Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 3.3e-164 581.6 294 100.0
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 2.7e-113 412.5 296 75.7
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 4.2e-111 405.2 223 93.7
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 8.8e-109 397.5 297 71.0
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 3.7e-107 392.1 301 71.8
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 3.1e-106 389.0 292 68.5
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 4.1e-106 388.7 292 68.5
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 5.4e-106 388.3 293 69.3
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 7.0e-106 387.9 304 70.1
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 1.6e-105 386.7 296 69.9
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 2.0e-105 386.3 240 81.7
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 3.5e-105 385.6 286 71.7
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 7.7e-105 384.4 297 72.1
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.3e-104 383.6 292 67.8
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 2.9e-104 382.5 240 80.4
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 6.6e-104 381.3 240 80.0
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 9.5e-103 377.5 303 66.7
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 4.7e-102 375.2 296 68.9
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 1.4e-101 373.6 298 68.8
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 1.8e-101 373.2 285 71.2
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 1.8e-101 373.2 299 66.9
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 6.8e-101 371.3 293 69.6
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 4.4e-100 368.6 239 77.8
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 5.7e-100 368.2 287 67.9
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 6.4e-99 364.8 291 67.7
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 8.3e-99 364.4 274 70.1
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 1.4e-98 363.6 293 65.9
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 2.4e-98 362.8 288 67.0
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 4.1e-98 362.1 296 66.6
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 4.1e-98 362.1 281 70.1
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 5.4e-98 361.7 287 67.2
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 7.0e-98 361.3 291 67.0
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 7.0e-98 361.3 249 73.1
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 9.2e-98 360.9 299 66.6
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 1.0e-96 357.5 249 75.5
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.3e-96 357.1 254 73.6
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 1.3e-96 357.1 279 68.1
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 1.7e-96 356.7 244 73.4
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 1.7e-96 356.7 286 65.4
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 3.0e-96 355.9 288 66.3
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 3.0e-96 355.9 281 68.7
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 8.6e-96 354.4 270 68.5
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 8.6e-96 354.4 268 69.4
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 1.5e-95 353.6 275 68.0
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 4.3e-95 352.1 279 67.0
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 3.6e-94 349.0 241 73.9
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 3.6e-94 349.0 250 74.8
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 1.8e-93 346.7 297 64.3
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 5.2e-93 345.1 286 65.7
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 6.8e-93 344.7 247 69.6
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 8.9e-93 344.4 259 69.9
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 4.4e-92 342.0 287 63.4
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 5.8e-92 341.7 303 63.4
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 5.8e-92 341.7 294 66.0
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 9.8e-92 340.9 249 73.5
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 1.3e-91 340.5 301 61.8
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 1.3e-91 340.5 239 72.8
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.2e-91 339.7 240 74.6
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.9e-91 339.3 294 65.6
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 8.3e-91 337.8 297 63.6
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 1.9e-90 336.7 272 67.3
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 3.2e-90 335.9 275 64.7
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 5.4e-90 335.1 262 67.2
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 5.4e-90 335.1 285 64.6
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 7.0e-90 334.7 242 72.3
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 9.2e-90 334.3 263 67.3
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 1.2e-89 334.0 277 63.5
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.6e-89 333.6 254 68.5
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.6e-89 333.6 254 68.5
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 2.7e-89 332.8 275 63.3
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 4.6e-89 332.0 278 65.8
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 6.6e-88 328.2 246 69.9
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 1.1e-87 327.4 241 70.5
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.1e-87 327.4 293 63.5
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 3.3e-87 325.9 236 69.5
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 2.8e-86 322.8 301 59.5
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 4.7e-86 322.0 269 64.3
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 8.1e-86 321.2 281 61.2
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.1e-85 320.9 271 65.3
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 5.2e-85 318.5 258 65.1
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 6.8e-85 318.2 242 67.8
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 3.4e-84 315.8 255 63.5
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 7.1e-82 308.1 266 62.0
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 2.1e-81 306.6 233 67.8
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 7.8e-81 304.7 202 78.7
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 6.6e-80 301.6 255 63.5
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 6.6e-80 301.6 220 69.1
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 5.6e-79 298.5 208 72.6
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 5.6e-79 298.5 265 59.2
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 2.7e-73 279.6 222 66.2
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 6.0e-73 278.5 292 54.5
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 3.3e-71 272.7 244 63.1
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 2.8e-70 269.6 192 72.4
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 2.8e-70 269.6 196 69.9
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 1.1e-69 267.7 186 72.6
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 5.2e-69 265.4 248 57.3
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 1.3e-59 234.2 230 52.2
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 1.4e-58 230.7 232 53.9
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 4.9e-51 205.7 294 47.3
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 3.9e-48 196.1 227 44.5
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 4.3e-47 192.6 143 68.5
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 1.2e-41 174.5 237 41.4
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 9.6e-39 164.9 230 37.8
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 5.0e-35 152.5 244 38.1
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 3.9e-32 142.9 287 37.6
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.9e-31 140.6 93 73.1
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 3.1e-29 133.3 150 53.3
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.4e-21 107.8 84 64.3
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 5.9e-20 102.4 128 44.5
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 8.8e-16 88.6 54 77.8
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.2e-12 78.2 103 49.5
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 4.5e-12 76.3 80 48.8
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 6.5e-11 72.4 61 65.6
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 9.4e-10 68.6 70 58.6
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 9.4e-10 68.6 70 58.6
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 2.7e-09 67.0 70 57.1
Rhsim12G0083500 Rhododendron simsii HOM05D002858 ORTHO05D001695 8.2e-06 55.5 101 40.6


User provided reference genes

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