Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 2.2e-91 339.0 170 100.0
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 7.0e-74 280.8 169 82.8
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 5.2e-69 264.6 167 78.4
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 1.3e-64 250.0 164 76.8
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 3.9e-48 195.3 167 60.5
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 1.8e-45 186.4 167 59.9
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 8.1e-38 161.0 176 55.7
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 7.5e-36 154.5 176 51.7
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 2.4e-34 149.4 180 50.6
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 1.6e-33 146.7 171 52.0
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 7.8e-33 144.4 179 50.3
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 1.9e-31 139.8 156 53.8
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 3.3e-31 139.0 171 45.6
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 1.2e-30 137.1 148 52.7
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 8.1e-30 134.4 170 49.4
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 3.1e-29 132.5 169 49.1
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 5.8e-28 128.3 166 45.8
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.3e-27 127.1 173 47.4
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.7e-27 126.7 173 47.4
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 1.1e-26 124.0 154 49.4
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 4.1e-26 122.1 183 42.6
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 3.5e-25 119.0 170 41.8
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 6.0e-25 118.2 168 45.2
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 6.0e-25 118.2 159 48.4
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 1.0e-24 117.5 159 47.8
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 2.3e-24 116.3 129 48.8
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 3.0e-24 115.9 171 44.4
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 3.3e-23 112.5 176 43.8
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 5.6e-23 111.7 180 42.2
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 1.2e-22 110.5 168 42.9
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 1.4e-21 107.1 127 48.8
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 1.4e-21 107.1 171 44.4
VMungo0720G2187 Vigna mungo HOM05D012468 ORTHO05D009575 1.4e-21 107.1 176 44.3
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 8.9e-21 104.4 92 60.9
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 2.6e-20 102.8 139 46.8
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 2.6e-20 102.8 169 41.4
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 2.6e-20 102.8 172 40.7
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 2.6e-20 102.8 170 42.4
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 7.6e-20 101.3 168 42.9
RcHm_v2.0_Chr4g0395401 Rosa chinensis HOM05D008157 ORTHO05D009575 7.6e-20 101.3 93 61.3
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 9.9e-20 100.9 133 44.4
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 9.9e-20 100.9 171 41.5
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 9.9e-20 100.9 171 41.5
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 7.8e-17 91.3 122 45.9
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 1.0e-16 90.9 130 46.2
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 1.7e-16 90.1 143 42.0
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 8.7e-16 87.8 140 40.7
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 4.3e-15 85.5 138 39.1
CiPaw.03G270400 Carya illinoinensis HOM05D014916 ORTHO05D009575 5.6e-15 85.1 171 38.6
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.3e-14 84.0 117 46.2
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 1.3e-14 84.0 128 43.8
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 1.3e-14 84.0 175 34.3
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.6e-14 83.6 130 39.2
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 3.6e-14 82.4 194 35.1
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 8.1e-14 81.3 116 40.5
Nitab4.5_0000194g0190 Nicotiana tabacum HOM05D008157 ORTHO05D009575 1.1e-13 80.9 128 42.2
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 1.1e-13 80.9 115 44.3
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 1.4e-13 80.5 170 37.6
FAN17G2184 Fragaria x ananassa HOM05D008157 ORTHO05D009575 6.9e-13 78.2 107 45.8
Psat6g131320 Pisum sativum HOM05D012468 ORTHO05D009575 9.0e-13 77.8 236 30.9
GSVIVG01027916001 Vitis vinifera HOM05D008157 ORTHO05D009575 9.0e-13 77.8 100 45.0
Medtr1g073260 Medicago truncatula HOM05D012468 ORTHO05D009575 2.6e-12 76.3 264 28.0
Ca_09800_v3 Cicer arietinum L. HOM05D012468 ORTHO05D009575 3.4e-12 75.9 230 30.4
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 4.5e-12 75.5 135 35.6
QL09p041310 Quercus lobata HOM05D014916 ORTHO05D009575 5.8e-12 75.1 135 39.3
arahy.Tifrunner.gnm1.ann1.U79AWX Arachis hypogaea HOM05D012468 ORTHO05D009575 1.7e-11 73.6 131 41.2
arahy.Tifrunner.gnm1.ann1.JW933S Arachis hypogaea HOM05D012468 ORTHO05D009575 2.9e-11 72.8 130 40.0
Solyc09g090710.3 Solanum lycopersicum HOM05D008157 ORTHO05D009575 1.9e-10 70.1 87 47.1
COL.COLO4_15964 Corchorus olitorius HOM05D008157 ORTHO05D009575 2.4e-10 69.7 130 40.8
Lalb_Chr06g0169531 Lupinus albus HOM05D012468 ORTHO05D009575 3.2e-10 69.3 151 36.4
Manes.12G036500 Manihot esculenta HOM05D014916 ORTHO05D009575 7.1e-10 68.2 130 37.7
Nitab4.5_0000194g0130 Nicotiana tabacum HOM05D008157 ORTHO05D009575 2.1e-09 66.6 83 49.4
AL7G32040 Arabidopsis lyrata HOM05D012000 ORTHO05D013959 4.6e-09 65.5 144 34.0
Prupe.8G216000 Prunus persica HOM05D017729 ORTHO05D022643 7.9e-09 64.7 170 34.1
FvH4_2g20360 Fragaria vesca HOM05D017729 ORTHO05D022643 2.3e-08 63.2 168 34.5
Potri.014G192701 Populus trichocarpa HOM05D008157 ORTHO05D009575 2.3e-08 63.2 160 34.4
Carub.0007s1951 Capsella rubella HOM05D012000 ORTHO05D013959 3.0e-08 62.8 137 36.5
Glyma.10G040300 Glycine max HOM05D016547 ORTHO05D009575 3.9e-08 62.4 130 35.4
Lsat_1_v5_gn_6_66080 Lactuca sativa HOM05D008157 ORTHO05D035152 5.1e-08 62.0 150 35.3
AT4G21865 Arabidopsis thaliana HOM05D012000 ORTHO05D013959 6.7e-08 61.6 144 34.0
Thhalv10026480m.g Eutrema salsugineum HOM05D012000 ORTHO05D013959 6.7e-08 61.6 137 34.3
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.9e-07 60.1 61 52.5
CDE01G0186 Ceratophyllum demersum HOM05D008157 ORTHO05D009575 1.9e-07 60.1 164 35.4
Migut.G00556 Erythranthe guttata HOM05D008157 ORTHO05D009575 1.9e-07 60.1 90 42.2
BcaB03g11715 Brassica carinata HOM05D012000 ORTHO05D013959 4.3e-07 58.9 118 39.0
Sp7g20010 Schrenkiella parvula HOM05D012000 ORTHO05D013959 5.6e-07 58.5 153 34.6
CARHR228620 Cardamine hirsuta HOM05D012000 ORTHO05D013959 7.4e-07 58.2 145 35.2
THA.LOC104808976 Tarenaya hassleriana HOM05D012000 ORTHO05D013959 7.4e-07 58.2 116 38.8
Aa31LG9G18080 Aethionema arabicum HOM05D012000 ORTHO05D013959 1.6e-06 57.0 137 31.4
Gohir.D07G158200 Gossypium hirsutum HOM05D014916 ORTHO05D009575 1.6e-06 57.0 126 36.5
Gorai.001G181400 Gossypium raimondii HOM05D014916 ORTHO05D009575 1.6e-06 57.0 126 36.5
AUR62018040 Chenopodium quinoa HOM05D008157 ORTHO05D009575 4.8e-06 55.5 70 50.0
Gohir.A07G152000 Gossypium hirsutum HOM05D014916 ORTHO05D009575 4.8e-06 55.5 191 33.0
BraA08t33526Z Brassica rapa HOM05D012000 ORTHO05D013959 6.2e-06 55.1 164 31.1


User provided reference genes

Program Settings