Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 5.8e-107 391.0 205 100.0
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 4.0e-92 341.7 238 79.4
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 7.4e-70 267.7 209 71.3
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 2.8e-69 265.8 211 71.1
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 1.2e-67 260.4 211 69.7
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 1.1e-65 253.8 207 68.6
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 1.9e-65 253.1 211 68.2
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 2.5e-65 252.7 194 70.1
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 9.3e-65 250.8 191 71.7
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 6.0e-64 248.1 209 67.0
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 7.9e-64 247.7 208 64.9
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 7.9e-64 247.7 207 67.1
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 2.3e-63 246.1 211 68.7
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 3.9e-63 245.4 213 65.3
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.9e-62 243.0 208 66.3
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 3.7e-61 238.8 211 63.0
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 1.1e-60 237.3 213 65.7
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 4.1e-60 235.3 196 64.8
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 9.0e-60 234.2 196 64.3
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 3.4e-59 232.3 196 64.3
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 5.9e-59 231.5 210 62.4
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 5.9e-59 231.5 209 65.6
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 7.6e-59 231.1 182 69.8
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 7.6e-59 231.1 210 62.4
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 1.7e-58 229.9 183 68.3
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.7e-58 229.9 192 67.7
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 2.2e-58 229.6 204 64.2
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 3.8e-58 228.8 210 61.9
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 1.1e-57 227.3 210 61.9
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 7.2e-57 224.6 210 61.4
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 7.2e-57 224.6 196 65.3
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 9.3e-57 224.2 182 69.2
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 2.7e-56 222.6 209 60.8
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 3.6e-56 222.2 210 61.4
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 4.6e-56 221.9 210 60.0
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 4.6e-56 221.9 211 61.6
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 4.6e-56 221.9 183 67.2
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 7.9e-56 221.1 183 67.2
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.0e-55 220.7 178 69.1
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 1.8e-55 219.9 183 66.7
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 2.3e-55 219.5 205 62.0
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 3.9e-55 218.8 212 59.9
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 5.1e-55 218.4 212 59.4
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 5.1e-55 218.4 211 59.7
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 5.1e-55 218.4 208 59.6
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 8.7e-55 217.6 184 67.4
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 1.1e-54 217.2 179 68.2
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 2.5e-54 216.1 210 60.0
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 2.5e-54 216.1 178 68.5
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 4.3e-54 215.3 211 61.1
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 7.4e-54 214.5 213 60.6
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 9.7e-54 214.2 209 58.4
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 1.3e-53 213.8 181 63.0
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 2.8e-53 212.6 211 59.7
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 4.8e-53 211.8 203 60.6
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 6.3e-53 211.5 214 59.3
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 8.2e-53 211.1 211 59.2
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.8e-52 209.9 209 57.4
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 3.1e-52 209.1 183 62.3
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 6.9e-52 208.0 183 63.4
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 6.9e-52 208.0 209 58.4
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 6.9e-52 208.0 209 58.4
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 6.9e-52 208.0 185 61.6
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.5e-51 205.3 209 57.9
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 1.7e-50 203.4 216 59.7
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 2.2e-50 203.0 225 53.8
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 5.0e-50 201.8 178 63.5
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 1.1e-49 200.7 191 58.6
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 1.1e-49 200.7 194 58.2
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 1.1e-49 200.7 180 63.3
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 1.4e-49 200.3 160 65.6
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 1.9e-49 199.9 181 61.9
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 2.5e-49 199.5 162 65.4
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 2.5e-49 199.5 161 65.2
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 4.2e-49 198.7 169 64.5
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 7.2e-49 198.0 136 75.7
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 1.6e-48 196.8 216 53.2
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 2.1e-48 196.4 136 75.0
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 2.1e-48 196.4 194 60.3
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 2.7e-48 196.1 136 75.0
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 2.7e-48 196.1 187 63.6
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 6.1e-48 194.9 136 75.0
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 7.9e-48 194.5 179 59.8
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 7.9e-48 194.5 185 61.1
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 1.0e-47 194.1 167 64.7
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 1.4e-47 193.7 193 58.0
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 1.8e-47 193.4 162 64.2
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 2.3e-47 193.0 133 72.9
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 2.3e-47 193.0 145 72.4
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 3.0e-47 192.6 138 73.2
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 6.7e-47 191.4 162 63.0
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 8.8e-47 191.0 138 72.5
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 2.6e-46 189.5 133 70.7
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.4e-46 188.7 154 67.5
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 1.1e-44 184.1 169 60.4
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 2.0e-43 179.9 139 70.5
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 5.0e-42 175.3 155 61.9
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 1.4e-41 173.7 191 51.8
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 4.7e-40 168.7 189 54.0
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 3.5e-35 152.5 132 64.4
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 6.5e-34 148.3 174 47.1
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 4.2e-33 145.6 101 72.3
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 2.7e-32 142.9 127 57.5
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 2.6e-30 136.3 134 53.0
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 1.3e-26 124.0 132 46.2
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 7.2e-25 118.2 130 51.5
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 5.2e-23 112.1 118 56.8
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 1.1e-20 104.4 70 75.7
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 5.7e-14 82.0 89 48.3
Cre02.g073850 Chlamydomonas reinhardtii HOM05D007072 ORTHO05D008841 5.2e-07 58.9 104 31.7


User provided reference genes

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