Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G203800 Populus trichocarpa HOM05D008368 ORTHO05D010489 1.1e-14 82.8 41 100.0
EL10Ac3g06406 Beta vulgaris HOM05D008368 ORTHO05D010489 2.7e-10 68.2 40 77.5
EL10Ac3g06405 Beta vulgaris HOM05D008368 ORTHO05D010489 4.6e-10 67.4 40 75.0
CiPaw.01G161200 Carya illinoinensis HOM05D008368 ORTHO05D010489 7.9e-10 66.6 40 80.0
Cc03_g03240 Coffea canephora HOM05D008368 ORTHO05D010489 6.7e-09 63.5 40 72.5
arahy.Tifrunner.gnm1.ann1.121ATL Arachis hypogaea HOM05D008368 ORTHO05D010489 1.5e-08 62.4 38 76.3
arahy.Tifrunner.gnm1.ann1.IPV0IY Arachis hypogaea HOM05D008368 ORTHO05D010489 1.5e-08 62.4 38 76.3
MELO3C006556.2 Cucumis melo HOM05D008368 ORTHO05D010489 1.5e-08 62.4 41 73.2
Prupe.1G152900 Prunus persica HOM05D008368 ORTHO05D010489 4.3e-08 60.8 39 69.2
Actinidia08510 Actinidia chinensis HOM05D008368 ORTHO05D010489 5.7e-08 60.5 36 77.8
Ca_00633_v3 Cicer arietinum L. HOM05D008368 ORTHO05D010489 7.4e-08 60.1 38 71.1
Glyma.13G207400 Glycine max HOM05D008368 ORTHO05D010489 7.4e-08 60.1 34 82.4
Medtr2g022540 Medicago truncatula HOM05D008368 ORTHO05D010489 7.4e-08 60.1 38 73.7
Sc13g0004110 Simmondsia chinensis HOM05D008368 ORTHO05D010489 7.4e-08 60.1 40 67.5
TPR.G30686 Trifolium pratense HOM05D008368 ORTHO05D010489 7.4e-08 60.1 38 71.1
TPR.G40572 Trifolium pratense HOM05D008368 ORTHO05D010489 7.4e-08 60.1 38 71.1
CSS0036726 Camellia sinensis var. sinensis HOM05D008368 ORTHO05D010489 9.7e-08 59.7 39 69.2
AUR62038060 Chenopodium quinoa HOM05D008368 ORTHO05D010489 1.6e-07 58.9 40 65.0
AUR62038186 Chenopodium quinoa HOM05D008368 ORTHO05D010489 1.6e-07 58.9 40 65.0
Ca_00655_v3 Cicer arietinum L. HOM05D008368 ORTHO05D010489 2.2e-07 58.5 43 67.4
Phvul.006G152200 Phaseolus vulgaris HOM05D008368 ORTHO05D010489 2.2e-07 58.5 34 79.4
CsaV3_3G013620 Cucumis sativus L. HOM05D008368 ORTHO05D010489 2.8e-07 58.2 39 74.4
Psat1g182840 Pisum sativum HOM05D008368 ORTHO05D010489 3.7e-07 57.8 38 68.4
Thecc.04G224200 Theobroma cacao HOM05D008368 ORTHO05D010489 3.7e-07 57.8 40 70.0
TPR.G40393 Trifolium pratense HOM05D008368 ORTHO05D010489 8.2e-07 56.6 38 68.4
FvH4_4g14770 Fragaria vesca HOM05D008368 ORTHO05D010489 1.1e-06 56.2 39 64.1
FAN07G1534 Fragaria x ananassa HOM05D008368 ORTHO05D010489 1.1e-06 56.2 39 64.1
FAN17G1872 Fragaria x ananassa HOM05D008368 ORTHO05D010489 1.1e-06 56.2 39 64.1
MD13G1185300 Malus domestica HOM05D008368 ORTHO05D010489 1.1e-06 56.2 32 78.1
unitig_32.g10803 Utricularia gibba HOM05D008368 ORTHO05D010489 1.1e-06 56.2 39 64.1
ClCG05G005370 Citrullus lanatus HOM05D008368 ORTHO05D010489 1.4e-06 55.8 39 71.8
SalBow2G2001 Salvia bowleyana HOM05D008368 ORTHO05D010489 1.4e-06 55.8 34 76.5
Sed0011273 Sechium edule HOM05D008368 ORTHO05D010489 1.4e-06 55.8 39 69.2
Nn4g26217 Nelumbo nucifera HOM05D007833 ORTHO05D009855 1.8e-06 55.5 40 62.5
Lsat_1_v5_gn_7_68141 Lactuca sativa HOM05D008368 ORTHO05D010489 2.4e-06 55.1 32 78.1
FAN22G0200 Fragaria x ananassa HOM05D008368 ORTHO05D010489 3.1e-06 54.7 39 61.5
THA.LOC104818801 Tarenaya hassleriana HOM05D008368 ORTHO05D010489 3.1e-06 54.7 40 62.5
vmacro15316 Vaccinium macrocarpon HOM05D008368 ORTHO05D010489 3.1e-06 54.7 31 77.4
Ah.13g074090 Amaranthus hybridus HOM05D008368 ORTHO05D010489 4.1e-06 54.3 34 73.5
AL6G30580 Arabidopsis lyrata HOM05D008368 ORTHO05D010489 4.1e-06 54.3 34 67.6
AT5G19151 Arabidopsis thaliana HOM05D008368 ORTHO05D010489 4.1e-06 54.3 34 67.6
Thhalv10016117m.g Eutrema salsugineum HOM05D008368 ORTHO05D010489 4.1e-06 54.3 34 67.6
Aa31LG11G10480 Aethionema arabicum HOM05D008368 ORTHO05D010489 5.3e-06 53.9 41 58.5
BcaB05g23374 Brassica carinata HOM05D008368 ORTHO05D010489 5.3e-06 53.9 41 58.5
BcaC03g13647 Brassica carinata HOM05D008368 ORTHO05D010489 5.3e-06 53.9 41 58.5
A02p05280 Brassica napus HOM05D008368 ORTHO05D010489 5.3e-06 53.9 41 58.5
C02p10400 Brassica napus HOM05D008368 ORTHO05D010489 5.3e-06 53.9 41 58.5
BolC2t06941H Brassica oleracea HOM05D008368 ORTHO05D010489 5.3e-06 53.9 41 58.5
BraA02t05486Z Brassica rapa HOM05D008368 ORTHO05D010489 5.3e-06 53.9 41 58.5
CARHR193790 Cardamine hirsuta HOM05D008368 ORTHO05D010489 6.9e-06 53.5 34 64.7
Carub.0006s1749 Capsella rubella HOM05D008368 ORTHO05D010489 9.0e-06 53.1 34 64.7
DCAR_002404 Daucus carota HOM05D008368 ORTHO05D010489 9.0e-06 53.1 37 67.6


User provided reference genes

Program Settings