Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 3.2e-185 651.7 360 100.0
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 5.0e-122 441.8 351 70.9
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 1.9e-121 439.9 351 69.5
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 3.4e-86 322.8 198 81.8
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 3.2e-52 209.9 365 37.0
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 2.5e-49 200.3 381 37.0
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 3.1e-47 193.4 225 47.1
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 6.9e-47 192.2 234 47.4
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 2.1e-43 180.6 326 39.6
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 2.7e-43 180.3 234 45.7
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 2.7e-43 180.3 234 45.7
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 4.6e-43 179.5 190 53.7
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 6.1e-43 179.1 223 46.2
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 5.7e-41 172.6 350 35.1
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 7.4e-41 172.2 222 46.4
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 3.7e-40 169.9 221 43.4
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 3.7e-40 169.9 375 33.9
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 4.8e-40 169.5 353 35.7
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 9.0e-39 165.2 262 40.1
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 2.6e-38 163.7 219 42.5
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 3.4e-38 163.3 225 40.0
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 4.2e-36 156.4 178 46.6
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 2.1e-35 154.1 190 45.3
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 2.7e-35 153.7 218 39.0
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 6.1e-35 152.5 222 42.3
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 6.1e-35 152.5 188 44.7
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 7.9e-35 152.1 188 44.7
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 3.0e-34 150.2 287 38.0
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 6.7e-34 149.1 176 49.4
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 8.8e-34 148.7 237 36.3
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.5e-33 147.9 173 48.6
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 2.5e-33 147.1 176 49.4
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 3.3e-33 146.7 232 40.9
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 3.3e-33 146.7 163 48.5
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 4.3e-33 146.4 206 42.2
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 4.3e-33 146.4 165 47.3
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 5.7e-33 146.0 352 30.4
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 1.3e-32 144.8 186 44.6
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 3.7e-32 143.3 183 41.5
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 1.4e-31 141.4 168 41.7
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 1.8e-31 141.0 158 47.5
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 2.4e-31 140.6 223 40.4
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 5.3e-31 139.4 246 38.2
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 6.9e-31 139.0 170 44.7
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 9.1e-31 138.7 196 39.8
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 9.1e-31 138.7 232 37.1
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 2.6e-30 137.1 158 47.5
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 2.6e-30 137.1 158 47.5
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 4.5e-30 136.3 171 44.4
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 2.2e-29 134.0 233 36.1
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 2.9e-29 133.7 188 41.5
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 2.9e-29 133.7 259 35.1
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 5.0e-29 132.9 173 45.1
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 6.5e-29 132.5 349 29.5
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.1e-28 131.7 173 45.1
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.1e-28 131.7 173 45.1
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 3.2e-28 130.2 201 41.3
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 1.4e-26 124.8 175 39.4
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 1.4e-26 124.8 170 45.3
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 5.1e-26 122.9 216 36.6
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 1.1e-25 121.7 374 29.1
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 1.1e-25 121.7 146 44.5
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 9.7e-25 118.6 179 38.5
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 2.8e-24 117.1 136 43.4
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 7.0e-23 112.5 202 36.6
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 1.2e-22 111.7 163 39.9
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 1.6e-22 111.3 166 38.0
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 4.5e-22 109.8 159 42.8
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 5.9e-22 109.4 153 40.5
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 1.0e-21 108.6 161 36.0
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 2.9e-21 107.1 194 35.6
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 1.1e-20 105.1 162 40.1
Nitab4.5_0000146g0080 Nicotiana tabacum HOM05D007857 ORTHO05D009355 1.1e-20 105.1 102 46.1
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 3.2e-20 103.6 311 28.3
BolC2t08453H Brassica oleracea HOM05D010720 ORTHO05D009355 2.7e-19 100.5 185 33.0
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 3.6e-19 100.1 169 39.1
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 3.6e-19 100.1 160 39.4
BcaC03g14845 Brassica carinata HOM05D010720 ORTHO05D009355 8.0e-19 99.0 188 31.4
C02p23110 Brassica napus HOM05D010720 ORTHO05D009355 5.2e-18 96.3 188 30.9
A02p14300 Brassica napus HOM05D010720 ORTHO05D009355 2.6e-17 94.0 188 30.3
BraA02t06491Z Brassica rapa HOM05D010720 ORTHO05D009355 2.6e-17 94.0 188 30.3
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 3.3e-17 93.6 185 32.4
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 5.7e-17 92.8 158 34.8
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 2.8e-16 90.5 312 28.5
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 3.7e-16 90.1 164 36.0
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 1.8e-15 87.8 120 38.3
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 1.8e-15 87.8 161 34.8
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 1.8e-15 87.8 162 35.8
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 1.8e-15 87.8 162 35.8
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 2.4e-15 87.4 161 34.8
Thhalv10019017m.g Eutrema salsugineum HOM05D010720 ORTHO05D009355 9.1e-15 85.5 194 33.5
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 1.2e-14 85.1 161 33.5
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 2.7e-14 84.0 113 44.2
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 4.5e-14 83.2 187 31.6
Sp5g22550 Schrenkiella parvula HOM05D010720 ORTHO05D009355 1.3e-13 81.6 138 37.0
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 2.2e-13 80.9 150 36.0
Lj6E824T1 Lonicera japonica HOM05D007857 ORTHO05D009355 2.6e-09 67.4 77 44.2
Lsat_1_v5_gn_8_149921 Lactuca sativa HOM05D007857 ORTHO05D009355 9.1e-07 58.9 116 34.5


User provided reference genes

Program Settings