Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G191500 Populus trichocarpa HOM05D004965 ORTHO05D004401 6.9e-51 203.8 108 100.0
Potri.010G039800 Populus trichocarpa HOM05D004965 ORTHO05D004401 1.1e-29 133.3 108 69.4
Sabra10G0027200 Salix brachista HOM05D004965 ORTHO05D004401 1.0e-22 110.2 97 63.9
Sabra08G0145000 Salix brachista HOM05D004965 ORTHO05D004401 8.8e-22 107.1 84 77.4
Manes.05G094200 Manihot esculenta HOM05D004965 ORTHO05D004401 1.7e-20 102.8 104 53.8
Ciclev10033175m.g Citrus clementina HOM05D004965 ORTHO05D004401 1.7e-17 92.8 101 54.5
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 4.2e-16 88.2 104 56.7
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 3.9e-14 81.6 116 49.1
Prupe.1G263100 Prunus persica HOM05D004965 ORTHO05D004401 1.1e-13 80.1 110 44.5
Manes.01G193600 Manihot esculenta HOM05D004965 ORTHO05D004401 1.5e-13 79.7 99 47.5
MD16G1082900 Malus domestica HOM05D004965 ORTHO05D004401 2.0e-13 79.3 109 48.6
Duzib251G0216 Durio zibethinus HOM05D004965 ORTHO05D004401 5.7e-13 77.8 114 47.4
Glyma.02G025700 Glycine max HOM05D004965 ORTHO05D004401 9.7e-13 77.0 92 53.3
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 9.7e-13 77.0 108 50.9
GSVIVG01020127001 Vitis vinifera HOM05D004965 ORTHO05D004401 1.3e-12 76.6 104 51.0
CiPaw.05G143500 Carya illinoinensis HOM05D004965 ORTHO05D004401 1.7e-12 76.3 114 46.5
Glyma.01G038900 Glycine max HOM05D004965 ORTHO05D004401 1.7e-12 76.3 94 51.1
CSS0043755 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 3.7e-12 75.1 108 50.0
CiPaw.06G078100 Carya illinoinensis HOM05D004965 ORTHO05D004401 3.7e-12 75.1 112 53.6
Lalb_Chr16g0382641 Lupinus albus HOM05D004965 ORTHO05D004401 4.8e-12 74.7 100 49.0
Atru.chr11.1915 Acer truncatum HOM05D004965 ORTHO05D004401 8.2e-12 73.9 55 67.3
Lj2g0004313 Lotus japonicus HOM05D004965 ORTHO05D004401 8.2e-12 73.9 106 43.4
RcHm_v2.0_Chr4g0445011 Rosa chinensis HOM05D004965 ORTHO05D004401 8.2e-12 73.9 124 46.0
Lalb_Chr05g0217401 Lupinus albus HOM05D004965 ORTHO05D004401 1.4e-11 73.2 110 48.2
Nn3g17067 Nelumbo nucifera HOM05D004965 ORTHO05D004401 1.4e-11 73.2 105 47.6
Manes.15G177900 Manihot esculenta HOM05D004965 ORTHO05D004401 1.8e-11 72.8 104 44.2
Eucgr.B02578 Eucalyptus grandis HOM05D004965 ORTHO05D004401 3.1e-11 72.0 106 46.2
Actinidia12285 Actinidia chinensis HOM05D004965 ORTHO05D004401 4.1e-11 71.6 100 53.0
Lalb_Chr09g0326631 Lupinus albus HOM05D004965 ORTHO05D004401 5.3e-11 71.2 98 49.0
Duzib248G0243 Durio zibethinus HOM05D004965 ORTHO05D004401 7.0e-11 70.9 124 41.9
FAN22G1750 Fragaria x ananassa HOM05D004965 ORTHO05D004401 7.0e-11 70.9 119 45.4
MBI04_g09739_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 7.0e-11 70.9 51 66.7
FAN07G0801 Fragaria x ananassa HOM05D004965 ORTHO05D004401 9.1e-11 70.5 122 43.4
TWI75G1371 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 9.1e-11 70.5 113 43.4
Hund25308 Selenicereus undatus HOM05D004965 ORTHO05D004401 1.2e-10 70.1 98 46.9
TAR629G2889 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.2e-10 70.1 104 47.1
EL10Ac6g13083 Beta vulgaris HOM05D004965 ORTHO05D004401 1.6e-10 69.7 109 46.8
Cc11_g13890 Coffea canephora HOM05D004965 ORTHO05D004401 4.5e-10 68.2 108 46.3
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 7.7e-10 67.4 108 44.4
MD13G1083500 Malus domestica HOM05D004965 ORTHO05D004401 1.0e-09 67.0 109 46.8
Duzib268G0529 Durio zibethinus HOM05D004965 ORTHO05D004401 1.7e-09 66.2 107 45.8
FvH4_4g35400 Fragaria vesca HOM05D004965 ORTHO05D004401 3.8e-09 65.1 122 41.0
Gorai.002G165000 Gossypium raimondii HOM05D004965 ORTHO05D004401 3.8e-09 65.1 110 40.9
Sp5g25080 Schrenkiella parvula HOM05D010176 ORTHO05D012455 3.8e-09 65.1 107 44.9
TAR369G0013 Trochodendron aralioides HOM05D004965 ORTHO05D004401 5.0e-09 64.7 108 45.4
ClCG08G009090 Citrullus lanatus HOM05D004965 ORTHO05D004401 6.5e-09 64.3 45 73.3
Nn4g22977 Nelumbo nucifera HOM05D004965 ORTHO05D004401 6.5e-09 64.3 108 41.7
Phvul.002G079000 Phaseolus vulgaris HOM05D004965 ORTHO05D004401 6.5e-09 64.3 86 46.5
FAN12G3850 Fragaria x ananassa HOM05D004965 ORTHO05D004401 8.5e-09 63.9 103 44.7
MELO3C026507.2 Cucumis melo HOM05D004965 ORTHO05D004401 1.1e-08 63.5 47 66.0
CSS0011493 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 1.5e-08 63.2 85 48.2
Gohir.A01G142000 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.5e-08 63.2 109 40.4
CANSAT01G1612 Cannabis sativa HOM05D004965 ORTHO05D004401 1.9e-08 62.8 118 39.8
CsaV3_6G036050 Cucumis sativus L. HOM05D004965 ORTHO05D004401 1.9e-08 62.8 42 73.8
AT1G69970 Arabidopsis thaliana HOM05D010176 ORTHO05D012455 2.5e-08 62.4 103 40.8
Thhalv10019352m.g Eutrema salsugineum HOM05D010176 ORTHO05D012455 2.5e-08 62.4 101 40.6
TWI36G1686 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 2.5e-08 62.4 116 38.8
Sed0010056 Sechium edule HOM05D031204 ORTHO05D004401 3.2e-08 62.0 114 43.9
Aqoxy3G03187 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 4.2e-08 61.6 105 42.9
Dinv31145 Davidia involucrata HOM05D004965 ORTHO05D004401 4.2e-08 61.6 104 46.2
AL2G29210 Arabidopsis lyrata HOM05D010176 ORTHO05D012455 5.5e-08 61.2 102 42.2
Carub.0002s1667 Capsella rubella HOM05D010176 ORTHO05D012455 5.5e-08 61.2 113 37.2
CARHR063070 Cardamine hirsuta HOM05D010176 ORTHO05D012455 5.5e-08 61.2 103 40.8
CiPaw.04G021200 Carya illinoinensis HOM05D004965 ORTHO05D004401 5.5e-08 61.2 98 42.9
Gohir.A03G144700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 5.5e-08 61.2 45 71.1
MBI01_g13075_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 5.5e-08 61.2 108 41.7
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 7.2e-08 60.8 108 38.0
TAR622G1192 Trochodendron aralioides HOM05D004965 ORTHO05D004401 7.2e-08 60.8 95 45.3
CiPaw.03G032200 Carya illinoinensis HOM05D004965 ORTHO05D004401 9.4e-08 60.5 98 43.9
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 9.4e-08 60.5 108 40.7
PGR119G0489 Punica granatum HOM05D004965 ORTHO05D004401 9.4e-08 60.5 108 41.7
DCAR_026576 Daucus carota HOM05D004965 ORTHO05D004401 1.6e-07 59.7 97 41.2
Duzib187G0871 Durio zibethinus HOM05D004965 ORTHO05D004401 1.6e-07 59.7 52 55.8
MSTRG.2369 Avicennia marina HOM05D004965 ORTHO05D004401 2.1e-07 59.3 102 44.1
Dinv33690 Davidia involucrata HOM05D004965 ORTHO05D004401 2.1e-07 59.3 112 45.5
Gohir.D02G167800 Gossypium hirsutum HOM05D004965 ORTHO05D004401 2.1e-07 59.3 45 66.7
Gorai.005G188200 Gossypium raimondii HOM05D004965 ORTHO05D004401 2.1e-07 59.3 45 66.7
Lsat_1_v5_gn_8_161261 Lactuca sativa HOM05D004965 ORTHO05D004401 3.6e-07 58.5 31 87.1
Actinidia06052 Actinidia chinensis HOM05D004965 ORTHO05D004401 4.7e-07 58.2 107 42.1
Aqoxy3G00848 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 4.7e-07 58.2 107 43.0
Gohir.D01G133500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 4.7e-07 58.2 110 40.9
HanXRQChr08g0209111 Helianthus annuus HOM05D004965 ORTHO05D004401 4.7e-07 58.2 29 89.7
Haze_14606 Corylus avellana HOM05D004965 ORTHO05D004401 8.0e-07 57.4 98 41.8
SalBow8G5011 Salvia bowleyana HOM05D004965 ORTHO05D004401 1.4e-06 56.6 95 40.0
TWI36G1294 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 1.4e-06 56.6 103 44.7
ATR0665G516 Amborella trichopoda HOM05D004965 ORTHO05D004401 1.8e-06 56.2 59 55.9
arahy.Tifrunner.gnm1.ann1.0GIF91 Arachis hypogaea HOM05D004965 ORTHO05D004401 1.8e-06 56.2 34 79.4
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 1.8e-06 56.2 48 60.4
vmacro16304 Vaccinium macrocarpon HOM05D004965 ORTHO05D004401 1.8e-06 56.2 98 38.8
BcaC08g46447 Brassica carinata HOM05D010176 ORTHO05D012455 2.3e-06 55.8 107 40.2
BcaB05g24507 Brassica carinata HOM05D010176 ORTHO05D012455 3.0e-06 55.5 34 73.5
PGSC0003DMG400022630 Solanum tuberosum HOM05D004965 ORTHO05D004401 3.0e-06 55.5 103 41.7
A07p36420 Brassica napus HOM05D010176 ORTHO05D012455 4.0e-06 55.1 107 40.2
QL02p079418 Quercus lobata HOM05D004965 ORTHO05D004401 4.0e-06 55.1 97 39.2
CSS0014777 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 5.2e-06 54.7 97 42.3
Psat2g116360 Pisum sativum HOM05D004965 ORTHO05D004401 5.2e-06 54.7 97 41.2
BcaC08g45847 Brassica carinata HOM05D010176 ORTHO05D012455 6.7e-06 54.3 107 40.2
Cpa.g.sc5.310 Carica papaya HOM05D004965 ORTHO05D004401 8.8e-06 53.9 73 46.6
CsaV3_5G037710 Cucumis sativus L. HOM05D004965 ORTHO05D004401 8.8e-06 53.9 48 58.3
Sc04g0008760 Simmondsia chinensis HOM05D004965 ORTHO05D004401 8.8e-06 53.9 37 67.6
PGSC0003DMG400004191 Solanum tuberosum HOM05D004965 ORTHO05D004401 8.8e-06 53.9 96 38.5
TWI56G0241 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 8.8e-06 53.9 110 40.0


User provided reference genes

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