Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 1.1e-99 366.7 187 100.0
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 1.2e-79 300.1 195 83.1
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 1.9e-64 249.6 180 71.1
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 3.6e-63 245.4 183 69.9
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 3.0e-62 242.3 183 67.8
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 4.4e-61 238.4 192 65.1
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 9.7e-61 237.3 189 67.2
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 2.8e-60 235.7 190 65.8
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 3.7e-60 235.3 189 65.6
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 4.8e-60 235.0 191 64.9
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 1.4e-59 233.4 198 62.1
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 1.4e-59 233.4 187 66.8
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 1.8e-59 233.0 185 67.0
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 1.8e-59 233.0 190 65.8
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 7.0e-59 231.1 198 62.1
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 9.1e-59 230.7 183 66.1
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 1.6e-58 229.9 185 66.5
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 2.0e-58 229.6 179 68.7
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 2.0e-58 229.6 193 63.2
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 2.0e-58 229.6 185 65.9
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 2.0e-58 229.6 184 66.8
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 3.8e-57 225.3 186 63.4
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 5.0e-57 224.9 185 61.1
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 5.0e-57 224.9 159 75.5
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 1.5e-56 223.4 190 63.7
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 4.2e-56 221.9 191 58.6
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 2.7e-55 219.2 173 65.3
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 3.6e-55 218.8 185 59.5
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 1.0e-54 217.2 187 65.8
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 1.0e-54 217.2 185 60.5
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 2.3e-54 216.1 160 64.4
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 2.3e-54 216.1 170 64.1
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 3.0e-54 215.7 187 62.6
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 3.0e-54 215.7 215 56.7
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 8.8e-54 214.2 178 61.2
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 2.0e-53 213.0 137 75.9
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 2.6e-53 212.6 192 60.9
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 3.4e-53 212.2 188 60.6
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 7.5e-53 211.1 185 62.2
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 2.2e-52 209.5 201 56.7
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 8.3e-52 207.6 190 58.4
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 1.1e-51 207.2 193 58.5
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 1.8e-51 206.5 185 58.4
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 1.8e-51 206.5 190 57.9
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 3.1e-51 205.7 194 57.7
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 7.0e-51 204.5 192 58.3
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 7.0e-51 204.5 192 58.3
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 3.5e-50 202.2 189 57.7
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 4.5e-50 201.8 158 69.6
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 1.0e-49 200.7 223 50.7
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 1.3e-49 200.3 188 58.5
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 1.7e-49 199.9 160 60.6
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 6.5e-49 198.0 172 57.6
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 8.5e-49 197.6 186 55.4
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 8.5e-49 197.6 185 57.3
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 3.2e-48 195.7 205 54.6
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 7.2e-48 194.5 183 57.9
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 1.2e-47 193.7 179 57.0
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 4.7e-47 191.8 187 52.9
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 8.0e-47 191.0 185 56.8
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 4.0e-46 188.7 184 56.0
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 5.2e-46 188.3 187 55.1
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 2.0e-45 186.4 188 54.3
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 3.4e-45 185.7 161 62.1
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 7.5e-45 184.5 192 53.6
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 9.8e-45 184.1 166 57.2
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 1.3e-44 183.7 167 61.1
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 1.3e-44 183.7 188 52.7
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 2.8e-44 182.6 157 57.3
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 1.1e-43 180.6 192 53.6
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 3.1e-43 179.1 184 54.3
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 7.0e-43 177.9 211 48.8
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 9.1e-43 177.6 143 58.7
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 9.1e-43 177.6 202 49.5
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 1.2e-42 177.2 190 51.6
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 1.7e-41 173.3 190 50.5
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 2.5e-40 169.5 171 53.2
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 2.5e-40 169.5 190 50.0
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 3.3e-40 169.1 192 51.0
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 9.5e-40 167.5 193 49.7
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 4.7e-39 165.2 191 48.7
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 4.7e-39 165.2 168 51.8
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 8.0e-39 164.5 102 79.4
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 1.4e-38 163.7 178 50.6
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 3.0e-38 162.5 141 56.0
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 1.5e-37 160.2 102 78.4
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 7.0e-35 151.4 131 62.6
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 3.3e-32 142.5 155 50.3
Cc11_g16590 Coffea canephora HOM05D006725 ORTHO05D008223 4.9e-28 128.6 82 74.4
Nitab4.5_0000240g0060 Nicotiana tabacum HOM05D006725 ORTHO05D008223 6.4e-28 128.3 85 70.6
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 3.2e-27 125.9 135 56.3
SalBow3G4645 Salvia bowleyana HOM05D006725 ORTHO05D008223 5.4e-27 125.2 101 59.4
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 7.0e-27 124.8 185 45.4
ECA234G0356 Erigeron canadensis HOM05D006725 ORTHO05D008223 1.0e-25 120.9 112 60.7
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 8.6e-25 117.9 76 75.0
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 7.3e-24 114.8 72 79.2
FvH4_4g24330 Fragaria vesca HOM05D006725 ORTHO05D008223 2.8e-23 112.8 100 61.0
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 3.6e-23 112.5 93 58.1
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 1.8e-22 110.2 149 45.6
Oeu041686.1 Olea europaea HOM05D006725 ORTHO05D008223 1.7e-20 103.6 100 58.0
CAN.G1081.12 Capsicum annuum HOM05D006725 ORTHO05D008223 2.9e-20 102.8 73 64.4
CAN.G3094.1 Capsicum annuum HOM05D006725 ORTHO05D008223 2.9e-20 102.8 73 64.4
MBI08_g41741_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 1.1e-19 100.9 57 82.5
Atru.chr7.1050 Acer truncatum HOM05D006725 ORTHO05D008223 7.1e-19 98.2 73 65.8
Pp3c8_14070 Physcomitrium patens HOM05D006725 ORTHO05D008223 1.2e-18 97.4 113 38.1
Cpa.g.sc351.2 Carica papaya HOM05D006725 ORTHO05D008223 2.7e-18 96.3 177 37.9
SMO141G0262 Selaginella moellendorffii HOM05D006725 ORTHO05D008223 6.0e-18 95.1 105 37.1
CAN.G1081.11 Capsicum annuum HOM05D006725 ORTHO05D008223 7.8e-18 94.7 98 52.0
CAN.G3094.2 Capsicum annuum HOM05D006725 ORTHO05D008223 7.8e-18 94.7 98 52.0
CDE02G2623 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 2.3e-17 93.2 101 54.5
Actinidia30676 Actinidia chinensis HOM05D006725 ORTHO05D008223 3.3e-16 89.4 107 43.9
CBR_g17596 Chara braunii HOM05D006725 ORTHO05D008223 7.3e-16 88.2 106 37.7
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla HOM05D006725 ORTHO05D008223 1.4e-14 84.0 51 72.5
RcHm_v2.0_Chr1g0366581 Rosa chinensis HOM05D006725 ORTHO05D008223 8.9e-14 81.3 52 78.8
RcHm_v2.0_Chr3g0456071 Rosa chinensis HOM05D006725 ORTHO05D008223 1.5e-13 80.5 51 78.4
RcHm_v2.0_Chr7g0183971 Rosa chinensis HOM05D006725 ORTHO05D008223 2.0e-13 80.1 52 76.9
MBI08_g41742_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 1.1e-11 74.3 90 50.0
MCO03G004 Micromonas commoda HOM05D006725 ORTHO05D008223 1.6e-10 70.5 113 30.1
SpUn0282_0010 Schrenkiella parvula HOM05D006725 ORTHO05D008223 1.7e-09 67.0 56 55.4
arahy.Tifrunner.gnm1.ann1.02S1KF Arachis hypogaea HOM05D003716 ORTHO05D010944 3.1e-06 56.2 32 84.4


User provided reference genes

Program Settings