Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G178951 Populus trichocarpa HOM05D005422 ORTHO05D006578 1.8e-66 255.8 125 100.0
Sabra10G0049200 Salix brachista HOM05D005422 ORTHO05D006578 2.0e-46 189.1 124 79.0
Potri.010G055900 Populus trichocarpa HOM05D005422 ORTHO05D006578 3.5e-46 188.3 124 78.2
Manes.12G015200 Manihot esculenta HOM05D005422 ORTHO05D006578 2.0e-41 172.6 123 71.5
Atru.chr11.2241 Acer truncatum HOM05D005422 ORTHO05D006578 2.3e-34 149.1 125 61.6
Atru.chr11.2256 Acer truncatum HOM05D005422 ORTHO05D006578 3.4e-33 145.2 125 60.0
Ciclev10030973m.g Citrus clementina HOM05D005422 ORTHO05D006578 3.4e-33 145.2 123 61.8
Cfa009312 Carpinus fangiana HOM05D005422 ORTHO05D006578 1.3e-29 133.3 123 55.3
Haze_12366 Corylus avellana HOM05D005422 ORTHO05D006578 1.3e-29 133.3 123 55.3
GSVIVG01010354001 Vitis vinifera HOM05D005422 ORTHO05D006578 1.7e-29 132.9 123 52.8
MD16G1111400 Malus domestica HOM05D005422 ORTHO05D006578 5.0e-29 131.3 123 56.1
CANSAT01G0865 Cannabis sativa HOM05D005422 ORTHO05D006578 8.6e-29 130.6 123 53.7
QL03p054803 Quercus lobata HOM05D005422 ORTHO05D006578 5.6e-28 127.9 123 53.7
Cpa.g.sc43.8 Carica papaya HOM05D005422 ORTHO05D006578 9.5e-28 127.1 123 56.9
THA.LOC104807895 Tarenaya hassleriana HOM05D005422 ORTHO05D006578 3.6e-27 125.2 125 56.8
Thecc.02G273900 Theobroma cacao HOM05D005422 ORTHO05D006578 6.8e-26 120.9 123 54.5
MELO3C002044.2 Cucumis melo HOM05D005422 ORTHO05D006578 1.2e-25 120.2 123 52.0
Sp5g22630 Schrenkiella parvula HOM05D005422 ORTHO05D006578 2.0e-25 119.4 124 50.8
MD13G1111800 Malus domestica HOM05D005422 ORTHO05D006578 2.6e-25 119.0 123 52.0
Hund25438 Selenicereus undatus HOM05D005422 ORTHO05D006578 2.6e-25 119.0 124 50.8
CiPaw.06G099500 Carya illinoinensis HOM05D005422 ORTHO05D006578 4.4e-25 118.2 123 50.4
FAN07G0746 Fragaria x ananassa HOM05D005422 ORTHO05D000550 4.4e-25 118.2 125 52.0
A02p14390 Brassica napus HOM05D005422 ORTHO05D006578 1.3e-24 116.7 121 51.2
C02p23270 Brassica napus HOM05D005422 ORTHO05D006578 1.3e-24 116.7 124 52.4
BolC2t08466H Brassica oleracea HOM05D005422 ORTHO05D006578 1.3e-24 116.7 124 51.6
CsaV3_1G006150 Cucumis sativus L. HOM05D005422 ORTHO05D006578 1.3e-24 116.7 127 52.0
BcaC03g14856 Brassica carinata HOM05D005422 ORTHO05D006578 2.2e-24 115.9 124 51.6
FAN17G0355 Fragaria x ananassa HOM05D005422 ORTHO05D006578 4.9e-24 114.8 125 50.4
FvH4_4g24380 Fragaria vesca HOM05D005422 ORTHO05D006578 6.4e-24 114.4 125 50.4
FAN12G3101 Fragaria x ananassa HOM05D005422 ORTHO05D006578 6.4e-24 114.4 125 50.4
BcaB05g24303 Brassica carinata HOM05D005422 ORTHO05D006578 8.3e-24 114.0 124 51.6
BraA02t06501Z Brassica rapa HOM05D005422 ORTHO05D006578 1.4e-23 113.2 124 50.0
ClCG04G011650 Citrullus lanatus HOM05D005422 ORTHO05D006578 1.4e-23 113.2 123 50.4
Dinv14796 Davidia involucrata HOM05D005422 ORTHO05D006578 1.4e-23 113.2 123 52.0
Gohir.D05G312350 Gossypium hirsutum HOM05D005422 ORTHO05D006578 1.4e-23 113.2 123 52.0
Gorai.009G333700 Gossypium raimondii HOM05D005422 ORTHO05D006578 1.4e-23 113.2 123 52.0
Eucgr.B03458 Eucalyptus grandis HOM05D005422 ORTHO05D006578 2.4e-23 112.5 126 51.6
Thhalv10018287m.g Eutrema salsugineum HOM05D005422 ORTHO05D006578 3.2e-23 112.1 125 49.6
PGR102G2427 Punica granatum HOM05D005422 ORTHO05D006578 3.2e-23 112.1 123 48.8
COL.COLO4_23617 Corchorus olitorius HOM05D005422 ORTHO05D006578 5.4e-23 111.3 124 51.6
FAN22G2139 Fragaria x ananassa HOM05D005422 ORTHO05D000550 5.4e-23 111.3 125 49.6
CSS0043806 Camellia sinensis var. sinensis HOM05D005422 ORTHO05D006578 7.0e-23 110.9 123 51.2
AL2G26300 Arabidopsis lyrata HOM05D005422 ORTHO05D006578 1.2e-22 110.2 124 50.0
CSS0029300 Camellia sinensis var. sinensis HOM05D005422 ORTHO05D006578 1.2e-22 110.2 123 51.2
AT1G67630 Arabidopsis thaliana HOM05D005422 ORTHO05D006578 1.6e-22 109.8 124 49.2
Actinidia33261 Actinidia chinensis HOM05D005422 ORTHO05D006578 2.0e-22 109.4 123 50.4
Gohir.A05G311350 Gossypium hirsutum HOM05D005422 ORTHO05D006578 2.0e-22 109.4 123 51.2
Sc11g0000670 Simmondsia chinensis HOM05D005422 ORTHO05D006578 2.7e-22 109.0 125 49.6
Sed0011369 Sechium edule HOM05D005422 ORTHO05D006578 4.6e-22 108.2 123 48.8
RcHm_v2.0_Chr4g0431221 Rosa chinensis HOM05D005422 ORTHO05D006578 7.8e-22 107.5 125 49.6
Prupe.1G233700 Prunus persica HOM05D005422 ORTHO05D006578 1.0e-21 107.1 127 48.8
Carub.0002s1397 Capsella rubella HOM05D005422 ORTHO05D006578 1.3e-21 106.7 124 48.4
Nn3g16548 Nelumbo nucifera HOM05D005422 ORTHO05D006578 1.3e-21 106.7 128 50.8
Rhsim12G0105700 Rhododendron simsii HOM05D005422 ORTHO05D006578 1.3e-21 106.7 123 49.6
vmacro16136 Vaccinium macrocarpon HOM05D005422 ORTHO05D006578 1.3e-21 106.7 123 48.8
Aa31LG4G12020 Aethionema arabicum HOM05D005422 ORTHO05D006578 3.0e-21 105.5 123 51.2
Ca_16485_v3 Cicer arietinum L. HOM05D005422 ORTHO05D006578 3.9e-21 105.1 119 45.4
Hma1.2p1_1340F.1_g276720 Hydrangea macrophylla HOM05D005422 ORTHO05D006578 3.9e-21 105.1 123 49.6
CARHR060210 Cardamine hirsuta HOM05D005422 ORTHO05D006578 6.6e-21 104.4 120 52.5
DCAR_013710 Daucus carota HOM05D005422 ORTHO05D006578 8.6e-21 104.0 123 47.2
TAR374G0226 Trochodendron aralioides HOM05D005422 ORTHO05D006578 8.6e-21 104.0 126 50.8
TPR.G22445 Trifolium pratense HOM05D005422 ORTHO05D006578 4.3e-20 101.7 119 47.1
C02p23310 Brassica napus HOM05D005422 ORTHO05D006578 5.6e-20 101.3 110 51.8
arahy.Tifrunner.gnm1.ann1.3L5TD6 Arachis hypogaea HOM05D005422 ORTHO05D006578 7.3e-20 100.9 123 44.7
arahy.Tifrunner.gnm1.ann1.FGLE2H Arachis hypogaea HOM05D005422 ORTHO05D006578 7.3e-20 100.9 123 44.7
arahy.Tifrunner.gnm1.ann1.T7I6MJ Arachis hypogaea HOM05D005422 ORTHO05D006578 7.3e-20 100.9 123 44.7
DCAR_024084 Daucus carota HOM05D005422 ORTHO05D006578 7.3e-20 100.9 123 46.3
Medtr3g085750 Medicago truncatula HOM05D005422 ORTHO05D006578 9.5e-20 100.5 119 44.5
PSO782G4908 Papaver somniferum HOM05D005422 ORTHO05D006578 9.5e-20 100.5 123 42.3
EL10Ac6g13434 Beta vulgaris HOM05D005422 ORTHO05D006578 1.2e-19 100.1 124 47.6
PSO063G3748 Papaver somniferum HOM05D005422 ORTHO05D006578 1.2e-19 100.1 123 42.3
Lj6C821T7 Lonicera japonica HOM05D005422 ORTHO05D006578 2.1e-19 99.4 123 45.5
Lj6g0001538 Lotus japonicus HOM05D005422 ORTHO05D006578 2.1e-19 99.4 119 45.4
AUR62005568 Chenopodium quinoa HOM05D005422 ORTHO05D006578 3.6e-19 98.6 129 46.5
Lj6g0021706 Lotus japonicus HOM05D005422 ORTHO05D006578 4.7e-19 98.2 119 46.2
Psat5g094440 Pisum sativum HOM05D005422 ORTHO05D006578 4.7e-19 98.2 119 44.5
Aqoxy5G03525 Aquilegia oxysepala HOM05D005422 ORTHO05D006578 1.4e-18 96.7 127 44.1
Oeu056686.1 Olea europaea HOM05D005422 ORTHO05D006578 1.4e-18 96.7 123 43.1
Peaxi162Scf00128g00843 Petunia axillaris HOM05D005422 ORTHO05D006578 6.8e-18 94.4 123 44.7
Glyma.11G247900 Glycine max HOM05D005422 ORTHO05D006578 1.5e-17 93.2 127 45.7
AUR62024162 Chenopodium quinoa HOM05D005422 ORTHO05D006578 2.0e-17 92.8 124 45.2
Lalb_Chr04g0262801 Lupinus albus HOM05D005422 ORTHO05D006578 4.4e-17 91.7 126 42.9
Glyma.18G009300 Glycine max HOM05D005422 ORTHO05D006578 9.8e-17 90.5 117 48.7
Nitab4.5_0000240g0030 Nicotiana tabacum HOM05D005422 ORTHO05D006578 2.9e-16 89.0 123 43.1
Cc11_g16560 Coffea canephora HOM05D005422 ORTHO05D006578 3.7e-16 88.6 127 44.1
Phvul.001G259300 Phaseolus vulgaris HOM05D005422 ORTHO05D006578 3.7e-16 88.6 130 41.5
Nitab4.5_0000581g0110 Nicotiana tabacum HOM05D005422 ORTHO05D006578 8.3e-16 87.4 123 43.1
VMungo1383G2526 Vigna mungo HOM05D005422 ORTHO05D006578 1.1e-15 87.0 130 44.6
Duzib268G1013 Durio zibethinus HOM05D005422 ORTHO05D006578 1.9e-15 86.3 129 43.4
HanXRQChr06g0174981 Helianthus annuus HOM05D005422 ORTHO05D006578 3.2e-15 85.5 123 40.7
Lsat_1_v5_gn_3_29520 Lactuca sativa HOM05D005422 ORTHO05D006578 4.6e-14 81.6 123 42.3
CAN.G163.4 Capsicum annuum HOM05D005422 ORTHO05D006578 1.0e-13 80.5 123 39.8
ECA246G0814 Erigeron canadensis HOM05D005422 ORTHO05D006578 1.0e-13 80.5 123 39.0
PGSC0003DMG400017439 Solanum tuberosum HOM05D005422 ORTHO05D006578 1.0e-13 80.5 123 41.5
Solyc05g014540.3 Solanum lycopersicum HOM05D005422 ORTHO05D006578 8.6e-13 77.4 123 39.8
Sopen05g009590 Solanum pennellii HOM05D005422 ORTHO05D006578 8.6e-13 77.4 123 39.8
MSTRG.7977 Avicennia marina HOM05D005422 ORTHO05D006578 1.1e-10 70.5 123 39.8
ATR0743G050 Amborella trichopoda HOM05D005422 ORTHO05D006578 2.0e-09 66.2 132 31.1
HPP92_024300 Vanilla planifolia HOM05D005422 ORTHO05D006578 9.9e-09 63.9 126 32.5
SEGI_15215 Sequoiadendron giganteum HOM05D005422 ORTHO05D006578 2.9e-08 62.4 137 30.7
SEGI_16764 Sequoiadendron giganteum HOM05D005422 ORTHO05D006578 2.9e-08 62.4 137 30.7
SEGI_31313 Sequoiadendron giganteum HOM05D005422 ORTHO05D006578 2.9e-08 62.4 137 30.7
SHI17936 Sapria himalayana HOM05D005422 ORTHO05D006578 7.1e-07 57.8 94 40.4
HPP92_024297 Vanilla planifolia HOM05D005422 ORTHO05D006578 3.5e-06 55.5 50 52.0


User provided reference genes

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