Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 8.9e-259 896.3 433 100.0
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 1.6e-236 822.4 432 93.1
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 8.6e-169 597.4 441 66.4
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 1.4e-166 590.1 422 69.9
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 1.4e-166 590.1 441 68.3
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 1.4e-166 590.1 440 66.6
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 6.8e-166 587.8 423 68.3
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 6.4e-164 581.3 437 66.6
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 9.2e-163 577.4 437 65.0
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 4.6e-162 575.1 435 66.0
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.3e-161 573.5 433 64.2
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 2.3e-161 572.8 438 65.1
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 3.0e-161 572.4 429 66.7
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 3.9e-161 572.0 440 64.3
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 3.3e-160 568.9 432 65.5
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 1.6e-159 566.6 436 64.4
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 3.6e-159 565.5 429 66.2
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 1.1e-158 563.9 443 63.0
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 1.4e-158 563.5 433 64.0
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 2.3e-158 562.8 439 62.9
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 9.8e-157 557.4 438 62.1
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.1e-155 553.9 431 62.4
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 1.4e-155 553.5 441 63.7
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 7.0e-155 551.2 444 61.5
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 1.2e-154 550.4 433 63.3
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 2.1e-154 549.7 438 62.8
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 2.7e-154 549.3 438 61.2
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 1.0e-153 547.4 441 61.9
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 1.0e-153 547.4 435 63.7
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 6.6e-153 544.7 433 64.0
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 1.1e-152 543.9 434 63.1
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 1.1e-152 543.9 403 68.0
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 3.3e-152 542.3 427 63.2
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 7.3e-152 541.2 436 63.3
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 1.4e-150 537.0 435 62.3
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 3.1e-150 535.8 440 58.9
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 4.0e-150 535.4 444 59.9
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 1.2e-149 533.9 438 60.5
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 1.5e-149 533.5 444 59.7
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 3.4e-149 532.3 438 60.3
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 3.7e-148 528.9 453 59.8
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 4.9e-148 528.5 426 62.9
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 3.2e-147 525.8 397 66.2
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 1.2e-146 523.9 409 63.6
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 1.2e-146 523.9 438 61.9
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 1.2e-146 523.9 438 61.9
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 3.5e-146 522.3 434 60.6
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 3.5e-146 522.3 426 61.7
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 2.5e-144 516.2 428 61.4
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 4.3e-144 515.4 440 58.9
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.2e-143 513.8 423 60.8
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 1.6e-143 513.5 428 61.2
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 1.4e-142 510.4 422 61.4
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 2.4e-142 509.6 440 58.4
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 4.0e-142 508.8 440 58.6
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 8.9e-142 507.7 458 58.5
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 4.4e-141 505.4 440 58.4
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 6.4e-140 501.5 428 57.7
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 6.4e-140 501.5 423 59.6
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.1e-139 500.7 440 58.0
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 1.4e-139 500.4 423 60.5
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 1.9e-139 500.0 436 57.8
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 4.2e-139 498.8 425 60.7
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 5.4e-139 498.4 419 59.7
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 9.2e-139 497.7 441 56.7
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 3.1e-134 482.6 521 51.2
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 8.4e-132 474.6 400 59.5
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 1.6e-130 470.3 418 56.0
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 4.6e-130 468.8 426 56.3
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 7.8e-130 468.0 406 56.4
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 1.3e-129 467.2 423 56.0
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 1.3e-129 467.2 367 65.1
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.3e-127 460.7 458 53.9
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 1.6e-127 460.3 363 62.8
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 6.2e-127 458.4 422 56.6
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 6.2e-127 458.4 422 56.6
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 1.8e-126 456.8 415 57.1
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 2.6e-125 453.0 423 56.0
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 4.9e-124 448.7 416 56.7
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 1.9e-123 446.8 422 55.7
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 2.4e-123 446.4 375 60.3
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 3.2e-123 446.0 433 52.9
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 2.7e-122 443.0 416 55.3
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 3.5e-122 442.6 411 56.4
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 4.6e-122 442.2 411 56.2
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 1.0e-121 441.0 411 55.7
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 5.1e-121 438.7 427 54.6
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 9.0e-118 427.9 363 59.2
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 5.8e-117 425.2 422 53.8
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.3e-116 424.1 379 57.0
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 2.9e-116 422.9 651 39.6
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 5.7e-112 408.7 300 64.3
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 5.0e-108 395.6 420 49.3
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 6.7e-105 385.2 311 62.4
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 2.5e-99 366.7 419 46.3
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.5e-83 313.5 292 56.8
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 2.6e-77 293.5 486 37.4
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 2.1e-74 283.9 463 38.0
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 3.6e-74 283.1 272 54.8
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.7e-68 264.2 236 58.5
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 1.6e-58 231.1 202 59.9
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 1.0e-57 228.4 209 52.2
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 1.1e-54 218.4 210 52.4
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 7.0e-46 189.1 194 51.0
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 1.7e-44 184.5 296 40.5
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 5.2e-41 172.9 178 48.9
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 6.4e-39 166.0 173 52.6
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 8.3e-39 165.6 113 68.1
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 4.1e-38 163.3 126 64.3
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 2.2e-23 114.4 110 50.0
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 1.1e-17 95.5 101 48.5
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 9.9e-16 89.0 89 53.9
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 6.4e-15 86.3 135 41.5
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 3.6e-10 70.5 50 64.0
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 2.4e-09 67.8 221 30.3
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 6.9e-09 66.2 113 38.1
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 1.2e-08 65.5 245 24.5
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 3.8e-07 60.5 44 65.9


User provided reference genes

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