Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 8.0e-88 327.0 161 100.0
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 6.9e-55 217.6 117 91.5
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 6.9e-55 217.6 117 91.5
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 3.3e-49 198.7 126 80.2
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 2.8e-48 195.7 118 86.4
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 1.8e-47 193.0 117 84.6
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 3.1e-47 192.2 120 82.5
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 4.0e-47 191.8 119 83.2
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 9.0e-47 190.7 120 81.7
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 1.2e-46 190.3 117 82.1
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 2.6e-46 189.1 134 70.9
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 4.5e-46 188.3 119 81.5
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 7.6e-46 187.6 120 80.0
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 7.6e-46 187.6 118 82.2
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 7.6e-46 187.6 121 77.7
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 1.3e-45 186.8 121 80.2
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 2.9e-45 185.7 120 79.2
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 3.8e-45 185.3 120 79.2
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 3.8e-45 185.3 120 79.2
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 3.8e-45 185.3 117 80.3
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 4.9e-45 184.9 118 81.4
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 8.4e-45 184.1 121 77.7
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 8.4e-45 184.1 121 77.7
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 1.1e-44 183.7 134 69.4
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 1.1e-44 183.7 130 76.9
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 1.9e-44 183.0 134 69.4
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 2.4e-44 182.6 120 76.7
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 2.4e-44 182.6 117 78.6
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 2.4e-44 182.6 121 79.3
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 2.4e-44 182.6 120 79.2
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 3.2e-44 182.2 124 77.4
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 3.2e-44 182.2 126 73.8
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 4.2e-44 181.8 117 79.5
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 4.2e-44 181.8 134 69.4
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 4.2e-44 181.8 139 70.5
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 4.2e-44 181.8 118 80.5
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 4.2e-44 181.8 118 77.1
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 5.5e-44 181.4 135 68.9
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 9.3e-44 180.6 134 68.7
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 9.3e-44 180.6 124 78.2
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 9.3e-44 180.6 139 67.6
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 1.2e-43 180.3 128 75.8
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.2e-43 180.3 117 77.8
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 1.6e-43 179.9 135 68.9
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 1.6e-43 179.9 117 76.9
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 2.1e-43 179.5 122 74.6
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 2.1e-43 179.5 119 79.8
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 2.1e-43 179.5 117 78.6
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 2.7e-43 179.1 116 77.6
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 3.5e-43 178.7 117 78.6
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 4.6e-43 178.3 119 75.6
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 4.6e-43 178.3 121 76.0
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 6.0e-43 177.9 118 72.0
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 6.0e-43 177.9 121 76.0
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 6.0e-43 177.9 118 72.9
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 1.0e-42 177.2 117 79.5
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 1.0e-42 177.2 127 72.4
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 1.3e-42 176.8 120 75.8
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 2.3e-42 176.0 118 71.2
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.3e-42 176.0 117 77.8
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 2.3e-42 176.0 145 64.1
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.0e-42 175.6 117 78.6
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 5.1e-42 174.9 119 75.6
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 6.7e-42 174.5 128 72.7
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 6.7e-42 174.5 152 62.5
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 6.7e-42 174.5 119 76.5
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 8.7e-42 174.1 119 77.3
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 1.1e-41 173.7 122 73.8
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.5e-41 173.3 117 76.1
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 1.9e-41 172.9 118 70.3
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 2.5e-41 172.6 118 73.7
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 2.5e-41 172.6 118 75.4
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 2.5e-41 172.6 126 74.6
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 4.3e-41 171.8 118 76.3
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 7.4e-41 171.0 117 76.1
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 1.3e-40 170.2 136 66.9
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 1.6e-40 169.9 135 67.4
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 1.6e-40 169.9 117 76.1
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 2.1e-40 169.5 118 73.7
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 2.1e-40 169.5 118 73.7
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 2.8e-40 169.1 120 72.5
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 3.7e-40 168.7 117 73.5
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 4.8e-40 168.3 117 74.4
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 8.2e-40 167.5 117 73.5
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 1.1e-39 167.2 164 61.6
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 1.1e-39 167.2 111 75.7
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 1.8e-39 166.4 117 73.5
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 1.8e-39 166.4 121 76.0
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 1.8e-39 166.4 121 76.0
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 2.4e-39 166.0 142 66.2
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 5.3e-39 164.9 117 73.5
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 9.0e-39 164.1 135 66.7
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 1.5e-38 163.3 122 68.9
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 2.6e-38 162.5 117 69.2
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 3.4e-38 162.2 125 70.4
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 4.5e-38 161.8 117 73.5
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 1.0e-37 160.6 119 71.4
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 2.2e-37 159.5 119 68.9
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 3.8e-37 158.7 119 73.9
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 3.8e-37 158.7 130 64.6
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 4.9e-37 158.3 154 58.4
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 4.9e-37 158.3 132 63.6
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 2.5e-36 156.0 117 70.1
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 5.5e-36 154.8 127 63.8
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 3.5e-35 152.1 116 66.4
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 3.0e-34 149.1 165 52.1
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 5.1e-34 148.3 81 88.9
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 5.1e-34 148.3 132 58.3
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 1.1e-33 147.1 117 63.2
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 1.9e-33 146.4 121 65.3
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 2.5e-33 146.0 120 65.0
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 5.7e-33 144.8 78 91.0
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 3.4e-30 135.6 82 79.3
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 1.3e-29 133.7 132 59.1
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 3.8e-29 132.1 75 84.0
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 5.0e-29 131.7 86 77.9
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 1.6e-27 126.7 94 68.1
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 3.3e-25 119.0 88 68.2
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 8.2e-24 114.4 89 64.0
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 1.1e-23 114.0 103 57.3
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 1.4e-23 113.6 104 57.7
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 2.2e-21 106.3 80 66.2
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 7.2e-20 101.3 75 64.0
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 2.1e-19 99.8 78 66.7
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 6.3e-16 88.2 93 50.5
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 4.1e-15 85.5 73 60.3
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 2.4e-07 59.7 36 86.1


User provided reference genes

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