Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G198500 Populus trichocarpa HOM05D007586 ORTHO05D009554 3.5e-39 164.5 81 100.0
Sabra08G0162000 Salix brachista HOM05D007586 ORTHO05D009554 5.5e-37 157.1 81 95.1
Potri.010G028000 Populus trichocarpa HOM05D007586 ORTHO05D009554 4.7e-28 127.5 81 80.2
Atru.chr4.2702 Acer truncatum HOM05D007586 ORTHO05D009554 3.5e-23 111.3 82 70.7
Thecc.04G272400 Theobroma cacao HOM05D007586 ORTHO05D009554 1.0e-22 109.8 70 74.3
Manes.03G188100 Manihot esculenta HOM05D007586 ORTHO05D009554 1.7e-22 109.0 71 73.2
Actinidia00073 Actinidia chinensis HOM05D007586 ORTHO05D009554 3.0e-22 108.2 62 80.6
Dinv38351 Davidia involucrata HOM05D007586 ORTHO05D009554 1.5e-21 105.9 61 80.3
Nn4g26123 Nelumbo nucifera HOM05D007586 ORTHO05D009554 1.5e-21 105.9 78 69.2
GSVIVG01017851001 Vitis vinifera HOM05D007586 ORTHO05D009554 1.5e-21 105.9 62 79.0
COL.COLO4_13963 Corchorus olitorius HOM05D007586 ORTHO05D009554 2.5e-21 105.1 70 68.6
Sopen01g032230 Solanum pennellii HOM05D007586 ORTHO05D009554 7.3e-21 103.6 73 67.1
vmacro15289 Vaccinium macrocarpon HOM05D007586 ORTHO05D009554 7.3e-21 103.6 68 70.6
Gohir.D10G162600 Gossypium hirsutum HOM05D007586 ORTHO05D009554 9.5e-21 103.2 64 73.4
Gorai.011G181700 Gossypium raimondii HOM05D007586 ORTHO05D009554 9.5e-21 103.2 64 73.4
Duzib151G0133 Durio zibethinus HOM05D007586 ORTHO05D009554 1.2e-20 102.8 76 65.8
CSS0032912 Camellia sinensis var. sinensis HOM05D007586 ORTHO05D009554 1.6e-20 102.4 61 78.7
Gohir.A10G105800 Gossypium hirsutum HOM05D007586 ORTHO05D009554 2.8e-20 101.7 64 73.4
Haze_01009 Corylus avellana HOM05D007586 ORTHO05D009554 4.7e-20 100.9 63 77.8
Lalb_Chr18g0055891 Lupinus albus HOM05D007586 ORTHO05D009554 4.7e-20 100.9 75 62.7
TWI09G0380 Tripterygium wilfordii HOM05D007586 ORTHO05D009554 4.7e-20 100.9 85 61.2
DCAR_027132 Daucus carota HOM05D007586 ORTHO05D009554 6.2e-20 100.5 75 62.7
PSO832G2949 Papaver somniferum HOM05D007586 ORTHO05D009554 8.0e-20 100.1 81 61.7
QL06p006198 Quercus lobata HOM05D007586 ORTHO05D009554 8.0e-20 100.1 62 74.2
Cc03_g02750 Coffea canephora HOM05D007586 ORTHO05D009554 1.1e-19 99.8 61 75.4
Hma1.2p1_2025F.1_g311520 Hydrangea macrophylla HOM05D007586 ORTHO05D009554 1.8e-19 99.0 70 68.6
Sp6g25470 Schrenkiella parvula HOM05D007586 ORTHO05D009554 1.8e-19 99.0 73 65.8
BcaB01g04886 Brassica carinata HOM05D007586 ORTHO05D009554 2.3e-19 98.6 58 77.6
PSO210G0926 Papaver somniferum HOM05D007586 ORTHO05D009554 2.3e-19 98.6 81 60.5
unitig_749.g14058 Utricularia gibba HOM05D007586 ORTHO05D009554 3.1e-19 98.2 74 62.2
Cpa.g.sc16.72 Carica papaya HOM05D007586 ORTHO05D009554 4.0e-19 97.8 71 67.6
Migut.G00284 Erythranthe guttata HOM05D007586 ORTHO05D009554 4.0e-19 97.8 78 65.4
THA.LOC104802735 Tarenaya hassleriana HOM05D007586 ORTHO05D009554 4.0e-19 97.8 59 72.9
BcaB01g05279 Brassica carinata HOM05D007586 ORTHO05D009554 6.8e-19 97.1 73 64.4
C03p10700 Brassica napus HOM05D007586 ORTHO05D009554 6.8e-19 97.1 73 64.4
CiPaw.02G089500 Carya illinoinensis HOM05D007586 ORTHO05D009554 6.8e-19 97.1 71 64.8
EL10Ac3g07262 Beta vulgaris HOM05D007586 ORTHO05D009554 1.2e-18 96.3 61 72.1
A03p09170 Brassica napus HOM05D007586 ORTHO05D009554 1.2e-18 96.3 60 75.0
BraA03t10240Z Brassica rapa HOM05D007586 ORTHO05D009554 1.2e-18 96.3 60 75.0
SalBow2G2177 Salvia bowleyana HOM05D007586 ORTHO05D009554 1.2e-18 96.3 74 67.6
Thhalv10015193m.g Eutrema salsugineum HOM05D007586 ORTHO05D009554 1.5e-18 95.9 68 66.2
MBI19_g21636_MAGBIO Magnolia biondii HOM05D007586 ORTHO05D009554 1.5e-18 95.9 60 71.7
MD13G1177700 Malus domestica HOM05D007586 ORTHO05D009554 2.0e-18 95.5 71 69.0
Sed0005131 Sechium edule HOM05D007586 ORTHO05D009554 2.0e-18 95.5 70 64.3
Lj6g0006659 Lotus japonicus HOM05D007586 ORTHO05D009554 2.6e-18 95.1 72 62.5
Medtr2g020920 Medicago truncatula HOM05D007586 ORTHO05D009554 2.6e-18 95.1 78 59.0
Ah.04g150810 Amaranthus hybridus HOM05D007586 ORTHO05D009554 3.4e-18 94.7 70 65.7
CsaV3_6G005530 Cucumis sativus L. HOM05D007586 ORTHO05D009554 3.4e-18 94.7 71 63.4
Glyma.15G100600 Glycine max HOM05D007586 ORTHO05D009554 3.4e-18 94.7 81 59.3
BraA10t44138Z Brassica rapa HOM05D007586 ORTHO05D009554 4.4e-18 94.4 66 66.7
Cfa015540 Carpinus fangiana HOM05D007586 ORTHO05D009554 5.8e-18 94.0 63 71.4
Prupe.1G146700 Prunus persica HOM05D007586 ORTHO05D009554 9.8e-18 93.2 77 61.0
arahy.Tifrunner.gnm1.ann1.SH255N Arachis hypogaea HOM05D007586 ORTHO05D009554 1.7e-17 92.4 62 67.7
ClCG06G005620 Citrullus lanatus HOM05D007586 ORTHO05D009554 1.7e-17 92.4 71 62.0
TAR636G1069 Trochodendron aralioides HOM05D007586 ORTHO05D009554 1.7e-17 92.4 52 82.7
arahy.Tifrunner.gnm1.ann1.5VHG73 Arachis hypogaea HOM05D007586 ORTHO05D009554 2.2e-17 92.0 62 66.1
Psat1g185520 Pisum sativum HOM05D007586 ORTHO05D009554 2.2e-17 92.0 73 58.9
ECA246G1660 Erigeron canadensis HOM05D007586 ORTHO05D009554 3.7e-17 91.3 56 75.0
TPR.G18017 Trifolium pratense HOM05D007586 ORTHO05D009554 4.9e-17 90.9 89 50.6
CARHR194100 Cardamine hirsuta HOM05D007586 ORTHO05D009554 1.4e-16 89.4 51 76.5
ATR0626G363 Amborella trichopoda HOM05D007586 ORTHO05D009554 2.4e-16 88.6 73 58.9
CANSAT01G2672 Cannabis sativa HOM05D007586 ORTHO05D009554 5.4e-16 87.4 55 74.5
RcHm_v2.0_Chr4g0420101 Rosa chinensis HOM05D007586 ORTHO05D009554 5.4e-16 87.4 60 68.3
AUR62018376 Chenopodium quinoa HOM05D000949 ORTHO05D001276 7.0e-16 87.0 65 66.2
Phvul.006G158200 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 7.0e-16 87.0 77 55.8
PGR031G0345 Punica granatum HOM05D007586 ORTHO05D009554 7.0e-16 87.0 49 79.6
Phvul.006G158400 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 1.6e-15 85.9 76 56.6
COL.COLO4_25734 Corchorus olitorius HOM05D007586 ORTHO05D009554 4.6e-15 84.3 82 56.1
Glyma.13G212100 Glycine max HOM05D007586 ORTHO05D009554 4.6e-15 84.3 81 51.9
Zm00001eb349880 Zea mays HOM05D007586 ORTHO05D009554 6.0e-15 84.0 65 61.5
Aa31LG11G10810 Aethionema arabicum HOM05D007586 ORTHO05D009554 1.0e-14 83.2 61 65.6
FvH4_4g16650 Fragaria vesca HOM05D007586 ORTHO05D009554 1.3e-14 82.8 78 52.6
FAN12G0362 Fragaria x ananassa HOM05D007586 ORTHO05D009554 1.3e-14 82.8 78 52.6
Ciclev10006319m.g Citrus clementina HOM05D007586 ORTHO05D009554 3.9e-14 81.3 58 65.5
Lj3g0017006 Lotus japonicus HOM05D007586 ORTHO05D009554 3.9e-14 81.3 55 70.9
Nitab4.5_0009518g0010 Nicotiana tabacum HOM05D007586 ORTHO05D009554 6.6e-14 80.5 44 81.8
BolC3t13546H Brassica oleracea HOM05D007586 ORTHO05D009554 1.1e-13 79.7 62 62.9
AL6G30270 Arabidopsis lyrata HOM05D007586 ORTHO05D009554 3.3e-13 78.2 43 79.1
AT5G18920 Arabidopsis thaliana HOM05D007586 ORTHO05D009554 3.3e-13 78.2 43 79.1
Carub.0006s1722 Capsella rubella HOM05D007586 ORTHO05D009554 3.3e-13 78.2 43 79.1
BcaB08g36636 Brassica carinata HOM05D007586 ORTHO05D009554 4.3e-13 77.8 43 76.7
Hma1.2p1_0511F.1_g169220 Hydrangea macrophylla HOM05D000488 ORTHO05D000347 5.6e-13 77.4 55 69.1
arahy.Tifrunner.gnm1.ann1.70FWSL Arachis hypogaea HOM05D007586 ORTHO05D009554 1.2e-12 76.3 72 52.8
Nitab4.5_0000201g0230 Nicotiana tabacum HOM05D007586 ORTHO05D009554 1.6e-12 75.9 44 75.0
SEGI_37206 Sequoiadendron giganteum HOM05D007586 ORTHO05D009554 1.1e-11 73.2 54 51.9
A10p20750 Brassica napus HOM05D007586 ORTHO05D009554 2.3e-11 72.0 53 66.0
Nitab4.5_0000059g0210 Nicotiana tabacum HOM05D007586 ORTHO05D009554 5.2e-11 70.9 63 61.9
Os05g0404300 Oryza sativa ssp. japonica HOM05D007586 ORTHO05D009554 6.8e-11 70.5 52 59.6
FAN22G2185 Fragaria x ananassa HOM05D007586 ORTHO05D009554 1.2e-10 69.7 65 55.4
Medtr2g020940 Medicago truncatula HOM05D007586 ORTHO05D009554 4.4e-10 67.8 64 54.7
Ca_00589_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 3.7e-09 64.7 37 73.0
Eucgr.B01188 Eucalyptus grandis HOM05D007586 ORTHO05D009554 8.3e-09 63.5 32 84.4
Pp3c2_37920 Physcomitrium patens HOM05D007586 ORTHO05D009554 1.4e-08 62.8 65 43.1
Peaxi162Scf00095g00411 Petunia axillaris HOM05D007586 ORTHO05D009554 9.2e-08 60.1 40 70.0
Rhsim02G0016900 Rhododendron simsii HOM05D007586 ORTHO05D009554 1.7e-06 55.8 38 71.1


User provided reference genes

Program Settings