Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G134100 Populus trichocarpa HOM05D007313 ORTHO05D005299 4.9e-38 160.6 79 100.0
Sabra08G0102600 Salix brachista HOM05D007313 ORTHO05D005299 1.1e-32 142.9 76 89.5
Potri.010G107200 Populus trichocarpa HOM05D007313 ORTHO05D005299 3.3e-26 121.3 79 77.2
Sabra10G0078300 Salix brachista HOM05D007313 ORTHO05D005299 2.1e-20 102.1 72 72.2
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 1.5e-18 95.9 78 66.7
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 1.3e-17 92.8 77 66.2
Duzib248G0390 Durio zibethinus HOM05D007313 ORTHO05D005299 1.6e-17 92.4 77 66.2
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 1.4e-16 89.4 61 70.5
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 1.4e-16 89.4 58 75.9
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 1.4e-16 89.4 58 75.9
Manes.15G133700 Manihot esculenta HOM05D007313 ORTHO05D005299 2.4e-16 88.6 79 64.6
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 5.3e-16 87.4 75 61.3
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 5.3e-16 87.4 75 61.3
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 5.3e-16 87.4 75 61.3
Cfa015015 Carpinus fangiana HOM05D007313 ORTHO05D005299 6.9e-16 87.0 72 62.5
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 2.0e-15 85.5 78 60.3
Atru.chr11.945 Acer truncatum HOM05D007313 ORTHO05D005299 3.4e-15 84.7 62 64.5
Manes.17G083600 Manihot esculenta HOM05D007313 ORTHO05D005299 4.5e-15 84.3 70 64.3
Prupe.1G332700 Prunus persica HOM05D007313 ORTHO05D005299 1.9e-13 79.0 76 59.2
Dinv10480 Davidia involucrata HOM05D007313 ORTHO05D005299 9.3e-13 76.6 60 68.3
MD16G1019400 Malus domestica HOM05D007313 ORTHO05D005299 1.6e-12 75.9 68 57.4
QL03p035637 Quercus lobata HOM05D007313 ORTHO05D005299 2.1e-12 75.5 76 51.3
BcaC08g46215 Brassica carinata HOM05D007313 ORTHO05D005299 2.7e-12 75.1 62 62.9
BolC6t39221H Brassica oleracea HOM05D007313 ORTHO05D005299 2.7e-12 75.1 62 62.9
Carub.0001s2549 Capsella rubella HOM05D007313 ORTHO05D005299 1.8e-11 72.4 73 56.2
CSS0045507 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 2.3e-11 72.0 68 57.4
THA.LOC104825566 Tarenaya hassleriana HOM05D007313 ORTHO05D005299 2.3e-11 72.0 79 50.6
CARHR026470 Cardamine hirsuta HOM05D007313 ORTHO05D005299 3.0e-11 71.6 73 54.8
Lj4g0008951 Lotus japonicus HOM05D007313 ORTHO05D005299 3.0e-11 71.6 65 58.5
Cpa.g.sc2.206 Carica papaya HOM05D007313 ORTHO05D005299 3.9e-11 71.2 61 63.9
Rhsim09G0090300 Rhododendron simsii HOM05D007313 ORTHO05D005299 3.9e-11 71.2 63 60.3
Sp5g22920 Schrenkiella parvula HOM05D007313 ORTHO05D005299 3.9e-11 71.2 71 56.3
Thhalv10019740m.g Eutrema salsugineum HOM05D007313 ORTHO05D005299 5.1e-11 70.9 55 65.5
BcaC03g14888 Brassica carinata HOM05D007313 ORTHO05D005299 6.7e-11 70.5 62 58.1
C02p23620 Brassica napus HOM05D007313 ORTHO05D005299 6.7e-11 70.5 62 58.1
BolC2t08492H Brassica oleracea HOM05D007313 ORTHO05D005299 6.7e-11 70.5 62 58.1
BraA07t31073Z Brassica rapa HOM05D007313 ORTHO05D005299 6.7e-11 70.5 55 65.5
BcaB03g15149 Brassica carinata HOM05D007313 ORTHO05D005299 8.7e-11 70.1 55 65.5
BcaB03g15385 Brassica carinata HOM05D007313 ORTHO05D005299 8.7e-11 70.1 79 54.4
BcaB05g24323 Brassica carinata HOM05D007313 ORTHO05D005299 8.7e-11 70.1 62 58.1
AT1G67920 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 1.1e-10 69.7 71 57.7
ClCG01G006530 Citrullus lanatus HOM05D007313 ORTHO05D005299 1.1e-10 69.7 68 60.3
Sp1g23170 Schrenkiella parvula HOM05D007313 ORTHO05D005299 1.1e-10 69.7 73 53.4
Aa31LG7G9440 Aethionema arabicum HOM05D007313 ORTHO05D005299 1.5e-10 69.3 67 55.2
BcaB03g12049 Brassica carinata HOM05D007313 ORTHO05D005299 1.9e-10 68.9 74 54.1
CSS0007506 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 1.9e-10 68.9 68 55.9
CARHR060560 Cardamine hirsuta HOM05D007313 ORTHO05D005299 1.9e-10 68.9 81 54.3
Phvul.002G320600 Phaseolus vulgaris HOM05D007313 ORTHO05D005299 1.9e-10 68.9 55 63.6
AL2G26720 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 2.5e-10 68.6 71 56.3
BcaC08g46017 Brassica carinata HOM05D007313 ORTHO05D005299 2.5e-10 68.6 79 50.6
A07p32280 Brassica napus HOM05D007313 ORTHO05D005299 2.5e-10 68.6 79 53.2
A07p34460 Brassica napus HOM05D007313 ORTHO05D005299 2.5e-10 68.6 55 63.6
C06p38120 Brassica napus HOM05D007313 ORTHO05D005299 2.5e-10 68.6 79 50.6
BolC6t38909H Brassica oleracea HOM05D007313 ORTHO05D005299 2.5e-10 68.6 79 50.6
BraA07t30853Z Brassica rapa HOM05D007313 ORTHO05D005299 2.5e-10 68.6 79 53.2
Carub.0002s1441 Capsella rubella HOM05D007313 ORTHO05D005299 2.5e-10 68.6 71 56.3
Ciclev10017248m.g Citrus clementina HOM05D007313 ORTHO05D005299 2.5e-10 68.6 65 55.4
DCAR_023578 Daucus carota HOM05D007313 ORTHO05D005299 4.3e-10 67.8 79 49.4
A02p14560 Brassica napus HOM05D007313 ORTHO05D005299 7.4e-10 67.0 73 56.2
BraA02t06526Z Brassica rapa HOM05D007313 ORTHO05D005299 7.4e-10 67.0 73 56.2
SalBow2G1257 Salvia bowleyana HOM05D007313 ORTHO05D005299 7.4e-10 67.0 81 51.9
Sopen04g003130 Solanum pennellii HOM05D007313 ORTHO05D005299 1.3e-09 66.2 54 66.7
TAR629G3106 Trochodendron aralioides HOM05D007313 ORTHO05D005299 1.3e-09 66.2 61 50.8
AL1G40310 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 1.6e-09 65.9 73 52.1
VMungo0540G1213 Vigna mungo HOM05D007313 ORTHO05D005299 1.6e-09 65.9 53 62.3
DCAR_026801 Daucus carota HOM05D007313 ORTHO05D005299 2.1e-09 65.5 80 48.8
PGSC0003DMG400029516 Solanum tuberosum HOM05D007313 ORTHO05D005299 2.1e-09 65.5 54 64.8
A08p26710 Brassica napus HOM05D007313 ORTHO05D005299 2.8e-09 65.1 68 55.9
BraA08t34617Z Brassica rapa HOM05D007313 ORTHO05D005299 2.8e-09 65.1 68 55.9
Solyc04g007990.1 Solanum lycopersicum HOM05D007313 ORTHO05D005299 2.8e-09 65.1 54 64.8
FAN07G0870 Fragaria x ananassa HOM05D007313 ORTHO05D005299 3.7e-09 64.7 59 57.6
FAN22G0875 Fragaria x ananassa HOM05D007313 ORTHO05D005299 3.7e-09 64.7 59 57.6
Haze_10890 Corylus avellana HOM05D007313 ORTHO05D005299 6.2e-09 63.9 69 50.7
RcHm_v2.0_Chr4g0443131 Rosa chinensis HOM05D007313 ORTHO05D005299 8.1e-09 63.5 64 53.1
MELO3C005274.2 Cucumis melo HOM05D007313 ORTHO05D005299 1.1e-08 63.2 68 54.4
Glyma.05G238200 Glycine max HOM05D007313 ORTHO05D005299 1.1e-08 63.2 53 58.5
Psat7g008240 Pisum sativum HOM05D007313 ORTHO05D005299 1.1e-08 63.2 58 55.2
TAR371G1237 Trochodendron aralioides HOM05D008500 ORTHO05D005299 1.1e-08 63.2 79 45.6
TAR371G0465 Trochodendron aralioides HOM05D008500 ORTHO05D005299 1.4e-08 62.8 79 45.6
Migut.E00472 Erythranthe guttata HOM05D007313 ORTHO05D005299 1.8e-08 62.4 80 50.0
FvH4_4g33670 Fragaria vesca HOM05D007313 ORTHO05D005299 1.8e-08 62.4 59 55.9
FAN12G3843 Fragaria x ananassa HOM05D007313 ORTHO05D005299 1.8e-08 62.4 59 55.9
Glyma.08G045300 Glycine max HOM05D007313 ORTHO05D005299 3.1e-08 61.6 72 50.0
CiPaw.06G051300 Carya illinoinensis HOM05D007313 ORTHO05D005299 4.0e-08 61.2 82 51.2
Ca_17263_v3 Cicer arietinum L. HOM05D007313 ORTHO05D005299 4.0e-08 61.2 59 55.9
Ca_17284_v3 Cicer arietinum L. HOM05D007313 ORTHO05D005299 4.0e-08 61.2 59 55.9
AT1G24600 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 5.3e-08 60.8 56 58.9
CANSAT01G0361 Cannabis sativa HOM05D007313 ORTHO05D005299 6.9e-08 60.5 60 55.0
MBI19_g22070_MAGBIO Magnolia biondii HOM05D008500 ORTHO05D005299 6.9e-08 60.5 64 53.1
Nn4g24351 Nelumbo nucifera HOM05D008500 ORTHO05D005299 6.9e-08 60.5 77 46.8
TPR.G18382 Trifolium pratense HOM05D008500 ORTHO05D005299 6.9e-08 60.5 59 54.2
Nn3g18353 Nelumbo nucifera HOM05D008500 ORTHO05D005299 1.2e-07 59.7 66 48.5
Glyma.07G104300 Glycine max HOM05D008500 ORTHO05D005299 1.5e-07 59.3 64 54.7
TPR.G27729 Trifolium pratense HOM05D007313 ORTHO05D005299 2.0e-07 58.9 79 45.6
Glyma.09G173300 Glycine max HOM05D008500 ORTHO05D005299 4.5e-07 57.8 64 50.0
Manes.14G157100 Manihot esculenta HOM05D008500 ORTHO05D005299 4.5e-07 57.8 58 51.7
Eucgr.K02282 Eucalyptus grandis HOM05D008500 ORTHO05D005299 5.8e-07 57.4 85 49.4
BcaC06g35248 Brassica carinata HOM05D007313 ORTHO05D005299 9.9e-07 56.6 81 48.1
C07p18250 Brassica napus HOM05D007313 ORTHO05D005299 9.9e-07 56.6 81 48.1
BolC7t42335H Brassica oleracea HOM05D007313 ORTHO05D005299 9.9e-07 56.6 81 48.1
A07p12350 Brassica napus HOM05D007313 ORTHO05D005299 2.2e-06 55.5 81 48.1
BraA07t29016Z Brassica rapa HOM05D007313 ORTHO05D005299 2.2e-06 55.5 81 48.1
BcaB03g14014 Brassica carinata HOM05D007313 ORTHO05D005299 2.9e-06 55.1 74 48.6
Manes.06G003500 Manihot esculenta HOM05D008500 ORTHO05D005299 2.9e-06 55.1 68 55.9
Gorai.008G291300 Gossypium raimondii HOM05D008500 ORTHO05D005299 3.8e-06 54.7 81 45.7
Medtr8g105190 Medicago truncatula HOM05D007313 ORTHO05D005299 3.8e-06 54.7 75 46.7
CsaV3_5G028140 Cucumis sativus L. HOM05D007313 ORTHO05D005299 4.9e-06 54.3 57 52.6


User provided reference genes

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