Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G121700 Populus trichocarpa HOM05D004679 ORTHO05D005524 3.3e-176 621.7 333 100.0
Potri.010G123600 Populus trichocarpa HOM05D004679 ORTHO05D005524 7.6e-149 530.8 336 83.3
Sabra08G0092400 Salix brachista HOM05D004679 ORTHO05D005524 5.4e-139 498.0 335 85.1
Sabra10G0093600 Salix brachista HOM05D004679 ORTHO05D005524 1.9e-136 489.6 334 81.4
Manes.06G066900 Manihot esculenta HOM05D004679 ORTHO05D005524 4.8e-95 352.1 336 66.1
Manes.14G103500 Manihot esculenta HOM05D004679 ORTHO05D005524 3.0e-81 306.2 330 59.4
Duzib268G0767 Durio zibethinus HOM05D004679 ORTHO05D005524 6.3e-79 298.5 332 53.3
Thecc.02G227400 Theobroma cacao HOM05D004679 ORTHO05D005524 1.4e-78 297.4 335 57.0
Ciclev10015600m.g Citrus clementina HOM05D004679 ORTHO05D005524 1.2e-74 284.3 350 51.4
Gorai.005G192000 Gossypium raimondii HOM05D004679 ORTHO05D005524 2.3e-73 280.0 334 52.7
Duzib248G1266 Durio zibethinus HOM05D004679 ORTHO05D005524 6.8e-73 278.5 334 54.2
Duzib251G0437 Durio zibethinus HOM05D004679 ORTHO05D005524 6.8e-73 278.5 322 52.5
TWI79G1695 Tripterygium wilfordii HOM05D004679 ORTHO05D005524 6.8e-73 278.5 325 53.8
Gohir.A03G147600 Gossypium hirsutum HOM05D004679 ORTHO05D005524 2.0e-72 276.9 333 51.4
TWI31G1336 Tripterygium wilfordii HOM05D004679 ORTHO05D005524 3.2e-70 269.6 315 54.3
COL.COLO4_05113 Corchorus olitorius HOM05D004679 ORTHO05D005524 2.8e-66 256.5 334 49.4
Dinv31629 Davidia involucrata HOM05D004679 ORTHO05D005524 2.9e-63 246.5 320 48.8
CiPaw.15G086800 Carya illinoinensis HOM05D004679 ORTHO05D005524 1.9e-62 243.8 325 47.1
Atru.chr11.115 Acer truncatum HOM05D004679 ORTHO05D005524 2.7e-61 240.0 341 48.1
CiPaw.16G065600 Carya illinoinensis HOM05D004679 ORTHO05D005524 2.5e-59 233.4 331 48.0
Gohir.A04G097850 Gossypium hirsutum HOM05D004679 ORTHO05D005524 1.6e-58 230.7 328 44.8
FAN07G0705 Fragaria x ananassa HOM05D004679 ORTHO05D005524 1.4e-57 227.6 339 44.0
TAR371G1108 Trochodendron aralioides HOM05D004679 ORTHO05D005524 3.1e-57 226.5 329 44.1
THA.LOC104821925 Tarenaya hassleriana HOM05D004679 ORTHO05D005524 6.8e-57 225.3 333 50.2
FvH4_4g27210 Fragaria vesca HOM05D004679 ORTHO05D005524 4.4e-56 222.6 335 47.5
FAN12G3270 Fragaria x ananassa HOM05D004679 ORTHO05D005524 5.8e-56 222.2 335 47.8
Prupe.1G312600 Prunus persica HOM05D004679 ORTHO05D005524 9.8e-56 221.5 334 43.7
FAN12G2517 Fragaria x ananassa HOM05D004679 ORTHO05D005524 1.3e-55 221.1 335 47.5
CSS0010437 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 2.2e-55 220.3 332 45.2
ClCG05G022630 Citrullus lanatus HOM05D004679 ORTHO05D005524 2.2e-55 220.3 330 40.6
RcHm_v2.0_Chr4g0435001 Rosa chinensis HOM05D004679 ORTHO05D005524 2.9e-55 219.9 334 48.5
CsaV3_5G034410 Cucumis sativus L. HOM05D004679 ORTHO05D005524 4.9e-55 219.2 333 39.0
TAR629G3220 Trochodendron aralioides HOM05D004679 ORTHO05D005524 1.9e-54 217.2 326 47.2
CSS0014673 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 2.4e-54 216.9 332 44.6
Hma1.2p1_0061F.1_g033750 Hydrangea macrophylla HOM05D004679 ORTHO05D005524 2.4e-54 216.9 328 48.8
FAN22G1304 Fragaria x ananassa HOM05D004679 ORTHO05D005524 3.2e-54 216.5 335 48.7
Phvul.003G030600 Phaseolus vulgaris HOM05D004679 ORTHO05D005524 4.1e-54 216.1 341 41.6
QL01p041129 Quercus lobata HOM05D004679 ORTHO05D005524 4.1e-54 216.1 328 48.8
VMungo1215G2497 Vigna mungo HOM05D004679 ORTHO05D005524 4.1e-54 216.1 331 43.8
Glyma.08G261000 Glycine max HOM05D004679 ORTHO05D005524 7.8e-53 211.8 327 46.2
Eucgr.B03012 Eucalyptus grandis HOM05D004679 ORTHO05D005524 2.3e-52 210.3 335 43.6
MELO3C012256.2 Cucumis melo HOM05D004679 ORTHO05D005524 3.0e-52 209.9 333 38.4
CSS0006602 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 3.9e-52 209.5 319 46.4
CSS0017035 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 8.6e-52 208.4 319 46.1
TPR.G27958 Trifolium pratense HOM05D004679 ORTHO05D005524 8.6e-52 208.4 337 41.5
Nn4g23867 Nelumbo nucifera HOM05D004679 ORTHO05D005524 1.9e-51 207.2 332 46.7
Nn3g17866 Nelumbo nucifera HOM05D004679 ORTHO05D005524 9.5e-51 204.9 331 44.7
Gohir.D02G170800 Gossypium hirsutum HOM05D004679 ORTHO05D005524 1.2e-50 204.5 287 49.1
Nitab4.5_0003715g0040 Nicotiana tabacum HOM05D004679 ORTHO05D005524 1.2e-50 204.5 334 41.0
MD16G1041500 Malus domestica HOM05D004679 ORTHO05D005524 1.6e-50 204.1 331 43.8
Psat2g095800 Pisum sativum HOM05D004679 ORTHO05D005524 1.6e-50 204.1 330 43.0
Cc11_g10010 Coffea canephora HOM05D004679 ORTHO05D005524 2.8e-50 203.4 337 45.4
Gorai.012G122000 Gossypium raimondii HOM05D004679 ORTHO05D005524 3.6e-50 203.0 328 42.4
Solyc05g009420.1 Solanum lycopersicum HOM05D004679 ORTHO05D005524 4.7e-50 202.6 332 43.4
Cfa018585 Carpinus fangiana HOM05D004679 ORTHO05D005524 8.1e-50 201.8 327 46.5
Haze_17496 Corylus avellana HOM05D004679 ORTHO05D005524 1.4e-49 201.1 328 46.0
MD13G1040500 Malus domestica HOM05D004679 ORTHO05D005524 1.4e-49 201.1 330 39.7
Nitab4.5_0005669g0020 Nicotiana tabacum HOM05D004679 ORTHO05D005524 1.4e-49 201.1 334 41.9
CANSAT01G1145 Cannabis sativa HOM05D004679 ORTHO05D005524 2.3e-49 200.3 329 45.0
Gohir.D04G137600 Gossypium hirsutum HOM05D004679 ORTHO05D005524 2.3e-49 200.3 328 41.8
Sopen05g005230 Solanum pennellii HOM05D004679 ORTHO05D005524 2.3e-49 200.3 332 43.1
Medtr5g056480 Medicago truncatula HOM05D004679 ORTHO05D005524 3.1e-49 199.9 332 44.9
Migut.L01056 Erythranthe guttata HOM05D004679 ORTHO05D005524 5.2e-49 199.1 335 44.2
Sp5g23510 Schrenkiella parvula HOM05D004679 ORTHO05D005524 5.2e-49 199.1 332 45.8
MSTRG.7662 Avicennia marina HOM05D004679 ORTHO05D005524 5.8e-48 195.7 332 44.9
AT1G68440 Arabidopsis thaliana HOM05D004679 ORTHO05D005524 7.6e-48 195.3 336 43.2
Lj6P756T16 Lonicera japonica HOM05D004679 ORTHO05D005524 1.3e-47 194.5 328 41.8
BcaB03g15806 Brassica carinata HOM05D004679 ORTHO05D005524 8.3e-47 191.8 329 41.9
A07p34850 Brassica napus HOM05D004679 ORTHO05D005524 1.1e-46 191.4 330 44.5
MSTRG.848 Avicennia marina HOM05D004679 ORTHO05D005524 1.9e-46 190.7 328 41.2
Glyma.01G080500 Glycine max HOM05D004679 ORTHO05D005524 4.1e-46 189.5 336 45.8
C06p41510 Brassica napus HOM05D004679 ORTHO05D005524 9.2e-46 188.3 329 42.9
BolC6t39272H Brassica oleracea HOM05D004679 ORTHO05D005524 9.2e-46 188.3 329 42.9
BcaC08g46281 Brassica carinata HOM05D004679 ORTHO05D005524 2.1e-45 187.2 329 41.6
BcaC08g46285 Brassica carinata HOM05D004679 ORTHO05D005524 2.1e-45 187.2 329 41.6
Lj2g0027656 Lotus japonicus HOM05D004679 ORTHO05D005524 1.0e-44 184.9 326 41.7
A02p14990 Brassica napus HOM05D004679 ORTHO05D005524 2.3e-44 183.7 336 43.8
BcaC03g14945 Brassica carinata HOM05D004679 ORTHO05D005524 3.0e-44 183.3 331 44.1
Ca_07534_v3 Cicer arietinum L. HOM05D004679 ORTHO05D005524 3.9e-44 183.0 330 44.8
AL2G27300 Arabidopsis lyrata HOM05D004679 ORTHO05D005524 1.5e-43 181.0 332 43.4
C02p24550 Brassica napus HOM05D004679 ORTHO05D005524 2.5e-43 180.3 335 43.3
BcaB05g24380 Brassica carinata HOM05D004679 ORTHO05D005524 3.3e-43 179.9 330 44.2
BolC2t08557H Brassica oleracea HOM05D004679 ORTHO05D005524 4.3e-43 179.5 335 43.3
PGR102G2503 Punica granatum HOM05D004679 ORTHO05D005524 1.6e-42 177.6 335 43.6
AT1G25400 Arabidopsis thaliana HOM05D004679 ORTHO05D005524 2.1e-42 177.2 320 42.8
BraA02t06566Z Brassica rapa HOM05D004679 ORTHO05D005524 1.1e-41 174.9 334 42.2
Lalb_Chr10g0100061 Lupinus albus HOM05D004679 ORTHO05D005524 1.1e-41 174.9 321 43.3
Oeu003185.3 Olea europaea HOM05D004679 ORTHO05D005524 1.1e-41 174.9 331 39.6
PGSC0003DMG400014542 Solanum tuberosum HOM05D004679 ORTHO05D005524 1.1e-41 174.9 300 43.0
AL1G39920 Arabidopsis lyrata HOM05D004679 ORTHO05D005524 1.8e-41 174.1 320 43.8
Cpa.g.sc1.28 Carica papaya HOM05D004679 ORTHO05D005524 3.1e-41 173.3 204 51.5
Thhalv10018918m.g Eutrema salsugineum HOM05D004679 ORTHO05D005524 4.0e-41 172.9 329 42.9
SGA_v2.0_scaffold38G14941 Striga asiatica HOM05D004679 ORTHO05D005524 8.9e-41 171.8 330 37.0
CARHR061220 Cardamine hirsuta HOM05D004679 ORTHO05D005524 1.2e-40 171.4 336 41.4
Carub.0002s1495 Capsella rubella HOM05D004679 ORTHO05D005524 1.5e-40 171.0 337 42.7
Actinidia16661 Actinidia chinensis HOM05D004679 ORTHO05D005524 2.0e-40 170.6 331 37.5
Sed0013939 Sechium edule HOM05D004679 ORTHO05D005524 2.0e-40 170.6 335 36.7
BcaB03g14040 Brassica carinata HOM05D004679 ORTHO05D005524 4.4e-40 169.5 322 45.0
Dinv21072 Davidia involucrata HOM05D004679 ORTHO05D005524 1.7e-39 167.5 189 50.3
Rhsim09G0106900 Rhododendron simsii HOM05D004679 ORTHO05D005524 2.2e-39 167.2 322 39.8
Aqoxy3G00274 Aquilegia oxysepala HOM05D004679 ORTHO05D005524 2.4e-38 163.7 338 41.4
Lalb_Chr04g0254681 Lupinus albus HOM05D004679 ORTHO05D005524 2.4e-38 163.7 330 37.0
MBI09_g16518_MAGBIO Magnolia biondii HOM05D004679 ORTHO05D005524 5.4e-38 162.5 329 34.0
SGA_v2.0_scaffold36G14543 Striga asiatica HOM05D004679 ORTHO05D005524 1.0e-36 158.3 329 39.2
Carub.0001s2510 Capsella rubella HOM05D004679 ORTHO05D005524 1.3e-36 157.9 320 42.8
Sp1g22820 Schrenkiella parvula HOM05D004679 ORTHO05D005524 2.3e-36 157.1 324 43.5
SalBow8G2470 Salvia bowleyana HOM05D004679 ORTHO05D005524 3.9e-36 156.4 324 35.2
Sc14g0007400 Simmondsia chinensis HOM05D004679 ORTHO05D005524 3.9e-36 156.4 328 41.2
BcaC06g35214 Brassica carinata HOM05D004679 ORTHO05D005524 3.3e-35 153.3 326 41.7
C07p18590 Brassica napus HOM05D004679 ORTHO05D005524 3.3e-35 153.3 326 41.7
BolC7t42370H Brassica oleracea HOM05D004679 ORTHO05D005524 3.3e-35 153.3 326 41.7
Ah.02g128020 Amaranthus hybridus HOM05D004679 ORTHO05D005524 2.1e-34 150.6 326 39.3
BraA07t29036Z Brassica rapa HOM05D004679 ORTHO05D005524 4.8e-34 149.4 323 41.8
Nitab4.5_0005548g0020 Nicotiana tabacum HOM05D004679 ORTHO05D005524 6.2e-34 149.1 304 37.2
CARHR026080 Cardamine hirsuta HOM05D004679 ORTHO05D005524 6.9e-33 145.6 317 36.9
A07p12580 Brassica napus HOM05D004679 ORTHO05D005524 7.6e-32 142.1 323 39.9
Nitab4.5_0000057g0200 Nicotiana tabacum HOM05D004679 ORTHO05D005524 9.9e-32 141.7 303 35.0
Sed0011079 Sechium edule HOM05D004679 ORTHO05D005524 1.7e-31 141.0 336 32.1
Sopen04g002310 Solanum pennellii HOM05D004679 ORTHO05D005524 1.7e-31 141.0 319 33.2
ClCG08G005010 Citrullus lanatus HOM05D004679 ORTHO05D005524 2.2e-31 140.6 331 35.6
Solyc04g007250.1 Solanum lycopersicum HOM05D004679 ORTHO05D005524 2.2e-31 140.6 322 33.5
arahy.Tifrunner.gnm1.ann1.ZDDP39 Arachis hypogaea HOM05D004679 ORTHO05D005524 2.9e-31 140.2 323 37.8
Thhalv10008406m.g Eutrema salsugineum HOM05D004679 ORTHO05D005524 1.4e-30 137.9 318 41.5
Oeu034235.1 Olea europaea HOM05D004679 ORTHO05D005524 4.2e-30 136.3 331 35.3
PGSC0003DMG400005982 Solanum tuberosum HOM05D004679 ORTHO05D005524 5.4e-30 136.0 330 33.6
EL10Ac6g14380 Beta vulgaris HOM05D004679 ORTHO05D005524 3.5e-29 133.3 316 39.6
Psat6g226440 Pisum sativum HOM05D004679 ORTHO05D005524 7.9e-29 132.1 176 44.3
MELO3C011535.2 Cucumis melo HOM05D004679 ORTHO05D005524 1.0e-28 131.7 326 34.0
Glyma.20G116700 Glycine max HOM05D004679 ORTHO05D005524 8.7e-28 128.6 281 40.9
Sed0007978 Sechium edule HOM05D004679 ORTHO05D005524 4.3e-27 126.3 303 34.7
CsaV3_6G003280 Cucumis sativus L. HOM05D004679 ORTHO05D005524 5.6e-27 125.9 323 33.1
Ca_11162_v3 Cicer arietinum L. HOM05D004679 ORTHO05D005524 2.1e-26 124.0 324 38.6
Aa31LG7G9090 Aethionema arabicum HOM05D004679 ORTHO05D005524 1.8e-25 120.9 316 37.0
Lsat_1_v5_gn_4_15920 Lactuca sativa HOM05D004679 ORTHO05D005524 1.8e-25 120.9 273 32.6
TPR.G18826 Trifolium pratense HOM05D004679 ORTHO05D005524 2.4e-25 120.6 278 40.3
Ah.03g137540 Amaranthus hybridus HOM05D004679 ORTHO05D005524 3.1e-25 120.2 315 37.8
DCAR_026738 Daucus carota HOM05D004679 ORTHO05D005524 3.1e-25 120.2 313 34.5
Glyma.10G273200 Glycine max HOM05D004679 ORTHO05D005524 4.0e-25 119.8 197 39.6
Gohir.A05G321608 Gossypium hirsutum HOM05D004679 ORTHO05D005524 5.3e-25 119.4 266 37.6
AUR62035202 Chenopodium quinoa HOM05D004679 ORTHO05D005524 3.8e-23 113.2 206 40.3
Eucgr.D00333 Eucalyptus grandis HOM05D004679 ORTHO05D005524 1.9e-22 110.9 197 42.6
CDE06G1731 Ceratophyllum demersum HOM05D004679 ORTHO05D005524 3.2e-22 110.2 315 27.6
HanXRQChr16g0529431 Helianthus annuus HOM05D004679 ORTHO05D005524 1.6e-21 107.8 272 39.7
Phvul.007G028300 Phaseolus vulgaris HOM05D004679 ORTHO05D005524 2.1e-21 107.5 184 38.0
Eucgr.G02311 Eucalyptus grandis HOM05D004679 ORTHO05D005524 1.3e-20 104.8 312 34.3
DCAR_030166 Daucus carota HOM05D004679 ORTHO05D005524 1.9e-19 100.9 295 33.6
Medtr1g110550 Medicago truncatula HOM05D004679 ORTHO05D005524 2.5e-19 100.5 258 41.5
VMungo0720G2998 Vigna mungo HOM05D004679 ORTHO05D005524 2.5e-19 100.5 267 38.2
Lalb_Chr21g0308861 Lupinus albus HOM05D004679 ORTHO05D005524 4.3e-19 99.8 279 35.5
PSO017G6556 Papaver somniferum HOM05D004679 ORTHO05D005524 5.8e-16 89.4 284 39.4
Peaxi162Scf00753g00057 Petunia axillaris HOM05D004679 ORTHO05D005524 3.0e-12 77.0 322 26.1
Lalb_Chr06g0166021 Lupinus albus HOM05D004679 ORTHO05D005524 1.5e-11 74.7 315 30.8
Lj5g0021418 Lotus japonicus HOM05D004679 ORTHO05D005524 6.2e-10 69.3 154 35.7
unitig_26.g10255 Utricularia gibba HOM05D004679 ORTHO05D005524 5.3e-09 66.2 214 28.0


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