Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 8.9e-164 580.1 272 100.0
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 6.2e-125 451.1 243 84.8
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 1.4e-113 413.3 250 79.6
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 8.8e-103 377.5 213 78.9
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 1.1e-97 360.5 209 75.1
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 2.5e-97 359.4 208 76.0
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 5.5e-97 358.2 207 75.8
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 3.6e-96 355.5 270 64.1
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.4e-95 353.6 208 74.5
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 3.0e-95 352.4 207 75.8
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 1.5e-94 350.1 249 63.9
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 9.7e-94 347.4 232 67.7
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.7e-93 346.7 214 72.9
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 8.2e-93 344.4 237 65.8
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 3.1e-92 342.4 219 72.6
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 4.5e-91 338.6 217 71.4
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 1.3e-90 337.0 219 70.3
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 1.1e-89 334.0 211 70.1
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 4.2e-89 332.0 254 63.8
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 4.7e-88 328.6 231 64.9
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 2.6e-86 322.8 242 62.0
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 9.7e-86 320.9 234 63.2
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 1.3e-85 320.5 227 64.3
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 1.7e-85 320.1 231 64.5
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.7e-85 320.1 211 69.2
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 3.7e-85 318.9 236 64.0
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 1.1e-84 317.4 226 64.2
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 1.4e-84 317.0 214 65.9
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 2.4e-84 316.2 215 65.1
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 4.1e-84 315.5 208 64.9
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 1.3e-82 310.5 226 63.7
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.3e-82 310.5 205 66.8
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 2.2e-82 309.7 228 60.5
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 4.2e-81 305.4 209 63.2
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 7.2e-81 304.7 200 67.5
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 9.4e-81 304.3 230 63.0
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 1.6e-80 303.5 201 66.2
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 1.8e-79 300.1 203 65.5
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 2.6e-78 296.2 170 75.9
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 2.6e-78 296.2 208 61.1
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 4.4e-78 295.4 254 54.3
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 1.4e-76 290.4 244 57.8
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 1.6e-75 287.0 202 64.4
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 6.5e-74 281.6 245 56.3
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 1.6e-72 276.9 255 54.5
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 1.5e-65 253.8 176 59.7
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 9.5e-65 251.1 229 53.3
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 9.2e-60 234.6 167 63.5
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 4.6e-59 232.3 204 52.5
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 5.9e-59 231.9 141 73.8
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 1.0e-58 231.1 125 78.4
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 3.9e-58 229.2 124 76.6
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.5e-57 227.3 250 43.2
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 1.7e-53 213.8 224 48.7
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 4.9e-53 212.2 130 67.7
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.1e-52 211.1 226 44.2
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 1.9e-52 210.3 171 56.7
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 7.8e-51 204.9 124 73.4
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 1.3e-50 204.1 120 73.3
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 3.0e-50 203.0 128 65.6
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 1.4e-47 194.1 113 71.7
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 1.8e-47 193.7 103 76.7
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 5.2e-47 192.2 126 62.7
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 8.3e-45 184.9 106 73.6
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 2.1e-43 180.3 118 66.9
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 3.0e-42 176.4 196 41.3
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 2.8e-40 169.9 163 46.0
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 1.4e-39 167.5 219 40.6
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 8.9e-39 164.9 100 68.0
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 2.0e-38 163.7 100 69.0
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 8.4e-37 158.3 86 79.1
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 2.4e-36 156.8 104 62.5
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 3.2e-36 156.4 103 61.2
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 1.2e-35 154.5 201 39.3
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 1.0e-34 151.4 129 57.4
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 1.3e-34 151.0 150 51.3
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 5.6e-33 145.6 192 37.5
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.2e-30 137.9 196 36.2
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 3.0e-26 123.2 125 55.2
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 8.7e-26 121.7 198 33.8
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 2.5e-25 120.2 73 69.9
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.3e-24 117.9 79 77.2
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 1.6e-24 117.5 111 47.7
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.2e-22 111.3 200 36.0
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.6e-16 90.9 127 40.9
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 3.4e-14 83.2 211 28.9
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 5.8e-14 82.4 62 62.9
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 6.7e-10 68.9 120 38.3
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.1e-09 68.2 75 49.3
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 7.4e-09 65.5 69 50.7
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 6.9e-07 58.9 64 48.4
FAN12G3210 Fragaria x ananassa HOM05D007543 ORTHO05D009555 9.0e-07 58.5 39 69.2
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 1.2e-06 58.2 100 41.0
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 3.4e-06 56.6 69 44.9
HPP92_022683 Vanilla planifolia HOM05D007543 ORTHO05D009555 3.4e-06 56.6 131 29.8
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 1.0e-05 55.1 75 42.7


User provided reference genes

Program Settings