Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 1.5e-166 589.3 284 100.0
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 7.2e-140 500.7 293 85.3
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 1.1e-124 450.3 284 76.8
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 4.7e-123 444.9 282 77.3
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 4.0e-122 441.8 284 75.4
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 5.2e-122 441.4 272 78.3
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 1.1e-121 440.3 272 77.9
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.5e-121 439.9 284 77.1
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 2.0e-121 439.5 284 75.0
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 2.0e-121 439.5 284 76.8
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 2.6e-121 439.1 294 74.5
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 2.6e-121 439.1 272 77.9
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 4.4e-121 438.3 284 74.6
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.3e-120 436.8 250 81.6
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 2.2e-120 436.0 287 76.7
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 2.8e-120 435.6 284 74.3
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 6.3e-120 434.5 297 73.1
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 1.1e-119 433.7 284 74.3
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.1e-119 433.7 284 74.3
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 1.8e-119 433.0 284 75.0
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 3.1e-119 432.2 282 74.5
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 3.1e-119 432.2 282 74.5
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 5.3e-119 431.4 291 74.6
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 7.0e-119 431.0 253 83.0
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.2e-118 430.3 284 73.6
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 2.6e-118 429.1 282 74.1
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.6e-118 429.1 284 73.6
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 3.5e-118 428.7 281 74.0
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 4.5e-118 428.3 289 74.7
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 1.7e-117 426.4 288 74.0
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 1.7e-117 426.4 284 72.9
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 2.2e-117 426.0 282 73.4
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 2.9e-117 425.6 287 73.5
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 2.9e-117 425.6 284 72.9
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 2.9e-117 425.6 282 73.0
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 3.8e-117 425.2 282 73.4
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 5.5e-116 421.4 284 73.2
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 7.2e-116 421.0 284 72.5
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 9.4e-116 420.6 277 76.5
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 3.6e-115 418.7 284 74.3
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 4.7e-115 418.3 250 80.0
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 6.1e-115 417.9 291 73.5
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 1.4e-114 416.8 284 72.9
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 2.3e-114 416.0 287 72.5
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 2.3e-114 416.0 289 73.0
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 4.0e-114 415.2 292 70.5
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 4.0e-114 415.2 292 72.3
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 2.0e-113 412.9 297 70.0
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 4.4e-113 411.8 291 71.5
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 4.4e-113 411.8 287 72.1
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 5.7e-113 411.4 282 72.0
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 7.5e-113 411.0 302 71.5
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 1.3e-112 410.2 291 71.1
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 1.7e-112 409.8 284 71.8
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 6.3e-112 407.9 291 70.4
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 8.3e-112 407.5 286 72.4
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 1.1e-111 407.1 288 71.9
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 1.1e-111 407.1 288 71.9
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 1.8e-111 406.4 284 71.5
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 4.1e-111 405.2 293 69.6
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 5.4e-111 404.8 292 70.2
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 2.0e-110 402.9 293 69.3
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 5.9e-110 401.4 299 69.9
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 7.7e-110 401.0 292 69.2
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 2.9e-109 399.1 293 68.6
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 1.1e-108 397.1 293 68.3
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 1.1e-108 397.1 294 68.4
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 1.1e-108 397.1 293 68.3
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 1.1e-108 397.1 294 68.4
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 7.2e-108 394.4 246 79.7
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 4.7e-107 391.7 249 76.3
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 1.8e-106 389.8 254 74.4
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 2.6e-105 386.0 261 75.1
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 2.2e-104 382.9 254 74.4
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 1.8e-103 379.8 227 78.9
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 2.4e-103 379.4 233 79.8
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 7.0e-103 377.9 283 67.1
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 2.3e-98 362.8 254 70.5
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 8.9e-98 360.9 286 66.4
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.2e-97 360.5 285 67.4
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 2.2e-96 356.3 243 69.5
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 2.2e-96 356.3 390 52.3
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 4.6e-94 348.6 260 69.2
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 7.3e-92 341.3 252 69.8
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 1.2e-91 340.5 290 62.8
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 1.2e-91 340.5 288 63.9
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 2.8e-91 339.3 245 71.0
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 6.2e-91 338.2 246 65.0
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 1.4e-87 327.0 225 71.1
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 5.6e-84 315.1 261 59.0
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 1.1e-82 310.8 286 57.7
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 1.4e-82 310.5 294 58.5
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 1.4e-79 300.4 532 37.4
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 3.2e-79 299.3 285 53.3
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 2.7e-78 296.2 285 56.8
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 3.0e-77 292.7 266 54.9
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 7.3e-76 288.1 193 67.9
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 3.5e-70 269.2 222 60.8
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 2.3e-69 266.5 217 59.4
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 2.8e-67 259.6 248 58.1
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 6.4e-64 248.4 163 72.4
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 2.4e-63 246.5 156 74.4
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 7.1e-63 245.0 281 49.8
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.0e-61 241.1 178 67.4
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 1.4e-58 230.7 158 70.9
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 2.1e-54 216.9 161 67.7
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 1.6e-51 207.2 175 59.4
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 1.4e-50 204.1 145 69.7
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 1.2e-49 201.1 165 64.2
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 1.5e-49 200.7 204 55.9
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 7.9e-46 188.3 130 72.3
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 4.0e-42 176.0 165 60.0
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 5.5e-39 165.6 153 54.9
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 9.3e-39 164.9 90 85.6
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 5.1e-37 159.1 127 63.8
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 6.7e-37 158.7 128 62.5
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 2.7e-30 136.7 92 70.7
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 2.2e-27 127.1 74 79.7
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 3.8e-24 116.3 201 36.3
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 8.2e-19 98.6 202 29.2
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 6.1e-14 82.4 46 82.6
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 3.7e-11 73.2 284 24.6
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 8.2e-11 72.0 48 70.8
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 8.2e-11 72.0 59 55.9
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 1.2e-06 58.2 55 56.4


User provided reference genes

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