Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G202133 Populus trichocarpa HOM05D001200 ORTHO05D002731 4.8e-42 174.1 88 100.0
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 5.3e-17 90.9 89 58.4
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 9.0e-17 90.1 89 61.8
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 9.0e-17 90.1 89 61.8
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.2e-16 89.7 89 58.4
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.2e-16 89.7 89 58.4
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 1.2e-16 89.7 88 58.0
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.5e-16 89.4 89 59.6
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 1.5e-16 89.4 89 59.6
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 2.6e-16 88.6 89 59.6
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 3.4e-16 88.2 89 57.3
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 4.5e-16 87.8 89 58.4
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 5.9e-16 87.4 89 56.2
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 3.8e-15 84.7 88 54.5
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 3.8e-15 84.7 88 54.5
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 3.8e-15 84.7 88 54.5
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 5.0e-15 84.3 89 53.9
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 8.5e-15 83.6 89 56.2
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 8.5e-15 83.6 89 56.2
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 8.5e-15 83.6 89 56.2
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 8.5e-15 83.6 89 56.2
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 8.5e-15 83.6 89 56.2
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 8.5e-15 83.6 89 56.2
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 8.5e-15 83.6 89 56.2
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 8.5e-15 83.6 89 56.2
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 1.9e-14 82.4 89 53.9
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 1.9e-14 82.4 89 57.3
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 1.9e-14 82.4 89 57.3
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 3.2e-14 81.6 89 56.2
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 3.2e-14 81.6 89 56.2
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 1.6e-13 79.3 89 55.1
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 2.7e-13 78.6 89 52.8
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 2.7e-13 78.6 89 52.8
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 2.7e-13 78.6 89 52.8
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 2.7e-13 78.6 89 52.8
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 2.7e-13 78.6 89 52.8
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 2.7e-13 78.6 89 52.8
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 2.7e-13 78.6 89 52.8
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 2.7e-13 78.6 89 52.8
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 3.6e-13 78.2 89 53.9
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 6.1e-13 77.4 91 53.8
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 1.8e-12 75.9 89 50.6
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 3.9e-12 74.7 82 51.2
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.8e-12 73.6 79 55.7
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 1.1e-11 73.2 89 51.7
GSVIVG01004976001 Vitis vinifera HOM05D001200 ORTHO05D010401 2.5e-11 72.0 73 57.5
Gorai.012G007400 Gossypium raimondii HOM05D001200 ORTHO05D010401 2.8e-10 68.6 73 56.2
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 2.8e-10 68.6 89 51.7
Ciclev10030459m.g Citrus clementina HOM05D001200 ORTHO05D010401 1.8e-09 65.9 68 58.8
RcHm_v2.0_CPg0502811 Rosa chinensis HOM05D001200 ORTHO05D010401 2.4e-09 65.5 68 57.4
Lalb_Chr07g0191751 Lupinus albus HOM05D001200 ORTHO05D002731 9.1e-09 63.5 55 63.6
C06p42260 Brassica napus HOM05D001200 ORTHO05D010401 2.0e-08 62.4 46 67.4
BraSC25t45908Z Brassica rapa HOM05D001200 ORTHO05D010401 2.0e-08 62.4 46 67.4
Oeu048498.1 Olea europaea HOM05D001200 ORTHO05D010401 2.0e-08 62.4 73 49.3
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 3.4e-08 61.6 70 54.3
Migut.D01255 Erythranthe guttata HOM05D001200 ORTHO05D010401 1.0e-07 60.1 68 51.5
BolSC45t60911H Brassica oleracea HOM05D001200 ORTHO05D010401 1.3e-07 59.7 46 63.0
Solyc01g065620.1 Solanum lycopersicum HOM05D001200 ORTHO05D010401 1.7e-07 59.3 86 44.2
CAN.G386.25 Capsicum annuum HOM05D001200 ORTHO05D010401 1.4e-06 56.2 46 65.2


User provided reference genes

Program Settings