Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 6.3e-131 470.7 226 100.0
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 4.4e-116 421.4 226 89.8
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 4.6e-97 358.2 219 74.0
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 3.5e-89 332.0 221 68.8
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 5.1e-88 328.2 221 68.3
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 1.9e-87 326.2 219 68.9
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 2.5e-87 325.9 221 67.9
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.6e-86 323.2 215 68.8
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 3.6e-86 322.0 219 67.1
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 3.1e-85 318.9 221 67.9
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 3.1e-85 318.9 218 67.4
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 4.0e-85 318.5 217 67.3
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 2.6e-84 315.8 218 67.0
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 3.4e-84 315.5 223 64.6
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 3.4e-84 315.5 215 67.9
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 3.4e-84 315.5 220 64.5
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 5.8e-84 314.7 218 67.0
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 7.6e-84 314.3 219 65.8
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 2.9e-83 312.4 217 66.8
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 3.8e-83 312.0 222 63.1
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 4.9e-83 311.6 216 66.2
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 6.4e-83 311.2 227 64.8
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 6.4e-83 311.2 218 64.2
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 8.4e-83 310.8 218 64.7
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 1.9e-82 309.7 214 64.5
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 3.2e-82 308.9 216 65.7
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 3.2e-82 308.9 220 65.9
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 3.2e-82 308.9 214 65.4
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 3.2e-82 308.9 214 64.5
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 4.2e-82 308.5 237 61.6
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 4.2e-82 308.5 234 62.8
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 5.4e-82 308.1 217 65.4
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 7.1e-82 307.8 215 67.4
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 7.1e-82 307.8 214 67.8
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 7.1e-82 307.8 216 64.8
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 7.1e-82 307.8 218 65.1
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 9.3e-82 307.4 219 63.9
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 9.3e-82 307.4 220 64.1
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 9.3e-82 307.4 220 64.1
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 1.6e-81 306.6 216 63.4
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 1.6e-81 306.6 204 70.1
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 2.1e-81 306.2 214 67.3
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.7e-81 305.8 214 64.5
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 3.5e-81 305.4 221 65.6
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 3.5e-81 305.4 215 64.7
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 4.6e-81 305.1 215 67.9
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 7.8e-81 304.3 214 63.6
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 1.0e-80 303.9 217 63.6
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 1.0e-80 303.9 218 62.8
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 1.3e-80 303.5 216 65.3
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 3.0e-80 302.4 213 65.3
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 3.0e-80 302.4 220 63.2
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 6.6e-80 301.2 212 65.6
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 1.1e-79 300.4 220 61.4
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 1.1e-79 300.4 223 61.9
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 1.1e-79 300.4 223 61.9
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 1.1e-79 300.4 223 61.9
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 1.9e-79 299.7 220 61.4
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 2.5e-79 299.3 217 62.7
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 4.3e-79 298.5 222 61.7
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 5.6e-79 298.1 217 61.3
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 7.3e-79 297.7 223 61.0
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 7.3e-79 297.7 219 62.6
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 7.3e-79 297.7 217 65.0
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 9.6e-79 297.4 222 61.3
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 1.6e-78 296.6 220 61.4
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 1.6e-78 296.6 222 61.3
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 1.6e-78 296.6 215 63.3
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.6e-78 296.6 214 63.1
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 2.1e-78 296.2 223 60.1
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 2.8e-78 295.8 223 60.1
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 6.2e-78 294.7 214 62.6
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 8.1e-78 294.3 217 62.7
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 1.1e-77 293.9 220 61.8
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 1.1e-77 293.9 210 62.4
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 1.8e-77 293.1 215 62.3
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 4.0e-77 292.0 217 61.8
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 9.0e-77 290.8 223 58.7
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 1.5e-76 290.0 184 71.7
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 1.7e-75 286.6 215 62.3
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 1.1e-74 283.9 211 61.6
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.1e-74 283.9 215 59.5
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 7.1e-74 281.2 217 59.0
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 4.6e-73 278.5 250 54.0
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 2.3e-72 276.2 209 61.7
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 2.3e-72 276.2 274 50.4
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 2.5e-71 272.7 209 61.7
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 9.6e-71 270.8 208 60.1
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 1.6e-70 270.0 200 63.0
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 2.1e-70 269.6 223 57.4
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 2.8e-70 269.2 209 60.8
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 2.8e-70 269.2 208 60.1
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 3.6e-70 268.9 218 58.3
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 5.8e-68 261.5 214 56.1
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 4.2e-66 255.4 175 68.6
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 4.2e-66 255.4 217 56.2
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 5.1e-64 248.4 174 67.8
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 7.4e-63 244.6 175 63.4
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 8.1e-62 241.1 210 56.2
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 6.9e-61 238.0 184 61.4
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 4.5e-60 235.3 215 53.0
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 2.9e-59 232.6 175 59.4
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 4.9e-59 231.9 215 52.6
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 5.5e-58 228.4 216 50.0
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 4.6e-57 225.3 216 50.0
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 1.8e-56 223.4 213 49.3
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 3.9e-56 222.2 215 45.6
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 5.3e-53 211.8 153 63.4
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 9.0e-53 211.1 210 51.0
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 2.6e-52 209.5 157 64.3
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 6.5e-51 204.9 207 48.8
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 1.4e-50 203.8 159 59.7
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 1.1e-47 194.1 208 45.7
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 1.9e-47 193.4 187 52.4
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 4.1e-45 185.7 137 61.3
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 2.0e-39 166.8 164 52.4
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.0e-35 154.5 113 63.7
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 5.3e-29 132.1 222 31.1
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 2.7e-25 119.8 82 63.4
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 2.7e-25 119.8 112 55.4
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 1.4e-21 107.5 93 51.6
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 3.1e-21 106.3 221 29.4
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 1.4e-13 80.9 55 69.1
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 5.0e-11 72.4 96 45.8
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 8.5e-11 71.6 76 47.4
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 4.7e-09 65.9 68 41.2
PSO782G2289 Papaver somniferum HOM05D000256 ORTHO05D000119 1.2e-07 61.2 46 54.3


User provided reference genes

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