Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G111500 Populus trichocarpa HOM05D007408 ORTHO05D009325 2.9e-117 425.2 213 100.0
Sabra08G0084200 Salix brachista HOM05D007408 ORTHO05D009325 7.9e-59 231.1 137 88.3
Manes.06G075900 Manihot esculenta HOM05D007408 ORTHO05D009325 1.1e-39 167.5 154 59.7
TWI79G0837 Tripterygium wilfordii HOM05D007408 ORTHO05D009325 1.2e-38 164.1 152 59.9
CiPaw.06G098200 Carya illinoinensis HOM05D007408 ORTHO05D009325 2.6e-33 146.4 164 55.5
Atru.chr11.1432 Acer truncatum HOM05D007408 ORTHO05D009325 4.4e-33 145.6 163 54.6
Cfa008792 Carpinus fangiana HOM05D007408 ORTHO05D009325 2.8e-32 142.9 156 54.5
Prupe.1G301300 Prunus persica HOM05D007408 ORTHO05D009325 4.5e-30 135.6 155 49.7
MD13G1050800 Malus domestica HOM05D007408 ORTHO05D009325 5.9e-30 135.2 151 51.0
Haze_11804 Corylus avellana HOM05D007408 ORTHO05D009325 1.5e-28 130.6 122 62.3
Glyma.16G099500 Glycine max HOM05D007408 ORTHO05D009325 1.5e-28 130.6 154 47.4
Cc11_g10990 Coffea canephora HOM05D007408 ORTHO05D009325 8.0e-27 124.8 146 46.6
RcHm_v2.0_Chr4g0436431 Rosa chinensis HOM05D007408 ORTHO05D009325 1.8e-26 123.6 150 48.7
Thecc.02G364900 Theobroma cacao HOM05D007408 ORTHO05D009325 2.0e-25 120.2 124 56.5
DCAR_026703 Daucus carota HOM05D002818 ORTHO05D003244 9.8e-25 117.9 156 48.7
FAN17G1226 Fragaria x ananassa HOM05D000085 ORTHO05D000274 1.3e-24 117.5 143 48.3
FAN12G0389 Fragaria x ananassa HOM05D000085 ORTHO05D000274 2.2e-24 116.7 191 41.4
CANSAT64G2960 Cannabis sativa HOM05D007408 ORTHO05D009325 3.7e-24 115.9 133 52.6
Phvul.003G281600 Phaseolus vulgaris HOM05D007408 ORTHO05D009325 4.9e-24 115.5 160 45.0
Cpa.g.sc1.248 Carica papaya HOM05D007408 ORTHO05D009325 6.4e-24 115.2 150 46.0
Eucgr.B03072 Eucalyptus grandis HOM05D007408 ORTHO05D009325 6.4e-24 115.2 156 42.9
Lalb_Chr20g0122411 Lupinus albus HOM05D007408 ORTHO05D009325 6.4e-24 115.2 152 44.7
VMungo0251G2162 Vigna mungo HOM05D007408 ORTHO05D009325 6.4e-24 115.2 130 50.8
Lj4g0027659 Lotus japonicus HOM05D007408 ORTHO05D009325 8.3e-24 114.8 150 45.3
Oeu024124.1 Olea europaea HOM05D007408 ORTHO05D009325 8.3e-24 114.8 146 45.9
FAN07G2148 Fragaria x ananassa HOM05D000085 ORTHO05D000274 1.1e-23 114.4 126 50.8
THA.LOC104805235 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 1.1e-23 114.4 156 42.3
SGA_v2.0_scaffold36G14509 Striga asiatica HOM05D007408 ORTHO05D009325 1.8e-23 113.6 121 52.9
FAN22G2286 Fragaria x ananassa HOM05D000227 ORTHO05D001491 2.4e-23 113.2 139 48.9
Gohir.A12G173800 Gossypium hirsutum HOM05D007408 ORTHO05D009325 3.2e-23 112.8 148 50.0
PGR119G0146 Punica granatum HOM05D007408 ORTHO05D009325 2.0e-22 110.2 152 44.7
Gohir.D12G176300 Gossypium hirsutum HOM05D007408 ORTHO05D009325 1.7e-21 107.1 147 49.0
Gorai.008G188700 Gossypium raimondii HOM05D007408 ORTHO05D009325 1.7e-21 107.1 147 49.0
Migut.L01119 Erythranthe guttata HOM05D007408 ORTHO05D009325 1.5e-20 104.0 152 42.1
arahy.Tifrunner.gnm1.ann1.24G1QJ Arachis hypogaea HOM05D007408 ORTHO05D009325 1.9e-20 103.6 144 43.8
TPR.G24816 Trifolium pratense HOM05D007408 ORTHO05D009325 2.5e-20 103.2 157 42.7
TAR629G0610 Trochodendron aralioides HOM05D007408 ORTHO05D009325 2.5e-20 103.2 149 43.0
Manes.14G095101 Manihot esculenta HOM05D007408 ORTHO05D009325 3.3e-20 102.8 91 61.5
A02p33920 Brassica napus HOM05D007408 ORTHO05D009325 5.6e-20 102.1 154 44.2
HanXRQChr17g0551421 Helianthus annuus HOM05D007408 ORTHO05D009325 7.3e-20 101.7 148 45.3
Ciclev10033573m.g Citrus clementina HOM05D007408 ORTHO05D009325 1.2e-19 100.9 117 53.0
Medtr8g069910 Medicago truncatula HOM05D007408 ORTHO05D009325 1.2e-19 100.9 145 42.8
BraA02t08410Z Brassica rapa HOM05D007408 ORTHO05D009325 2.1e-19 100.1 150 44.0
Sp2g14870 Schrenkiella parvula HOM05D007408 ORTHO05D009325 2.1e-19 100.1 149 42.3
BcaC06g31130 Brassica carinata HOM05D007408 ORTHO05D009325 6.2e-19 98.6 150 40.7
Thhalv10005058m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 6.2e-19 98.6 149 43.6
Psat4g113200 Pisum sativum HOM05D007408 ORTHO05D009325 1.0e-18 97.8 145 42.8
BcaC03g17274 Brassica carinata HOM05D007408 ORTHO05D009325 2.3e-18 96.7 150 42.0
C02p52180 Brassica napus HOM05D007408 ORTHO05D009325 2.3e-18 96.7 150 42.0
BolC2t11303H Brassica oleracea HOM05D007408 ORTHO05D009325 2.3e-18 96.7 150 42.0
CARHR146570 Cardamine hirsuta HOM05D007408 ORTHO05D009325 2.3e-18 96.7 148 41.9
A06p42710 Brassica napus HOM05D007408 ORTHO05D009325 6.8e-18 95.1 149 41.6
BraA06t27184Z Brassica rapa HOM05D007408 ORTHO05D009325 6.8e-18 95.1 149 41.6
AL5G14110 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 1.5e-17 94.0 150 41.3
BcaB07g30265 Brassica carinata HOM05D007408 ORTHO05D009325 2.0e-17 93.6 150 43.3
BcaC06g33976 Brassica carinata HOM05D007408 ORTHO05D009325 2.0e-17 93.6 150 40.7
C07p34420 Brassica napus HOM05D007408 ORTHO05D009325 3.4e-17 92.8 150 40.7
AT3G25597 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 5.8e-17 92.0 150 42.0
HanXRQChr15g0475971 Helianthus annuus HOM05D007408 ORTHO05D009325 1.3e-16 90.9 126 42.1
Sc11g0002930 Simmondsia chinensis HOM05D007408 ORTHO05D009325 1.3e-16 90.9 155 40.0
Carub.0005s0338 Capsella rubella HOM05D007408 ORTHO05D009325 2.2e-16 90.1 150 40.7
THA.LOC104822179 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 2.2e-16 90.1 120 42.5
SalBow8G1270 Salvia bowleyana HOM05D007408 ORTHO05D009325 2.9e-16 89.7 149 39.6
SalBow8G3082 Salvia bowleyana HOM05D007408 ORTHO05D009325 2.9e-16 89.7 149 39.6
Solyc05g010130.1 Solanum lycopersicum HOM05D007408 ORTHO05D009325 8.3e-16 88.2 118 44.9
Ah.02g127260 Amaranthus hybridus HOM05D007408 ORTHO05D009325 1.4e-15 87.4 140 39.3
Lsat_1_v5_gn_3_60200 Lactuca sativa HOM05D007408 ORTHO05D009325 7.0e-15 85.1 122 41.0
AT1G68700 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 1.6e-14 84.0 143 37.8
PSO782G1144 Papaver somniferum HOM05D007408 ORTHO05D009325 2.0e-14 83.6 123 43.9
BcaC08g46321 Brassica carinata HOM05D000085 ORTHO05D000274 2.7e-14 83.2 155 35.5
BolC6t39308H Brassica oleracea HOM05D000085 ORTHO05D000274 2.7e-14 83.2 155 35.5
C06p41170 Brassica napus HOM05D000085 ORTHO05D000274 3.5e-14 82.8 155 34.8
Aqoxy3G03838 Aquilegia oxysepala HOM05D007408 ORTHO05D009325 4.6e-14 82.4 157 39.5
CARHR061510 Cardamine hirsuta HOM05D007408 ORTHO05D009325 6.0e-14 82.0 153 34.6
CsaV3_2G010890 Cucumis sativus L. HOM05D007408 ORTHO05D009325 1.3e-13 80.9 150 36.0
A07p35100 Brassica napus HOM05D000085 ORTHO05D000274 2.3e-13 80.1 155 34.2
BraA07t31103Z Brassica rapa HOM05D000085 ORTHO05D000274 2.3e-13 80.1 155 34.2
BcaB03g15828 Brassica carinata HOM05D007408 ORTHO05D009325 3.0e-13 79.7 146 34.2
BcaB03g15446 Brassica carinata HOM05D007408 ORTHO05D009325 6.6e-13 78.6 150 34.7
Sed0018728 Sechium edule HOM05D007408 ORTHO05D009325 1.9e-12 77.0 122 41.0
Sp5g23800 Schrenkiella parvula HOM05D007408 ORTHO05D009325 2.5e-12 76.6 144 31.2
HanXRQChr12g0365241 Helianthus annuus HOM05D007408 ORTHO05D009325 1.6e-11 73.9 111 39.6
AL1G39610 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 4.7e-11 72.4 115 35.7
Thhalv10009687m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 4.7e-11 72.4 117 36.8
BcaC05g26429 Brassica carinata HOM05D007408 ORTHO05D009325 6.2e-11 72.0 115 37.4
C05p24760 Brassica napus HOM05D007408 ORTHO05D009325 6.2e-11 72.0 136 34.6
C06p37420 Brassica napus HOM05D007408 ORTHO05D009325 6.2e-11 72.0 145 35.2
A08p27160 Brassica napus HOM05D007408 ORTHO05D009325 1.4e-10 70.9 115 36.5
A07p31850 Brassica napus HOM05D007408 ORTHO05D009325 1.8e-10 70.5 123 37.4
Sp1g22520 Schrenkiella parvula HOM05D007408 ORTHO05D009325 1.8e-10 70.5 124 37.9
MELO3C020393.2 Cucumis melo HOM05D007408 ORTHO05D009325 2.3e-10 70.1 151 33.8
C03p72700 Brassica napus HOM05D007408 ORTHO05D009325 3.1e-10 69.7 115 35.7
BolC3t19568H Brassica oleracea HOM05D007408 ORTHO05D009325 3.1e-10 69.7 115 35.7
BraA07t30814Z Brassica rapa HOM05D007408 ORTHO05D009325 3.1e-10 69.7 123 37.4
BraA08t34661Z Brassica rapa HOM05D007408 ORTHO05D009325 5.2e-10 68.9 115 36.5
CARHR025780 Cardamine hirsuta HOM05D007408 ORTHO05D009325 6.8e-10 68.6 117 35.0
A09p39710 Brassica napus HOM05D007408 ORTHO05D009325 2.0e-09 67.0 117 36.8
BolC7t43970H Brassica oleracea HOM05D007408 ORTHO05D009325 2.6e-09 66.6 107 41.1
AT1G26140 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 3.4e-09 66.2 131 32.1
BraA09t39470Z Brassica rapa HOM05D007408 ORTHO05D009325 3.4e-09 66.2 151 31.8
Carub.0002s1524 Capsella rubella HOM05D007408 ORTHO05D009325 3.4e-09 66.2 107 36.4
PSO063G0414 Papaver somniferum HOM05D007408 ORTHO05D009325 3.4e-09 66.2 156 34.6
Peaxi162Scf00198g00024 Petunia axillaris HOM05D007408 ORTHO05D009325 1.7e-08 63.9 70 47.1
Carub.0001s2482 Capsella rubella HOM05D007408 ORTHO05D009325 3.7e-08 62.8 115 33.0
BolC6t38845H Brassica oleracea HOM05D000085 ORTHO05D000274 1.1e-07 61.2 119 35.3
HPP92_003114 Vanilla planifolia HOM05D007408 ORTHO05D009325 2.7e-06 56.6 116 36.2


User provided reference genes

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