Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 3.0e-88 328.6 174 100.0
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 1.5e-76 289.7 174 89.1
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 3.2e-50 202.2 170 67.1
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 7.4e-47 191.0 150 68.7
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 1.6e-44 183.3 167 64.7
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 4.5e-44 181.8 162 63.6
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 4.5e-44 181.8 121 75.2
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 1.0e-43 180.6 130 73.8
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 5.0e-43 178.3 131 69.5
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 2.5e-42 176.0 166 63.9
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 3.2e-42 175.6 170 59.4
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 3.2e-42 175.6 114 77.2
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 5.5e-42 174.9 174 59.2
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 7.2e-42 174.5 154 63.6
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 2.1e-41 172.9 112 81.2
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 2.1e-41 172.9 165 57.0
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 2.1e-41 172.9 137 73.0
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 4.7e-41 171.8 161 64.6
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 8.0e-41 171.0 174 60.3
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 1.4e-40 170.2 171 59.1
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 1.4e-40 170.2 130 67.7
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 1.4e-40 170.2 148 66.2
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 1.8e-40 169.9 167 61.1
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 1.8e-40 169.9 154 57.8
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.0e-40 169.1 121 73.6
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 5.2e-40 168.3 160 61.2
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 6.7e-40 167.9 117 71.8
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 6.7e-40 167.9 166 59.0
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 6.7e-40 167.9 166 59.6
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 2.0e-39 166.4 123 71.5
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 2.6e-39 166.0 130 63.8
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 3.3e-39 165.6 170 56.5
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 9.7e-39 164.1 112 75.0
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 1.3e-38 163.7 97 78.4
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.7e-38 163.3 180 53.9
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.2e-38 162.9 180 55.6
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 2.2e-38 162.9 163 55.8
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 2.8e-38 162.5 121 69.4
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 3.7e-38 162.2 180 55.0
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 4.8e-38 161.8 117 73.5
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 1.4e-37 160.2 186 51.6
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 1.4e-37 160.2 177 55.4
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 1.8e-37 159.8 127 68.5
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 2.4e-37 159.5 137 65.0
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 2.4e-37 159.5 178 56.2
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 3.1e-37 159.1 137 62.8
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 2.0e-36 156.4 158 55.7
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 1.0e-35 154.1 114 67.5
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 1.7e-35 153.3 156 60.3
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 2.2e-35 152.9 114 66.7
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 1.1e-34 150.6 157 54.1
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 5.5e-34 148.3 167 49.7
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 1.2e-33 147.1 170 52.9
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 1.2e-33 147.1 154 59.7
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 1.6e-33 146.7 128 63.3
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 6.1e-33 144.8 93 77.4
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.4e-32 143.7 91 79.1
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 1.4e-32 143.7 135 57.0
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 1.4e-32 143.7 119 66.4
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 1.8e-32 143.3 140 60.7
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 4.0e-32 142.1 119 65.5
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 2.0e-31 139.8 174 49.4
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 2.6e-31 139.4 154 51.3
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 3.4e-31 139.0 149 54.4
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 5.7e-31 138.3 145 56.6
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 9.8e-31 137.5 90 72.2
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 2.2e-30 136.3 156 51.9
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 2.8e-30 136.0 156 51.9
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 2.8e-30 136.0 156 51.9
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 3.7e-30 135.6 116 62.9
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 2.4e-29 132.9 87 72.4
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 3.1e-29 132.5 147 52.4
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 7.0e-29 131.3 148 52.7
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 7.0e-29 131.3 148 52.7
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 7.0e-29 131.3 117 59.0
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 7.0e-29 131.3 79 81.0
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 4.5e-28 128.6 113 59.3
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 4.5e-28 128.6 113 57.5
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 5.9e-28 128.3 145 49.0
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 5.9e-28 128.3 97 67.0
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 1.5e-26 123.6 96 62.5
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 4.0e-24 115.5 86 65.1
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 5.7e-23 111.7 69 72.5
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 8.3e-22 107.8 93 71.0
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 1.2e-20 104.0 91 52.7
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 1.0e-19 100.9 95 53.7
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 1.0e-16 90.9 95 46.3
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 1.1e-13 80.9 108 56.5
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 4.6e-12 75.5 100 55.0
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 1.3e-11 73.9 83 60.2
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 6.6e-11 71.6 61 75.4
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.5e-10 69.7 66 66.7
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.5e-10 69.7 66 66.7
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 3.3e-10 69.3 84 44.0
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 5.6e-10 68.6 46 78.3
Glyma.07G171100 Glycine max HOM05D007597 ORTHO05D009608 3.1e-08 62.8 102 40.2


User provided reference genes

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