Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 8.3e-199 696.8 346 100.0
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 3.4e-176 621.7 424 76.9
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 8.2e-146 520.8 337 79.2
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 4.3e-139 498.4 344 74.1
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 9.0e-137 490.7 311 78.8
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.5e-136 490.0 311 78.5
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 1.5e-136 490.0 331 75.2
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 2.6e-136 489.2 336 75.0
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.2e-135 486.1 329 74.5
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 2.9e-135 485.7 334 73.1
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 5.0e-135 485.0 337 74.2
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 6.5e-135 484.6 333 74.2
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 8.5e-135 484.2 333 74.5
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 7.2e-134 481.1 333 73.9
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 7.9e-133 477.6 333 71.8
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 7.9e-133 477.6 316 75.3
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 7.9e-133 477.6 338 72.2
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 2.3e-132 476.1 319 75.9
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 6.7e-132 474.6 326 73.0
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 6.7e-132 474.6 331 72.8
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 8.8e-132 474.2 330 73.0
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 1.1e-131 473.8 317 76.3
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.3e-130 470.3 398 63.6
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 3.7e-130 468.8 335 71.6
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 6.3e-130 468.0 338 68.0
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.1e-129 467.2 337 71.2
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 1.4e-129 466.8 284 77.8
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.8e-129 466.5 279 77.8
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 4.1e-129 465.3 323 72.1
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 4.1e-129 465.3 296 77.4
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.2e-128 463.8 325 72.3
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.6e-128 462.6 300 73.7
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 2.6e-128 462.6 338 70.7
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 2.6e-128 462.6 332 70.2
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 3.4e-128 462.2 339 72.0
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 4.5e-128 461.8 323 71.5
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 1.0e-127 460.7 334 69.8
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.7e-127 459.9 333 70.3
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 2.2e-127 459.5 283 77.4
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 2.9e-127 459.1 326 70.9
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.1e-126 457.2 322 72.0
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 1.9e-126 456.4 300 73.7
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 2.5e-126 456.1 332 69.0
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 5.5e-126 454.9 296 74.7
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 7.2e-126 454.5 332 69.6
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 1.2e-125 453.8 307 71.7
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.6e-125 453.4 332 68.7
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 2.1e-125 453.0 333 68.8
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 2.1e-125 453.0 331 69.8
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 5.1e-124 448.4 315 71.7
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 8.8e-124 447.6 342 65.2
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 8.8e-124 447.6 320 69.1
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 2.6e-123 446.0 325 70.8
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 2.6e-123 446.0 302 72.2
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 3.3e-123 445.7 301 73.1
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 4.4e-123 445.3 326 67.5
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 9.7e-123 444.1 324 68.5
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 3.7e-122 442.2 337 66.8
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 4.8e-122 441.8 308 72.4
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 6.3e-122 441.4 337 66.8
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 1.1e-121 440.7 330 68.2
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 2.4e-121 439.5 282 74.8
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 2.4e-121 439.5 337 66.5
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.1e-121 439.1 284 71.8
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 6.9e-121 438.0 301 71.8
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 9.1e-121 437.6 312 69.9
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 1.5e-120 436.8 282 75.2
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.5e-120 436.8 314 68.8
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.0e-120 436.4 334 67.1
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 2.0e-120 436.4 327 66.7
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 2.6e-120 436.0 325 68.0
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 5.9e-120 434.9 312 68.9
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 5.9e-120 434.9 310 69.7
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.0e-119 434.1 331 65.6
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.3e-119 433.7 310 70.3
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 1.7e-119 433.3 329 66.3
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 6.5e-119 431.4 331 66.5
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 8.5e-119 431.0 323 67.2
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 6.1e-117 424.9 255 80.0
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 8.0e-117 424.5 283 73.9
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 3.0e-116 422.5 298 70.5
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 5.2e-116 421.8 372 59.9
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 7.4e-115 417.9 280 73.6
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 2.2e-114 416.4 348 63.5
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 8.2e-114 414.5 413 54.7
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 9.1e-113 411.0 260 75.8
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 1.5e-110 403.7 324 62.7
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 2.5e-110 402.9 269 70.6
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 3.2e-110 402.5 272 73.5
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 3.0e-108 396.0 230 81.3
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 6.3e-106 388.3 320 62.5
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.6e-101 373.6 322 62.4
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 3.3e-94 349.4 312 55.4
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 3.6e-93 345.9 283 57.2
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 6.3e-90 335.1 306 59.8
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 8.3e-90 334.7 329 55.6
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 3.1e-89 332.8 275 61.1
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 1.9e-86 323.6 323 56.3
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.5e-86 323.2 260 57.3
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 2.0e-83 313.5 266 54.9
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 6.0e-80 302.0 279 56.6
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.6e-72 277.3 157 77.1
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 5.2e-68 262.3 186 67.7
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 4.6e-64 249.2 147 81.0
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 5.8e-59 232.3 163 73.6
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.9e-57 227.3 134 78.4
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 2.4e-57 226.9 135 78.5
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 6.6e-55 218.8 271 41.7
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 8.4e-50 201.8 216 50.5
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.1e-46 191.4 134 63.4
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 4.9e-42 176.0 115 75.7
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 8.7e-31 138.7 276 33.7
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 5.6e-30 136.0 316 27.2
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.6e-29 134.4 309 32.7
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 3.8e-18 96.7 98 48.0
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.0e-14 84.3 99 47.5
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.3e-12 76.3 52 63.5


User provided reference genes

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