Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.8e-164 582.4 278 100.0
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 5.8e-86 321.6 276 61.2
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 4.9e-85 318.5 275 61.5
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 9.3e-84 314.3 284 59.9
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 3.3e-81 305.8 275 58.5
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 7.4e-81 304.7 281 59.1
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 8.2e-80 301.2 275 57.8
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 1.4e-79 300.4 267 58.4
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.1e-79 299.3 281 57.7
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 3.1e-79 299.3 281 56.6
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 3.4e-78 295.8 276 57.2
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 8.4e-77 291.2 277 56.3
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 1.4e-76 290.4 275 55.3
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 4.2e-76 288.9 295 54.6
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.1e-76 288.1 277 55.2
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 9.3e-76 287.7 268 57.1
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 1.6e-75 287.0 277 55.6
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 4.6e-75 285.4 278 57.2
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 4.6e-75 285.4 282 55.7
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 3.0e-74 282.7 281 53.7
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.0e-74 282.7 269 55.0
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 8.7e-74 281.2 275 56.0
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 8.7e-74 281.2 277 54.5
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.7e-74 281.2 277 54.5
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 2.5e-73 279.6 282 54.6
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 3.3e-73 279.3 279 52.7
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 3.3e-73 279.3 279 53.8
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 4.3e-73 278.9 281 55.5
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 1.3e-72 277.3 277 53.1
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-72 277.3 269 55.0
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 1.6e-72 276.9 281 53.0
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 4.8e-72 275.4 277 53.1
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.8e-71 273.5 285 52.3
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 3.1e-71 272.7 281 53.7
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 5.3e-71 271.9 282 53.5
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.3e-71 271.9 287 51.2
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 6.9e-71 271.6 275 52.7
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.9e-71 271.6 296 50.0
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 6.9e-71 271.6 281 51.2
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 9.0e-71 271.2 285 51.6
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 1.2e-70 270.8 275 51.3
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 1.5e-70 270.4 281 53.4
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 2.0e-70 270.0 280 52.1
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 2.0e-70 270.0 267 56.6
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 5.9e-70 268.5 275 49.5
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 1.0e-69 267.7 282 50.4
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 1.7e-69 266.9 281 51.2
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 2.2e-69 266.5 347 46.1
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 3.8e-69 265.8 283 50.9
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 3.8e-69 265.8 266 55.3
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 5.0e-69 265.4 276 53.6
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 5.0e-69 265.4 281 49.5
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 6.5e-69 265.0 272 51.1
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 1.1e-68 264.2 282 53.2
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 1.4e-68 263.8 277 53.8
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 1.4e-68 263.8 277 53.8
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 1.4e-68 263.8 282 49.3
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 2.5e-68 263.1 275 51.3
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 3.2e-68 262.7 277 50.9
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 4.2e-68 262.3 274 53.3
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 9.4e-68 261.2 293 50.9
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 2.7e-67 259.6 286 51.0
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.6e-67 259.2 275 50.9
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.6e-67 259.2 290 48.6
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 6.1e-67 258.5 275 49.8
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 1.0e-66 257.7 279 48.7
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.1e-65 254.2 237 57.0
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.0e-65 253.4 275 47.6
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 3.3e-65 252.7 237 56.1
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 7.4e-65 251.5 277 50.2
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 7.4e-65 251.5 275 49.8
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.3e-64 250.8 277 48.0
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 2.2e-64 250.0 275 49.1
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 2.8e-64 249.6 230 56.1
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 4.8e-64 248.8 281 49.5
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 4.8e-64 248.8 281 50.5
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 8.2e-64 248.1 278 48.9
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 8.2e-64 248.1 275 48.4
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 8.2e-64 248.1 286 49.0
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 3.1e-63 246.1 286 48.6
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 1.5e-62 243.8 255 51.8
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.5e-62 243.8 289 45.7
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 2.6e-62 243.0 282 50.4
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 2.6e-62 243.0 287 47.4
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 2.6e-62 243.0 252 49.6
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 3.4e-62 242.7 281 49.5
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 4.5e-62 242.3 286 48.6
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 1.0e-61 241.1 293 47.4
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.2e-61 240.0 277 49.5
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 8.5e-61 238.0 230 53.5
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.1e-60 237.7 289 46.0
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 4.2e-60 235.7 328 44.8
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.7e-59 233.0 252 51.6
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 4.4e-57 225.7 291 44.0
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 4.8e-56 222.2 277 45.1
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 1.8e-55 220.3 237 49.8
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 5.9e-54 215.3 338 39.3
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 2.2e-48 196.8 176 52.8
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 1.5e-44 184.1 184 53.3
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 3.4e-41 172.9 171 52.6
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 2.2e-40 170.2 178 48.3
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 1.7e-37 160.6 267 42.3
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 6.8e-34 148.7 274 40.9
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 4.4e-33 146.0 288 33.0
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 9.8e-33 144.8 232 39.7
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 3.7e-32 142.9 189 43.4
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.8e-31 140.6 257 36.2
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 4.5e-30 136.0 180 43.9
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 1.5e-28 131.0 204 42.2
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 9.5e-28 128.3 135 50.4
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.4e-26 124.4 137 51.8
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 3.0e-26 123.2 142 45.1
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 4.0e-26 122.9 147 50.3
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 3.7e-24 116.3 237 32.9
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.1e-23 114.8 266 33.1
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 9.2e-23 111.7 179 39.7
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 3.5e-22 109.8 84 63.1
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 6.8e-18 95.5 90 56.7
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 2.3e-13 80.5 69 55.1
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 7.3e-12 75.5 58 60.3
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 2.8e-11 73.6 173 34.7
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 4.7e-11 72.8 174 31.6
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 6.8e-10 68.9 120 36.7
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 1.2e-09 68.2 73 43.8
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 9.8e-09 65.1 181 27.6
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 1.3e-08 64.7 42 71.4
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 3.7e-08 63.2 69 50.7
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 1.9e-07 60.8 141 31.9
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 9.2e-07 58.5 37 67.6
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 2.7e-06 57.0 44 59.1


User provided reference genes

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