 Capsella rubella HOM05D003821 ORTHO05D004449 1.6e-08 62.8 83 44.6
Duzib138G0767 Durio zibethinus HOM05D003821 ORTHO05D004449 2.0e-08 62.4 87 71.3
Sabra10G0014100 Salix brachista HOM05D003821 ORTHO05D004449 2.0e-08 62.4 31 96.8
THA.LOC104820264 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 2.0e-08 62.4 83 63.9
CARHR290310 Cardamine hirsuta HOM05D003821 ORTHO05D004449 2.7e-08 62.0 89 43.8
COL.COLO4_13871 Corchorus olitorius HOM05D003821 ORTHO05D004449 3.5e-08 61.6 94 42.6
THA.LOC104817510 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 5.9e-08 60.8 88 70.5
SGA_v2.0_scaffold428G51522 Striga asiatica HOM05D003821 ORTHO05D004449 7.8e-08 60.5 86 43.0
Nitab4.5_0000570g0120 Nicotiana tabacum HOM05D003821 ORTHO05D004449 1.3e-07 59.7 88 43.2
TWI14G0562 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.3e-07 59.7 86 75.6
BcaB04g18333 Brassica carinata HOM05D003821 ORTHO05D004449 2.3e-07 58.9 87 43.7
C01p27060 Brassica napus HOM05D003821 ORTHO05D004449 2.3e-07 58.9 31 87.1
Sp7g14190 Schrenkiella parvula HOM05D003821 ORTHO05D004449 2.3e-07 58.9 31 87.1
Atru.chr5.1182 Acer truncatum HOM05D003821 ORTHO05D004449 2.9e-07 58.5 78 78.2
MELO3C016019.2 Cucumis melo HOM05D003821 ORTHO05D004449 2.9e-07 58.5 31 87.1
Gohir.D12G011000 Gossypium hirsutum HOM05D003821 ORTHO05D004449 2.9e-07 58.5 90 74.4
RcHm_v2.0_Chr4g0422231 Rosa chinensis HOM05D003821 ORTHO05D004449 2.9e-07 58.5 31 87.1
Glyma.10G019600 Glycine max HOM05D003821 ORTHO05D004449 3.9e-07 58.2 89 73.0
Gohir.A12G010600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 3.9e-07 58.2 80 77.5
Duzib133G0834 Durio zibethinus HOM05D003821 ORTHO05D004449 5.0e-07 57.8 89 71.9
Nitab4.5_0000191g0110 Nicotiana tabacum HOM05D003821 ORTHO05D004449 5.0e-07 57.8 115 37.4
THA.LOC104821775 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 5.0e-07 57.8 71 84.5
BolC7t45268H Brassica oleracea HOM05D003821 ORTHO05D004449 6.6e-07 57.4 87 42.5
Cc03_g01940 Coffea canephora HOM05D003821 ORTHO05D004449 6.6e-07 57.4 31 87.1
Glyma.02G154700 Glycine max HOM05D003821 ORTHO05D004449 6.6e-07 57.4 89 73.0
Peaxi162Scf00086g00435 Petunia axillaris HOM05D003821 ORTHO05D004449 6.6e-07 57.4 31 83.9
Psat6g166600 Pisum sativum HOM05D003821 ORTHO05D004449 6.6e-07 57.4 88 65.9
BraA03t14035Z Brassica rapa HOM05D003821 ORTHO05D004449 8.6e-07 57.0 86 43.0
CAN.G185.14 Capsicum annuum HOM05D003821 ORTHO05D004449 8.6e-07 57.0 88 42.0
Gohir.A02G049300 Gossypium hirsutum HOM05D003821 ORTHO05D004449 8.6e-07 57.0 87 71.3
Lalb_Chr15g0078581 Lupinus albus HOM05D003821 ORTHO05D004449 8.6e-07 57.0 31 83.9
MD11G1304500 Malus domestica HOM05D003821 ORTHO05D004449 8.6e-07 57.0 31 83.9
Sabra08G0153500 Salix brachista HOM05D003821 ORTHO05D004449 8.6e-07 57.0 129 38.0
GSVIVG01017758001 Vitis vinifera HOM05D003821 ORTHO05D004449 8.6e-07 57.0 31 87.1
BcaC06g32965 Brassica carinata HOM05D003821 ORTHO05D004449 1.1e-06 56.6 83 43.4
Haze_04896 Corylus avellana HOM05D003821 ORTHO05D004449 1.1e-06 56.6 108 38.9
Nn3g21436 Nelumbo nucifera HOM05D000763 ORTHO05D000599 1.1e-06 56.6 31 80.6
RcHm_v2.0_Chr6g0293541 Rosa chinensis HOM05D003821 ORTHO05D004449 1.1e-06 56.6 31 80.6
Hund05412 Selenicereus undatus HOM05D003821 ORTHO05D004449 1.1e-06 56.6 31 83.9
CANSAT25G1361 Cannabis sativa HOM05D003821 ORTHO05D004449 1.5e-06 56.2 88 59.1
Gorai.008G011000 Gossypium raimondii HOM05D003821 ORTHO05D004449 1.5e-06 56.2 89 74.2
Lalb_Chr18g0047131 Lupinus albus HOM05D003821 ORTHO05D004449 1.9e-06 55.8 31 83.9
TPR.G9594 Trifolium pratense HOM05D003821 ORTHO05D004449 1.9e-06 55.8 31 80.6
unitig_748.g8733 Utricularia gibba HOM05D003821 ORTHO05D004449 1.9e-06 55.8 85 42.4
FAN17G0959 Fragaria x ananassa HOM05D003821 ORTHO05D004449 2.5e-06 55.5 84 44.0
QL10p053326 Quercus lobata HOM05D003821 ORTHO05D004449 2.5e-06 55.5 31 80.6
QL10p054532 Quercus lobata HOM05D003821 ORTHO05D004449 2.5e-06 55.5 31 80.6
BcaNung00244 Brassica carinata HOM05D000802 ORTHO05D013138 3.3e-06 55.1 89 42.7
Ciclev10007067m.g Citrus clementina HOM05D003821 ORTHO05D004449 3.3e-06 55.1 31 80.6
SalBow2G1159 Salvia bowleyana HOM05D003821 ORTHO05D004449 4.3e-06 54.7 102 42.2
VMungo1309G1076 Vigna mungo HOM05D003821 ORTHO05D004449 7.3e-06 53.9 80 42.5
BraA01t02079Z Brassica rapa HOM05D000802 ORTHO05D013138 9.5e-06 53.5 31 87.1
FAN15G2810 Fragaria x ananassa HOM05D003821 ORTHO05D004449 9.5e-06 53.5 80 41.2
FAN24G2279 Fragaria x ananassa HOM05D003821 ORTHO05D004449 9.5e-06 53.5 80 41.2
Gorai.004G142200 Gossypium raimondii HOM05D003821 ORTHO05D004449 9.5e-06 53.5 31 77.4
Medtr1g088760 Medicago truncatula HOM05D003821 ORTHO05D004449 9.5e-06 53.5 31 80.6
Medtr7g108615 Medicago truncatula HOM05D003821 ORTHO05D004449 9.5e-06 53.5 31 77.4


User provided reference genes

Program Settings