Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 9.5e-133 476.9 244 100.0
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.3e-131 472.2 245 99.6
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 3.4e-106 388.7 267 76.0
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 9.9e-98 360.5 224 79.9
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 1.9e-96 356.3 229 76.4
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 5.5e-96 354.8 232 77.2
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 5.5e-96 354.8 232 77.2
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 7.1e-96 354.4 232 77.2
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 3.5e-95 352.1 237 76.4
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 1.3e-94 350.1 230 76.5
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 1.8e-94 349.7 227 76.7
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 6.7e-94 347.8 235 73.6
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 8.7e-94 347.4 223 76.7
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 1.1e-93 347.1 226 77.4
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 3.3e-93 345.5 236 72.9
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 5.6e-93 344.7 225 76.4
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 7.4e-93 344.4 241 74.3
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 1.6e-92 343.2 226 75.2
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 2.8e-92 342.4 229 73.4
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 2.8e-92 342.4 226 73.9
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 1.4e-91 340.1 227 74.9
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 1.8e-91 339.7 231 73.6
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 2.4e-91 339.3 234 72.2
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 4.0e-91 338.6 225 75.1
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 6.9e-91 337.8 226 75.2
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 6.9e-91 337.8 233 72.5
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 1.2e-90 337.0 227 73.1
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 2.0e-90 336.3 232 74.1
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 2.6e-90 335.9 228 72.4
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 3.4e-90 335.5 226 73.9
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 3.4e-90 335.5 234 71.4
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 3.4e-90 335.5 232 72.8
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 4.5e-90 335.1 222 75.2
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 4.5e-90 335.1 222 73.9
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 5.8e-90 334.7 222 74.3
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 7.6e-90 334.3 225 74.7
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 1.7e-89 333.2 226 73.0
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 1.7e-89 333.2 227 74.9
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 6.5e-89 331.3 229 71.6
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 6.5e-89 331.3 233 71.7
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 1.4e-88 330.1 228 71.1
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 2.5e-88 329.3 224 72.3
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 3.2e-88 328.9 220 73.6
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 3.2e-88 328.9 220 73.6
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.2e-88 328.9 221 74.2
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 4.2e-88 328.6 232 71.1
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 5.5e-88 328.2 228 70.2
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 7.1e-88 327.8 231 71.9
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 7.1e-88 327.8 240 71.2
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.2e-87 327.0 232 71.6
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 1.2e-87 327.0 221 72.4
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 2.7e-87 325.9 226 73.0
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 6.0e-87 324.7 225 72.9
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 6.0e-87 324.7 225 72.0
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 1.0e-86 323.9 276 62.7
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 1.8e-86 323.2 224 70.5
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.8e-86 323.2 235 68.9
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 2.3e-86 322.8 224 70.5
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 2.3e-86 322.8 220 72.3
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 2.3e-86 322.8 238 68.9
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 3.9e-86 322.0 229 70.3
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 5.1e-86 321.6 224 71.0
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 6.7e-86 321.2 225 71.6
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 6.7e-86 321.2 228 70.2
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 6.7e-86 321.2 232 69.0
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 6.7e-86 321.2 230 70.4
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.9e-85 319.7 234 67.9
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 7.4e-85 317.8 232 66.8
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.3e-84 317.0 183 80.9
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 2.8e-84 315.8 175 84.6
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.8e-84 315.8 235 68.5
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.8e-84 315.8 250 65.6
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 8.2e-84 314.3 224 70.5
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 8.2e-84 314.3 237 67.1
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 4.1e-83 312.0 218 72.5
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 2.0e-82 309.7 233 68.2
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 2.0e-82 309.7 300 56.7
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 2.0e-82 309.7 287 58.5
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 4.5e-82 308.5 221 71.5
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 1.7e-81 306.6 221 68.8
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 5.0e-81 305.1 219 71.2
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 2.5e-80 302.8 231 65.8
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 2.5e-80 302.8 229 67.2
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 9.4e-80 300.8 189 74.6
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 8.8e-78 294.3 182 75.8
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 9.1e-75 284.3 224 67.0
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 1.0e-73 280.8 230 58.7
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 2.2e-73 279.6 194 71.6
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 1.9e-72 276.6 233 65.2
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 5.1e-70 268.5 227 59.0
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 2.0e-69 266.5 160 78.1
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 3.3e-69 265.8 189 72.0
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 4.4e-69 265.4 224 59.4
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 4.8e-68 261.9 246 58.1
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 6.3e-68 261.5 180 67.2
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 5.9e-66 255.0 183 64.5
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 5.0e-65 251.9 259 52.5
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.7e-63 246.1 183 67.8
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 6.1e-63 245.0 381 42.0
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 1.8e-59 233.4 227 56.4
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 4.1e-59 232.3 188 58.0
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 9.1e-51 204.5 150 71.3
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 3.2e-48 196.1 191 49.7
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 3.6e-47 192.6 161 64.0
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 5.2e-46 188.7 151 66.2
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 1.0e-38 164.5 133 65.4
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 1.0e-38 164.5 133 65.4
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 1.3e-36 157.5 164 53.7
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 1.1e-35 154.5 163 47.2
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 5.4e-35 152.1 221 38.5
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 5.9e-34 148.7 135 60.0
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 7.5e-29 131.7 149 51.7
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 6.4e-28 128.6 149 51.0
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 2.3e-22 110.2 145 44.8
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 2.3e-22 110.2 103 61.2
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 1.2e-21 107.8 108 60.2
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 7.5e-21 105.1 78 66.7
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 9.2e-19 98.2 54 77.8
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 1.1e-16 91.3 97 54.6
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 7.3e-16 88.6 96 56.2
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 4.4e-13 79.3 48 75.0
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 8.3e-12 75.1 53 67.9


User provided reference genes

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